FFCP PHASE1:Hg19::chr17:9939997..9940009,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:9939997..9940009,-
|short_description=p19@GAS7
|description=CAGE_peak_19_at_GAS7_5end
|association_with_transcript=54bp_to_ENST00000396115,NM_201432,uc002...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8522 | |EntrezGene=8522 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4169 | |HGNC=4169 | ||
|TSSclassifier=strong | |||
|UniProt=A8KAC2,O60861 | |UniProt=A8KAC2,O60861 | ||
|association_with_transcript=54bp_to_ENST00000396115,NM_201432,uc002gmj.1_5end | |||
|cluster_id=chr17:9939997..9940009,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_19_at_GAS7_5end | |||
|id=chr17:9939997..9940009,- | |||
|ontology_enrichment_celltype=CL:0000148!5.94e-07!10;CL:0000541!5.94e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000148;4.32e-11;10!CL:0000147;9.98e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,3.74e-11,10;CL:0000541,3.74e-11,10;CL:0000147,9.05e-08,14 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.11e-15;82!UBERON:0006241;3.30e-11;3!UBERON:0003057;3.30e-11;3!UBERON:0005062;1.68e-08;4!UBERON:0007284;1.68e-08;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;4.20e-08;2!DOID:114;4.51e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,4.51e-08,2;DOID:114,5.13e-07,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002780;7.88e-29;41!UBERON:0001890;7.88e-29;41!UBERON:0002619;1.30e-27;22!UBERON:0000073;1.56e-27;53!UBERON:0002616;1.56e-27;53!UBERON:0001893;5.21e-26;34!UBERON:0003528;3.71e-25;34!UBERON:0002020;3.71e-25;34!UBERON:0000956;5.35e-24;25!UBERON:0000203;5.35e-24;25!UBERON:0002791;1.10e-23;32!UBERON:0001869;2.01e-23;32!UBERON:0001950;1.02e-22;20!UBERON:0002298;1.42e-20;6!UBERON:0007023;9.97e-15;114!UBERON:0001017;1.40e-14;75!UBERON:0001016;1.11e-13;83!UBERON:0007100;2.56e-13;25!UBERON:0004732;2.49e-12;13!UBERON:0000955;2.98e-12;68!UBERON:0000988;1.88e-11;3!UBERON:0003978;3.25e-11;3!UBERON:0000946;3.25e-11;3!UBERON:0002240;3.30e-11;3!UBERON:0005174;3.30e-11;3!UBERON:0001137;3.30e-11;3!UBERON:0001896;7.38e-11;3!UBERON:0005290;7.38e-11;3!UBERON:0000349;1.71e-10;5!UBERON:0004151;4.27e-10;3!UBERON:0004733;6.63e-10;12!UBERON:0002028;6.63e-10;12!UBERON:0000125;1.72e-09;9!UBERON:0002308;1.72e-09;9!UBERON:0005162;2.25e-08;2!UBERON:0000122;2.25e-08;2!UBERON:0000200;2.37e-08;6!UBERON:0000948;2.71e-08;22!UBERON:0002148;3.42e-08;2!UBERON:0006331;3.42e-08;2!UBERON:0009662;3.42e-08;2!UBERON:0002784;3.97e-08;4!UBERON:0002133;4.82e-08;2!UBERON:0001897;5.16e-08;2!UBERON:0010225;5.16e-08;2!UBERON:0001894;6.37e-08;7!UBERON:0001871;1.67e-07;6!UBERON:0001954;2.19e-07;2!UBERON:0002081;2.19e-07;2!UBERON:0003022;2.19e-07;2!UBERON:0002421;2.19e-07;2!UBERON:0002600;2.19e-07;2!UBERON:0010314;4.69e-07;132 | |||
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| ||
|short_description=p19@GAS7 | |||
}} | }} |
Latest revision as of 17:36, 18 September 2015
Short description: | p19@GAS7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_GAS7_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 54bp_to_ENST00000396115, NM_201432, uc002gmj.1_5end |
EntrezGene: | GAS7 |
HGNC: | 4169 |
UniProt: | A8KAC2O60861 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 3.74e-11 | 10 |
melanoblast | 3.74e-11 | 10 |
pigment cell | 9.05e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
melanoma | 4.51e-08 | 2 |
heart disease | 5.13e-07 | 2 |