FFCP PHASE1:Hg19::chr12:4918462..4918475,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3742 | |EntrezGene=3742 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6225 | |HGNC=6225 | ||
|TSSclassifier=strong | |||
|UniProt=P17658 | |UniProt=P17658 | ||
|association_with_transcript=120bp_to_ENST00000280684,ENST00000433855,NM_002235,uc001qng.2_5end | |association_with_transcript=120bp_to_ENST00000280684,ENST00000433855,NM_002235,uc001qng.2_5end | ||
|cluster_id=chr12:4918462..4918475,+ | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_2_at_KCNA6_5end | |description=CAGE_peak_2_at_KCNA6_5end | ||
|id=chr12:4918462..4918475,+ | |id=chr12:4918462..4918475,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.86e-12;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.21e-56!57;UBERON:0005068!3.21e-56!57;UBERON:0006241!3.21e-56!57;UBERON:0007135!3.21e-56!57;UBERON:0003075!1.33e-53!86;UBERON:0007284!1.33e-53!86;UBERON:0005743!3.84e-52!86;UBERON:0001017!1.46e-51!82;UBERON:0002346!2.79e-50!90;UBERON:0002616!2.98e-46!59;UBERON:0000073!2.74e-45!94;UBERON:0001016!2.74e-45!94;UBERON:0000955!1.64e-44!69;UBERON:0006238!1.64e-44!69;UBERON:0003080!9.85e-42!42;UBERON:0002780!1.68e-40!41;UBERON:0001890!1.68e-40!41;UBERON:0006240!1.68e-40!41;UBERON:0003056!4.33e-40!61;UBERON:0001893!1.22e-39!34;UBERON:0002020!2.22e-39!34;UBERON:0003528!2.22e-39!34;UBERON:0002791!4.05e-38!33;UBERON:0001869!8.08e-37!32;UBERON:0000956!2.24e-33!25;UBERON:0000203!2.24e-33!25;UBERON:0007023!2.44e-32!115;UBERON:0000153!8.06e-31!129;UBERON:0007811!8.06e-31!129;UBERON:0002619!1.06e-30!22;UBERON:0000033!1.02e-29!123;UBERON:0001950!6.69e-28!20;UBERON:0004121!1.28e-26!169;UBERON:0000924!1.69e-25!173;UBERON:0006601!1.69e-25!173;UBERON:0000025!1.75e-17!194;UBERON:0000119!1.21e-15!312;UBERON:0000064!1.25e-15!219;UBERON:0003076!4.71e-15!15;UBERON:0003057!4.71e-15!15;UBERON:0000483!5.97e-15!309;UBERON:0004111!5.74e-12!241;UBERON:0002298!6.44e-12!8;UBERON:0000477!2.23e-11!286;UBERON:0000481!2.41e-11!347;UBERON:0004733!3.43e-11!12;UBERON:0002028!3.43e-11!12;UBERON:0007277!3.43e-11!12;UBERON:0000475!3.02e-10!365;UBERON:0004732!3.99e-10!13;UBERON:0000200!4.59e-10!6;UBERON:0001871!1.92e-09!7;UBERON:0002021!6.80e-09!5;UBERON:0001872!1.40e-08!5;UBERON:0000349!2.72e-08!5;UBERON:0000922!6.52e-08!612;UBERON:0002308!8.09e-08!9;UBERON:0000125!8.09e-08!9;UBERON:0002420!9.92e-08!9;UBERON:0007245!9.92e-08!9;UBERON:0010009!9.92e-08!9;UBERON:0010011!9.92e-08!9;UBERON:0000454!9.92e-08!9;UBERON:0002680!1.16e-07!9;UBERON:0001895!1.16e-07!9;UBERON:0010092!1.16e-07!9;UBERON:0000062!8.65e-07!511 | |ontology_enrichment_uberon=UBERON:0001049!3.21e-56!57;UBERON:0005068!3.21e-56!57;UBERON:0006241!3.21e-56!57;UBERON:0007135!3.21e-56!57;UBERON:0003075!1.33e-53!86;UBERON:0007284!1.33e-53!86;UBERON:0005743!3.84e-52!86;UBERON:0001017!1.46e-51!82;UBERON:0002346!2.79e-50!90;UBERON:0002616!2.98e-46!59;UBERON:0000073!2.74e-45!94;UBERON:0001016!2.74e-45!94;UBERON:0000955!1.64e-44!69;UBERON:0006238!1.64e-44!69;UBERON:0003080!9.85e-42!42;UBERON:0002780!1.68e-40!41;UBERON:0001890!1.68e-40!41;UBERON:0006240!1.68e-40!41;UBERON:0003056!4.33e-40!61;UBERON:0001893!1.22e-39!34;UBERON:0002020!2.22e-39!34;UBERON:0003528!2.22e-39!34;UBERON:0002791!4.05e-38!33;UBERON:0001869!8.08e-37!32;UBERON:0000956!2.24e-33!25;UBERON:0000203!2.24e-33!25;UBERON:0007023!2.44e-32!115;UBERON:0000153!8.06e-31!129;UBERON:0007811!8.06e-31!129;UBERON:0002619!1.06e-30!22;UBERON:0000033!1.02e-29!123;UBERON:0001950!6.69e-28!20;UBERON:0004121!1.28e-26!169;UBERON:0000924!1.69e-25!173;UBERON:0006601!1.69e-25!173;UBERON:0000025!1.75e-17!194;UBERON:0000119!1.21e-15!312;UBERON:0000064!1.25e-15!219;UBERON:0003076!4.71e-15!15;UBERON:0003057!4.71e-15!15;UBERON:0000483!5.97e-15!309;UBERON:0004111!5.74e-12!241;UBERON:0002298!6.44e-12!8;UBERON:0000477!2.23e-11!286;UBERON:0000481!2.41e-11!347;UBERON:0004733!3.43e-11!12;UBERON:0002028!3.43e-11!12;UBERON:0007277!3.43e-11!12;UBERON:0000475!3.02e-10!365;UBERON:0004732!3.99e-10!13;UBERON:0000200!4.59e-10!6;UBERON:0001871!1.92e-09!7;UBERON:0002021!6.80e-09!5;UBERON:0001872!1.40e-08!5;UBERON:0000349!2.72e-08!5;UBERON:0000922!6.52e-08!612;UBERON:0002308!8.09e-08!9;UBERON:0000125!8.09e-08!9;UBERON:0002420!9.92e-08!9;UBERON:0007245!9.92e-08!9;UBERON:0010009!9.92e-08!9;UBERON:0010011!9.92e-08!9;UBERON:0000454!9.92e-08!9;UBERON:0002680!1.16e-07!9;UBERON:0001895!1.16e-07!9;UBERON:0010092!1.16e-07!9;UBERON:0000062!8.65e-07!511 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;4.08e-63;22!UBERON:0000956;2.11e-55;25!UBERON:0000203;2.11e-55;25!UBERON:0001950;5.35e-54;20!UBERON:0003528;2.76e-52;34!UBERON:0002020;2.76e-52;34!UBERON:0001893;1.57e-50;34!UBERON:0001869;1.25e-46;32!UBERON:0002791;2.13e-46;32!UBERON:0002780;5.53e-42;41!UBERON:0001890;5.53e-42;41!UBERON:0000073;2.34e-35;53!UBERON:0002616;2.34e-35;53!UBERON:0000200;3.18e-22;6!UBERON:0001017;8.77e-22;75!UBERON:0000955;1.45e-21;68!UBERON:0001016;3.31e-19;83!UBERON:0002021;7.00e-18;5!UBERON:0001872;3.25e-17;5!UBERON:0001870;1.19e-16;3!UBERON:0000988;3.10e-16;3!UBERON:0002298;4.21e-14;6!UBERON:0001954;2.10e-11;2!UBERON:0002148;2.10e-11;2!UBERON:0002702;2.10e-11;2!UBERON:0006331;2.10e-11;2!UBERON:0009662;2.10e-11;2!UBERON:0003022;2.10e-11;2!UBERON:0002421;2.10e-11;2!UBERON:0002600;2.10e-11;2!UBERON:0000349;5.99e-10;5!UBERON:0000125;1.91e-09;9!UBERON:0002308;1.91e-09;9!UBERON:0007023;2.36e-08;114!UBERON:0011216;9.88e-08;132!UBERON:0001871;2.09e-07;6!UBERON:0004733;4.17e-07;12!UBERON:0002028;4.17e-07;12!UBERON:0002581;5.89e-07;1!UBERON:0002902;5.89e-07;1!UBERON:0003112;5.89e-07;1!UBERON:0011158;5.89e-07;1!UBERON:0009899;5.89e-07;1!UBERON:0007190;5.89e-07;1!UBERON:0003128;5.89e-07;1!UBERON:0001703;5.89e-07;1!UBERON:0002241;5.89e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.66e-63,22;UBERON:0001893,2.28e-62,34;UBERON:0001049,5.29e-62,56;UBERON:0005068,5.29e-62,56;UBERON:0006241,5.29e-62,56;UBERON:0007135,5.29e-62,56;UBERON:0003528,9.28e-62,34;UBERON:0002020,9.28e-62,34;UBERON:0000073,1.62e-60,53;UBERON:0002616,1.62e-60,53;UBERON:0002780,1.65e-56,41;UBERON:0001890,1.65e-56,41;UBERON:0003080,1.65e-56,41;UBERON:0006240,1.65e-56,41;UBERON:0000956,9.56e-56,25;UBERON:0000203,9.56e-56,25;UBERON:0001950,1.78e-54,20;UBERON:0001869,3.24e-54,32;UBERON:0002791,7.63e-54,32;UBERON:0000955,1.88e-53,68;UBERON:0006238,1.88e-53,68;UBERON:0001017,1.85e-51,81;UBERON:0001016,7.89e-46,89;UBERON:0003075,4.27e-44,82;UBERON:0007284,4.27e-44,82;UBERON:0002346,8.46e-42,86;UBERON:0003056,2.70e-40,61;UBERON:0010371,2.53e-36,104;UBERON:0010314,1.61e-27,132;UBERON:0004121,7.66e-25,171;UBERON:0000924,7.66e-25,171;UBERON:0006601,7.66e-25,171;UBERON:0007023,1.07e-23,114;UBERON:0000200,1.76e-22,6;UBERON:0011216,1.24e-20,223;UBERON:0002021,4.78e-18,5;UBERON:0001872,3.01e-17,5;UBERON:0000025,4.87e-17,192;UBERON:0001870,8.48e-17,3;UBERON:0000988,9.62e-16,3;UBERON:0002298,1.11e-13,6;UBERON:0004111,1.95e-12,240;UBERON:0002702,1.18e-11,2;UBERON:0001954,2.90e-11,2;UBERON:0003022,2.90e-11,2;UBERON:0002421,2.90e-11,2;UBERON:0002600,2.90e-11,2;UBERON:0002148,6.69e-11,2;UBERON:0006331,6.69e-11,2;UBERON:0009662,6.69e-11,2;UBERON:0000483,3.07e-10,306;UBERON:0000119,4.44e-10,309;UBERON:0000349,9.42e-10,5;UBERON:0000125,4.98e-09,9;UBERON:0002308,4.98e-09,9;UBERON:0003076,1.88e-08,15;UBERON:0003057,1.88e-08,15;UBERON:0001871,1.94e-07,6;UBERON:0003112,5.43e-07,1;UBERON:0011158,5.43e-07,1;UBERON:0003128,5.43e-07,1;UBERON:0001703,5.43e-07,1;UBERON:0002241,5.43e-07,1;UBERON:0004761,5.43e-07,1;UBERON:0009617,5.43e-07,1;UBERON:0002581,6.08e-07,1;UBERON:0002902,6.43e-07,1;UBERON:0009899,6.43e-07,1;UBERON:0004733,6.61e-07,12;UBERON:0002028,6.61e-07,12;UBERON:0007277,6.61e-07,12;UBERON:0007190,6.80e-07,1 | |||
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| ||
|short_description=p2@KCNA6 | |short_description=p2@KCNA6 | ||
}} | }} |
Latest revision as of 14:21, 18 September 2015
Short description: | p2@KCNA6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KCNA6_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 120bp_to_ENST00000280684, ENST00000433855, NM_002235, uc001qng.2_5end |
EntrezGene: | KCNA6 |
HGNC: | 6225 |
UniProt: | P17658 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data