FFCP PHASE1:Hg19::chr17:995272..995296,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:995272..995296,-
|short_description=p23@ABR
|description=CAGE_peak_23_at_ABR_5end
|association_with_transcript=-172bp_to_uc002fsh.1_5end
|EntrezGene=29
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=29 | |EntrezGene=29 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=81 | |HGNC=81 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZT60 | |UniProt=Q6ZT60 | ||
|association_with_transcript=-172bp_to_uc002fsh.1_5end | |||
|cluster_id=chr17:995272..995296,- | |||
|description=CAGE_peak_23_at_ABR_5end | |||
|id=chr17:995272..995296,- | |||
|ontology_enrichment_celltype=CL:0002623!1.34e-12!3;CL:0000622!1.04e-07!5;CL:0002368!6.65e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0000840;6.96e-24;5!CL:0002623;5.47e-21;3!CL:0000990;3.70e-16;8!CL:0000451;2.44e-13;10!CL:0000622;5.27e-13;5!CL:0000154;5.36e-11;6!CL:0000150;1.25e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,7.24e-24,5;CL:0001029,7.24e-24,5;CL:0002623,6.05e-21,3;CL:0000990,3.80e-16,8;CL:0000451,2.50e-13,10;CL:0000622,5.60e-13,5;CL:0000154,5.64e-11,6;CL:0000150,1.29e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0009143;5.11e-17;1!UBERON:0008814;7.49e-09;2!UBERON:0010056;7.49e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001044!5.34e-23!6;UBERON:0003293!5.34e-23!6;UBERON:0003294!5.34e-23!6;UBERON:0010047!5.34e-23!6;UBERON:0000167!5.34e-23!6;UBERON:0003408!7.89e-23!10;UBERON:0001004!1.06e-17!72;UBERON:0000166!1.64e-16!21;UBERON:0000078!5.11e-16!18;UBERON:0007023!7.39e-14!115;UBERON:0000161!4.40e-13!35;UBERON:0000165!7.24e-12!28;UBERON:0000930!7.24e-12!28;UBERON:0001041!1.46e-10!98;UBERON:0000065!1.60e-10!53;UBERON:0000464!1.27e-09!104;UBERON:0004119!2.14e-09!169;UBERON:0000925!2.14e-09!169;UBERON:0006595!2.14e-09!169;UBERON:0001042!4.59e-09!10;UBERON:0009145!4.59e-09!10;UBERON:0001444!7.81e-09!48;UBERON:0003127!8.75e-09!2;UBERON:0001829!1.06e-08!2;UBERON:0000077!1.24e-08!130;UBERON:0004921!1.24e-08!129;UBERON:0004185!1.24e-08!129;UBERON:0006562!3.27e-08!11;UBERON:0001007!5.16e-08!155;UBERON:0001555!5.16e-08!155;UBERON:0007026!5.16e-08!155;UBERON:0000466!3.74e-07!126 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;6.47e-17;1!UBERON:0001961;6.47e-17;1!UBERON:0001744;6.47e-17;1!UBERON:0001042;6.47e-17;1!UBERON:0001735;6.47e-17;1!UBERON:0001044;5.36e-11;6!UBERON:0003293;5.36e-11;6!UBERON:0003294;5.36e-11;6!UBERON:0010047;5.36e-11;6!UBERON:0003408;5.36e-11;6!UBERON:0000167;5.36e-11;6!UBERON:0001041;2.00e-10;14!UBERON:0003126;1.04e-09;7!UBERON:0001005;1.04e-09;7!UBERON:0006562;4.02e-09;2!UBERON:0003127;5.49e-09;2!UBERON:0000341;5.49e-09;2!UBERON:0000165;5.65e-09;28!UBERON:0000161;8.19e-08;19!UBERON:0000166;8.19e-08;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,6.47e-17,1;UBERON:0001961,6.47e-17,1;UBERON:0001744,6.47e-17,1;UBERON:0001735,6.47e-17,1;UBERON:0000166,2.34e-11,22;UBERON:0001044,5.64e-11,6;UBERON:0003293,5.64e-11,6;UBERON:0003294,5.64e-11,6;UBERON:0010047,5.64e-11,6;UBERON:0000167,5.64e-11,6;UBERON:0003126,1.04e-09,7;UBERON:0001005,1.04e-09,7;UBERON:0003127,5.08e-09,2;UBERON:0000341,5.49e-09,2;UBERON:0000165,1.11e-08,29;UBERON:0000930,1.11e-08,29;UBERON:0001041,3.73e-08,87;UBERON:0001004,3.63e-07,74;UBERON:0001042,4.39e-07,10;UBERON:0009145,4.39e-07,10;UBERON:0000161,4.87e-07,36;UBERON:0003408,6.12e-07,10 | |||
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| ||
|short_description=p23@ABR | |||
}} | }} |
Latest revision as of 17:43, 18 September 2015
Short description: | p23@ABR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_ABR_5end |
Coexpression cluster: | NA |
Association with transcript: | -172bp_to_uc002fsh.1_5end |
EntrezGene: | ABR |
HGNC: | 81 |
UniProt: | Q6ZT60 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 7.24e-24 | 5 |
common dendritic progenitor | 7.24e-24 | 5 |
acinar cell of salivary gland | 6.05e-21 | 3 |
conventional dendritic cell | 3.80e-16 | 8 |
dendritic cell | 2.50e-13 | 10 |
acinar cell | 5.60e-13 | 5 |
protein secreting cell | 5.64e-11 | 6 |
glandular epithelial cell | 1.29e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
tonsil | 6.47e-17 | 1 |
mucosa-associated lymphoid tissue | 6.47e-17 | 1 |
lymphoid tissue | 6.47e-17 | 1 |
tonsillar ring | 6.47e-17 | 1 |
oral opening | 2.34e-11 | 22 |
saliva-secreting gland | 5.64e-11 | 6 |
gland of oral region | 5.64e-11 | 6 |
gland of foregut | 5.64e-11 | 6 |
oral gland | 5.64e-11 | 6 |
oral cavity | 5.64e-11 | 6 |
trachea | 1.04e-09 | 7 |
respiratory airway | 1.04e-09 | 7 |
open tracheal system trachea | 5.08e-09 | 2 |
throat | 5.49e-09 | 2 |
mouth | 1.11e-08 | 29 |
stomodeum | 1.11e-08 | 29 |
foregut | 3.73e-08 | 87 |
respiratory system | 3.63e-07 | 74 |
chordate pharynx | 4.39e-07 | 10 |
pharyngeal region of foregut | 4.39e-07 | 10 |
orifice | 4.87e-07 | 36 |
gland of gut | 6.12e-07 | 10 |