FFCP PHASE1:Hg19::chr12:52867616..52867640,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=286887 | |EntrezGene=286887 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20406 | |HGNC=20406 | ||
|TSSclassifier=strong | |||
|UniProt=P48668 | |UniProt=P48668 | ||
|association_with_transcript=-47bp_to_ENST00000252250,NM_173086,uc001sal.3_5end | |association_with_transcript=-47bp_to_ENST00000252250,NM_173086,uc001sal.3_5end | ||
|cluster_id=chr12:52867616..52867640,- | |||
|coexpression_cluster_id=C594 | |coexpression_cluster_id=C594 | ||
|description=CAGE_peak_2_at_KRT6C_5end | |description=CAGE_peak_2_at_KRT6C_5end | ||
|id=chr12:52867616..52867640,- | |id=chr12:52867616..52867640,- | ||
|ontology_enrichment_celltype=CL:0002159!5.81e-24!13;CL:0002076!8.80e-24!43;CL:0000622!4.03e-19!5;CL:0000223!3.68e-16!59;CL:0000154!6.82e-16!6;CL:0002251!4.55e-13!21;CL:0002368!5.27e-13!13;CL:0002166!5.35e-13!3;CL:0002621!1.38e-12!3;CL:0002328!3.92e-12!3;CL:0000066!4.39e-12!254;CL:0002623!9.05e-12!3;CL:0000150!1.68e-10!9;CL:0002077!2.67e-10!33;CL:0000575!2.29e-09!2;CL:0000317!4.36e-09!2;CL:1000448!4.36e-09!2;CL:0002308!4.36e-09!2;CL:0002140!4.36e-09!2;CL:0000362!2.85e-08!8;CL:0002202!8.28e-07!9;CL:0002632!8.28e-07!9 | |ontology_enrichment_celltype=CL:0002159!5.81e-24!13;CL:0002076!8.80e-24!43;CL:0000622!4.03e-19!5;CL:0000223!3.68e-16!59;CL:0000154!6.82e-16!6;CL:0002251!4.55e-13!21;CL:0002368!5.27e-13!13;CL:0002166!5.35e-13!3;CL:0002621!1.38e-12!3;CL:0002328!3.92e-12!3;CL:0000066!4.39e-12!254;CL:0002623!9.05e-12!3;CL:0000150!1.68e-10!9;CL:0002077!2.67e-10!33;CL:0000575!2.29e-09!2;CL:0000317!4.36e-09!2;CL:1000448!4.36e-09!2;CL:0002308!4.36e-09!2;CL:0002140!4.36e-09!2;CL:0000362!2.85e-08!8;CL:0002202!8.28e-07!9;CL:0002632!8.28e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002159;3.03e-43;14!CL:0002166;9.60e-24;3!CL:0002621;6.33e-23;3!CL:0000575;1.04e-16;2!CL:0000317;2.46e-16;2!CL:1000448;2.46e-16;2!CL:0002308;2.46e-16;2!CL:0002140;2.46e-16;2!CL:0002077;3.73e-15;34!CL:0000622;2.83e-14;5!CL:0000362;6.24e-14;9!CL:0000154;5.47e-12;6!CL:0002577;1.57e-11;3!CL:0002251;3.47e-09;20!CL:0002252;8.49e-09;1!CL:0000244;1.28e-08;4!CL:0000731;1.28e-08;4!CL:0000150;3.68e-08;9!CL:0000312;4.04e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,2.96e-43,14;CL:0002166,6.77e-24,3;CL:0002621,4.33e-23,3;CL:0002077,4.70e-17,34;CL:0000575,8.55e-17,2;CL:0000317,2.99e-16,2;CL:1000448,2.99e-16,2;CL:0002308,2.99e-16,2;CL:0002140,2.99e-16,2;CL:0000622,3.33e-14,5;CL:0000362,7.77e-14,9;CL:0000154,6.25e-12,6;CL:0002577,1.84e-11,3;CL:0002251,3.35e-09,20;CL:0002252,9.91e-09,1;CL:0000244,1.25e-08,4;CL:0000731,1.25e-08,4;CL:0000150,4.02e-08,9;CL:0000221,4.14e-07,72;CL:0000312,4.56e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.88e-09;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3151;4.54e-09;1!DOID:3149;4.54e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,4.19e-09,1;DOID:3149,4.19e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0000166!1.06e-16!21;UBERON:0001004!4.80e-16!72;UBERON:0000165!1.45e-14!28;UBERON:0000930!1.45e-14!28;UBERON:0000161!2.26e-13!35;UBERON:0001949!1.38e-12!3;UBERON:0004815!3.92e-12!3;UBERON:0002031!3.92e-12!3;UBERON:0004119!6.92e-12!169;UBERON:0000925!6.92e-12!169;UBERON:0006595!6.92e-12!169;UBERON:0003102!1.24e-11!95;UBERON:0001444!6.25e-11!48;UBERON:0001708!7.49e-10!4;UBERON:0001704!7.49e-10!4;UBERON:0001042!1.30e-09!10;UBERON:0009145!1.30e-09!10;UBERON:0002185!3.28e-09!4;UBERON:0000065!3.51e-09!53;UBERON:0002419!4.36e-09!2;UBERON:0007771!4.36e-09!2;UBERON:0003297!4.36e-09!2;UBERON:0001821!4.36e-09!2;UBERON:0003487!4.36e-09!2;UBERON:0001820!4.36e-09!2;UBERON:0005089!4.36e-09!2;UBERON:0005088!4.36e-09!2;UBERON:0003408!6.86e-09!10;UBERON:0006562!1.04e-08!11;UBERON:0004807!2.04e-07!28;UBERON:0000078!2.52e-07!18 | |ontology_enrichment_uberon=UBERON:0000166!1.06e-16!21;UBERON:0001004!4.80e-16!72;UBERON:0000165!1.45e-14!28;UBERON:0000930!1.45e-14!28;UBERON:0000161!2.26e-13!35;UBERON:0001949!1.38e-12!3;UBERON:0004815!3.92e-12!3;UBERON:0002031!3.92e-12!3;UBERON:0004119!6.92e-12!169;UBERON:0000925!6.92e-12!169;UBERON:0006595!6.92e-12!169;UBERON:0003102!1.24e-11!95;UBERON:0001444!6.25e-11!48;UBERON:0001708!7.49e-10!4;UBERON:0001704!7.49e-10!4;UBERON:0001042!1.30e-09!10;UBERON:0009145!1.30e-09!10;UBERON:0002185!3.28e-09!4;UBERON:0000065!3.51e-09!53;UBERON:0002419!4.36e-09!2;UBERON:0007771!4.36e-09!2;UBERON:0003297!4.36e-09!2;UBERON:0001821!4.36e-09!2;UBERON:0003487!4.36e-09!2;UBERON:0001820!4.36e-09!2;UBERON:0005089!4.36e-09!2;UBERON:0005088!4.36e-09!2;UBERON:0003408!6.86e-09!10;UBERON:0006562!1.04e-08!11;UBERON:0004807!2.04e-07!28;UBERON:0000078!2.52e-07!18 | ||
|ontology_enrichment_uberon_v019=UBERON:0001949;6.33e-23;3!UBERON:0001708;5.72e-18;4!UBERON:0008895;5.72e-18;4!UBERON:0002419;2.46e-16;2!UBERON:0007771;2.46e-16;2!UBERON:0003297;2.46e-16;2!UBERON:0001821;2.46e-16;2!UBERON:0003487;2.46e-16;2!UBERON:0001820;2.46e-16;2!UBERON:0000486;1.40e-15;12!UBERON:0011159;1.71e-14;5!UBERON:0000165;1.20e-12;28!UBERON:0001723;1.12e-11;3!UBERON:0001033;1.12e-11;3!UBERON:0001043;2.51e-11;3!UBERON:0010371;4.95e-11;31!UBERON:0003929;3.66e-10;7!UBERON:0000161;8.65e-10;19!UBERON:0000166;8.65e-10;19!UBERON:0002372;2.93e-09;1!UBERON:0001961;2.93e-09;1!UBERON:0001744;2.93e-09;1!UBERON:0001042;2.93e-09;1!UBERON:0001735;2.93e-09;1!UBERON:0003350;5.89e-09;8!UBERON:0001828;5.89e-09;8!UBERON:0001987;7.28e-09;4!UBERON:0000964;8.35e-09;4!UBERON:0010409;8.35e-09;4!UBERON:0001003;2.01e-08;15!UBERON:0007376;2.01e-08;15!UBERON:0007811;4.85e-08;52!UBERON:0001555;2.04e-07;54!UBERON:0000033;2.68e-07;50!UBERON:0000365;4.63e-07;5!UBERON:0000153;6.08e-07;54!UBERON:0011137;7.43e-07;11!UBERON:0010323;7.43e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,4.33e-23,3;UBERON:0003102,2.46e-19,99;UBERON:0000153,1.15e-18,62;UBERON:0007811,1.15e-18,62;UBERON:0001708,4.41e-18,4;UBERON:0008895,4.41e-18,4;UBERON:0000033,9.99e-18,56;UBERON:0000166,2.42e-16,22;UBERON:0002419,2.99e-16,2;UBERON:0007771,2.99e-16,2;UBERON:0003297,2.99e-16,2;UBERON:0001821,2.99e-16,2;UBERON:0003487,2.99e-16,2;UBERON:0001820,2.99e-16,2;UBERON:0005089,2.99e-16,2;UBERON:0005088,2.99e-16,2;UBERON:0011159,1.39e-14,5;UBERON:0010188,3.03e-12,6;UBERON:0002539,3.03e-12,6;UBERON:0008816,3.03e-12,6;UBERON:0000165,3.25e-12,29;UBERON:0000930,3.25e-12,29;UBERON:0001723,1.21e-11,3;UBERON:0001033,1.21e-11,3;UBERON:0010056,1.21e-11,3;UBERON:0001444,2.07e-11,49;UBERON:0001043,2.78e-11,3;UBERON:0009143,2.78e-11,3;UBERON:0008814,8.97e-11,18;UBERON:0000161,1.10e-09,36;UBERON:0002372,2.60e-09,1;UBERON:0001961,2.60e-09,1;UBERON:0001744,2.60e-09,1;UBERON:0001735,2.60e-09,1;UBERON:0003350,5.12e-09,8;UBERON:0001828,5.12e-09,8;UBERON:0000964,7.57e-09,4;UBERON:0010409,7.57e-09,4;UBERON:0004348,7.57e-09,4;UBERON:0005427,7.57e-09,4;UBERON:0001987,8.19e-09,4;UBERON:0004340,8.19e-09,4;UBERON:0001003,2.29e-08,15;UBERON:0007376,2.29e-08,15;UBERON:0007383,2.29e-08,15;UBERON:0001042,9.97e-08,10;UBERON:0009145,9.97e-08,10;UBERON:0000365,4.56e-07,5;UBERON:0006562,4.60e-07,11;UBERON:0010323,6.78e-07,11 | |||
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| ||
|short_description=p2@KRT6C | |short_description=p2@KRT6C | ||
}} | }} |
Latest revision as of 22:38, 18 September 2015
Short description: | p2@KRT6C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KRT6C_5end |
Coexpression cluster: | C594_Keratinocyte_Placental_amniotic_Esophageal_tongue_Corneal_Prostate |
Association with transcript: | -47bp_to_ENST00000252250, NM_173086, uc001sal.3_5end |
EntrezGene: | KRT6C |
HGNC: | 20406 |
UniProt: | P48668 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 2.96e-43 | 14 |
epithelial cell of Malassez | 6.77e-24 | 3 |
gingival epithelial cell | 4.33e-23 | 3 |
ecto-epithelial cell | 4.70e-17 | 34 |
corneal epithelial cell | 8.55e-17 | 2 |
sebum secreting cell | 2.99e-16 | 2 |
epithelial cell of sweat gland | 2.99e-16 | 2 |
epithelial cell of skin gland | 2.99e-16 | 2 |
acinar cell of sebaceous gland | 2.99e-16 | 2 |
acinar cell | 3.33e-14 | 5 |
epidermal cell | 7.77e-14 | 9 |
protein secreting cell | 6.25e-12 | 6 |
placental epithelial cell | 1.84e-11 | 3 |
epithelial cell of alimentary canal | 3.35e-09 | 20 |
epithelial cell of esophagus | 9.91e-09 | 1 |
transitional epithelial cell | 1.25e-08 | 4 |
urothelial cell | 1.25e-08 | 4 |
glandular epithelial cell | 4.02e-08 | 9 |
ectodermal cell | 4.14e-07 | 72 |
keratinocyte | 4.56e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 4.19e-09 | 1 |
keratoacanthoma | 4.19e-09 | 1 |