FFCP PHASE1:Hg19::chr12:127737083..127737103,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:127737083..127737103,- | |||
|coexpression_cluster_id=C510 | |coexpression_cluster_id=C510 | ||
|description=CAGE_peak_at_chr12:127737083..127737103,- | |description=CAGE_peak_at_chr12:127737083..127737103,- | ||
|id=chr12:127737083..127737103,- | |id=chr12:127737083..127737103,- | ||
|ontology_enrichment_celltype=CL:0000054!1.14e-20!2;CL:0000137!1.14e-20!2;CL:0000092!1.14e-20!2;CL:0002573!3.20e-13!2;CL:0000680!1.94e-07!57;CL:0000056!1.94e-07!57;CL:0000355!1.94e-07!57 | |ontology_enrichment_celltype=CL:0000054!1.14e-20!2;CL:0000137!1.14e-20!2;CL:0000092!1.14e-20!2;CL:0002573!3.20e-13!2;CL:0000680!1.94e-07!57;CL:0000056!1.94e-07!57;CL:0000355!1.94e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0000054;3.11e-21;2!CL:0000137;3.11e-21;2!CL:0000092;3.11e-21;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,3.11e-21,2;CL:0000137,3.11e-21,2;CL:0000092,3.11e-21,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:200!1.14e-20!2;DOID:4305!1.14e-20!2;DOID:0060085!2.53e-11!1;DOID:3165!2.53e-11!1;DOID:0060121!2.53e-11!1;DOID:2438!2.53e-11!1;DOID:4418!2.53e-11!1;DOID:2513!5.57e-11!1;DOID:201!1.73e-07!6;DOID:0060100!1.73e-07!6 | |ontology_enrichment_disease=DOID:200!1.14e-20!2;DOID:4305!1.14e-20!2;DOID:0060085!2.53e-11!1;DOID:3165!2.53e-11!1;DOID:0060121!2.53e-11!1;DOID:2438!2.53e-11!1;DOID:4418!2.53e-11!1;DOID:2513!5.57e-11!1;DOID:201!1.73e-07!6;DOID:0060100!1.73e-07!6 | ||
|ontology_enrichment_disease_v019=DOID:0060085;6.62e-41;1!DOID:3165;6.62e-41;1!DOID:0060121;6.62e-41;1!DOID:2438;6.62e-41;1!DOID:4418;6.62e-41;1!DOID:200;3.11e-21;2!DOID:4305;3.11e-21;2!DOID:2394;2.51e-12;14!DOID:0060072;2.53e-11;4!DOID:201;5.54e-08;6!DOID:0060100;5.54e-08;6!DOID:120;7.24e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,6.62e-41,1;DOID:3165,6.62e-41,1;DOID:0060121,6.62e-41,1;DOID:2438,6.62e-41,1;DOID:4418,6.62e-41,1;DOID:200,3.11e-21,2;DOID:4305,3.11e-21,2;DOID:2394,2.51e-12,14;DOID:0060072,2.53e-11,4;DOID:201,5.54e-08,6;DOID:0060100,5.54e-08,6;DOID:120,7.24e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0001282!2.79e-11!1;UBERON:0009842!2.79e-11!1;UBERON:0003704!2.79e-11!1;UBERON:0001171!2.79e-11!1;UBERON:0001172!2.79e-11!1;UBERON:0000014!9.52e-11!4;UBERON:0002118!8.03e-09!5;UBERON:0004532!8.03e-09!5;UBERON:0001134!6.68e-07!61;UBERON:0002036!6.68e-07!61;UBERON:0003082!6.68e-07!61 | |ontology_enrichment_uberon=UBERON:0001282!2.79e-11!1;UBERON:0009842!2.79e-11!1;UBERON:0003704!2.79e-11!1;UBERON:0001171!2.79e-11!1;UBERON:0001172!2.79e-11!1;UBERON:0000014!9.52e-11!4;UBERON:0002118!8.03e-09!5;UBERON:0004532!8.03e-09!5;UBERON:0001134!6.68e-07!61;UBERON:0002036!6.68e-07!61;UBERON:0003082!6.68e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0001282;9.91e-41;1!UBERON:0009842;9.91e-41;1!UBERON:0003704;9.91e-41;1!UBERON:0001171;9.91e-41;1!UBERON:0001172;9.91e-41;1!UBERON:0002118;1.99e-32;5!UBERON:0001280;1.40e-14;3!UBERON:0004647;1.40e-14;3!UBERON:0000992;3.43e-13;13!UBERON:0000014;2.53e-11;4!UBERON:0002394;2.80e-11;4!UBERON:0003928;2.80e-11;4!UBERON:0000991;1.48e-08;21!UBERON:0002294;5.38e-07;7!UBERON:0001173;5.38e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,9.91e-41,1;UBERON:0009842,9.91e-41,1;UBERON:0003704,9.91e-41,1;UBERON:0001171,9.91e-41,1;UBERON:0001172,9.91e-41,1;UBERON:0002118,1.99e-32,5;UBERON:0001280,1.40e-14,3;UBERON:0004647,1.40e-14,3;UBERON:0005171,1.40e-14,3;UBERON:0000992,3.43e-13,13;UBERON:0000014,2.53e-11,4;UBERON:0000991,1.48e-08,21;UBERON:0009196,1.48e-08,21;UBERON:0009117,1.48e-08,21;UBERON:0005564,1.48e-08,21;UBERON:0004176,3.27e-08,22;UBERON:0002394,5.92e-08,6;UBERON:0003928,5.92e-08,6 | |||
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|short_description=p@chr12:127737083..127737103,- | |short_description=p@chr12:127737083..127737103,- | ||
}} | }} |
Latest revision as of 06:37, 24 July 2015
Short description: | p@chr12:127737083..127737103, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:127737083..127737103, - |
Coexpression cluster: | C510_fibrous_mesothelioma_cholangiocellular_liposarcoma_Fibroblast_mesenchymal_leukemia |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 3.11e-21 | 2 |
osteocyte | 3.11e-21 | 2 |
osteoclast | 3.11e-21 | 2 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 9.91e-41 | 1 |
acinus | 9.91e-41 | 1 |
intrahepatic bile duct | 9.91e-41 | 1 |
portal lobule | 9.91e-41 | 1 |
hepatic acinus | 9.91e-41 | 1 |
right ovary | 1.99e-32 | 5 |
liver parenchyma | 1.40e-14 | 3 |
liver lobule | 1.40e-14 | 3 |
hepatic duct | 1.40e-14 | 3 |
female gonad | 3.43e-13 | 13 |
zone of skin | 2.53e-11 | 4 |
gonad | 1.48e-08 | 21 |
indifferent external genitalia | 1.48e-08 | 21 |
indifferent gonad | 1.48e-08 | 21 |
gonad primordium | 1.48e-08 | 21 |
external genitalia | 3.27e-08 | 22 |
bile duct | 5.92e-08 | 6 |
digestive system duct | 5.92e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 6.62e-41 | 1 |
skin benign neoplasm | 6.62e-41 | 1 |
integumentary system benign neoplasm | 6.62e-41 | 1 |
dermis tumor | 6.62e-41 | 1 |
cutaneous fibrous histiocytoma | 6.62e-41 | 1 |
giant cell tumor | 3.11e-21 | 2 |
bone giant cell tumor | 3.11e-21 | 2 |
ovarian cancer | 2.51e-12 | 14 |
benign neoplasm | 2.53e-11 | 4 |
connective tissue cancer | 5.54e-08 | 6 |
musculoskeletal system cancer | 5.54e-08 | 6 |
female reproductive organ cancer | 7.24e-07 | 27 |