FFCP PHASE1:Hg19::chr12:122242597..122242615,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23067 | |EntrezGene=23067 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29187 | |HGNC=29187 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-14bp_to_uc001ubi.2_5end | |association_with_transcript=-14bp_to_uc001ubi.2_5end | ||
|cluster_id=chr12:122242597..122242615,+ | |||
|coexpression_cluster_id=C23 | |coexpression_cluster_id=C23 | ||
|description=CAGE_peak_5_at_SETD1B_5end | |description=CAGE_peak_5_at_SETD1B_5end | ||
|id=chr12:122242597..122242615,+ | |id=chr12:122242597..122242615,+ | ||
|ontology_enrichment_celltype=CL:0000791!4.74e-10!18;CL:0000789!4.74e-10!18;CL:0002420!4.74e-10!18;CL:0002419!4.74e-10!18;CL:0000790!4.74e-10!18;CL:0000084!1.39e-07!25;CL:0000827!1.39e-07!25;CL:0000624!2.70e-07!6;CL:0000542!4.34e-07!53;CL:0000051!4.34e-07!53;CL:0000838!8.09e-07!52 | |ontology_enrichment_celltype=CL:0000791!4.74e-10!18;CL:0000789!4.74e-10!18;CL:0002420!4.74e-10!18;CL:0002419!4.74e-10!18;CL:0000790!4.74e-10!18;CL:0000084!1.39e-07!25;CL:0000827!1.39e-07!25;CL:0000624!2.70e-07!6;CL:0000542!4.34e-07!53;CL:0000051!4.34e-07!53;CL:0000838!8.09e-07!52 | ||
|ontology_enrichment_celltype_v019=CL:0000791;7.20e-41;18!CL:0000789;7.20e-41;18!CL:0002419;7.20e-41;18!CL:0000084;1.31e-28;25!CL:0000624;1.64e-27;6!CL:0000625;6.72e-20;11!CL:0000226;6.52e-15;3!CL:0000842;6.52e-15;3!CL:0000542;7.86e-15;53!CL:0000898;3.97e-14;3!CL:0000623;5.32e-14;3!CL:0000815;3.84e-10;2!CL:0000792;3.84e-10;2!CL:0002677;3.84e-10;2!CL:0002087;1.45e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.81e-41,18;CL:0000789,5.81e-41,18;CL:0002420,5.81e-41,18;CL:0002419,5.81e-41,18;CL:0000790,5.81e-41,18;CL:0000084,1.13e-28,25;CL:0000827,1.13e-28,25;CL:0000624,1.10e-27,6;CL:0000838,1.38e-27,52;CL:0000542,5.56e-27,53;CL:0000051,5.56e-27,53;CL:0000625,7.16e-20,11;CL:0002087,3.93e-17,115;CL:0000226,6.55e-15,3;CL:0000842,6.55e-15,3;CL:0000623,2.07e-14,3;CL:0000825,2.07e-14,3;CL:0000898,2.72e-14,3;CL:0000738,1.20e-13,136;CL:0002031,5.15e-13,120;CL:0000037,3.49e-12,168;CL:0000988,2.87e-11,177;CL:0000815,2.93e-10,2;CL:0000792,2.93e-10,2;CL:0002677,2.93e-10,2;CL:0002032,1.90e-09,161;CL:0000837,1.90e-09,161 | |||
|ontology_enrichment_development_v019=CL:0000790;7.20e-41;18!CL:0000051;7.86e-15;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.09e-09;2!UBERON:0005058;1.09e-09;2!UBERON:0009113;1.09e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.90e-10,4;UBERON:0005058,2.90e-10,4;UBERON:0009113,2.90e-10,4;UBERON:0003295,2.90e-10,4;UBERON:0005562,2.90e-10,4;UBERON:0003351,5.42e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0.246242116153576,0.204000691244253,0,0.286235987131057,0,0,0.0764134057479513,0,0,0,0.767658796194425,0.928896739896456,0,0,0,0,0,0.293600439334847,0,0.802177789880567,1.08505435357926,0,0.32389366601898,0,0.145398238779565,0,0,0.232429036905685,0.411167888021826,0,0.28769239232215,0.256160706529101,0,0.344745680736619,0.645484683583826,0,0.188242339542605,0.545812300115692,0,0,0.320929027076094,0,0.329851300186716,0.199463657621632,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0.150176892841506,0,0.285012743741249,0,0,0,0,0,0.426730222566507,0.400395987036012,0,0,0,1.70763890732835,2.93618594685469,1.91136614062614,0,0,0.263384084775077,5.31116379307349,3.93010762749165,3.49522548299166,1.5046784585161,3.58514493296949,4.73447805734733,1.94826728407911,0.222820913770347,1.76763544484902,1.99380505125259,1.89562704635511,1.28091319725675,1.1705341280389,0.493313713811028,0,0,5.6348894001583,6.1534390460634,2.09071047609954,0.226618685395132,1.53288197440768,0.34362744548263,1.26509846009751,1.27426165729639,0,0,1.50575119077773,0.895906278080929,3.74792179657038,2.13099526839615,0,4.83856183739358,2.67440195783507,7.24122019413995,0,0,0,0.361439152384566,0,0,0,0,0,0,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0.910161361938026,0,0,0.250237039743928,0.277064115484183,0,0.30648779579902,0,0.113432183160021,0.179389635688862,0,0.211931901159562,0.300091096084402,0,0.257640540045629,0,0,0,0,0.0920498986422993,0.161646056818812,0.710019185033229,0.201504196455281,0,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0,1.56449532329816,0,0,0,0,0.118306800039844,0,0.241011029883482,0,0.217879444092406,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,2.37061319387782,0.858486162094873,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,1.97030760201927,1.94064817373566,2.56686072559497,0,0,0,0.167516265334349,0,0,0,0.828831026872071,0,0,0.271265023699736,0,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,2.68798433959754,3.01999881146064,3.62873696531711,0,0,0,0.248107807818777,0,0,0.256278298511402,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,1.09629938322967,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.330569830721956,0,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0.243713489631284,0,0.409499734223957,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,1.34060455107157,0,0.0941438007767792,0,0,0.443430153536676,0.229723400206959,0.507447609232169,0.764637207142375,1.13929437434833,0.714695326373367,0.411362273086194,0,0,0.79312517629427,0.106824071127473,0,0.245040215981032,0.185803175125719,0.28853842595289,0.640276590135727,0.159426272728822,0.199579371432817,0.191505370132367,0,0.324621940274555,0,0,0,0,0,0.321176150207399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0,0.211125408127993,0.19924798825107,0.552567831062295,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0.349839999984783,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0,0,0.552896299656123,0.295547618953547,0,0,0,0.307801034015188,0.113942055847001,0,0,0,0,0.274792780205587,0.533034776018635,0,0,0,0,0.19606253431774,0.167821586975843,0,0,0,0,0,0.216388639742091,0.995261931078505,0.0884575645033392,0,0.593042257361244,0,0,0,0,0,0,0.586993856796269,0,0,0,0.61214552326098,0.31593289814244,0,0.103688191397247,0,0,0,1.19472429772959,0,0,0,0.293977192243133,0,0.17472666824203,0.171986032471617,0.580537987734511,0.146178634172371,0.492692742319255,0.0969890164884194,0.264768380074501,0,0,0,0.126621591911757,0.782205530939212,0.0801588202515337,0.426905989478705,0.599428828746391,0.288180834308212,0.114536596165916,0,0,0.248505071130865,0.235694034616795,0.135904206073614,0,0,0,0,0,1.27746588066972,0.429765441419957,0,0,0.229160424011684,0,0,0,0,0.268733889946905,0,0,0,0,0.0674035438541849,0,0,0,0.544813624446302,0,0.137539436597234,0,0.2249738915515,0,0,0,0.0788057072991982,0,0.105600336519406,0,0.191915197319445,0,0,0.25426853765475,0.542999601753713,0,0,0,0.328370082997356,0,0.113312091520126,0.146552233678082,0,0,0,0,0,0.213574825135389,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.221858103073705,0,0.415045904808692,0.124980407962107,0,0.285465333544967,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0.260994291965212,0.226705925512272,0,0.244736704506468,0.358177682162975,0.308801447160972,0,0.176689145945881,0,0,0,0,0.303859956177382,0,0.38972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| ||
|short_description=p5@SETD1B | |short_description=p5@SETD1B | ||
}} | }} |
Latest revision as of 23:01, 16 September 2015
Short description: | p5@SETD1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SETD1B_5end |
Coexpression cluster: | C23_CD4_CD8_Natural_Peripheral_Basophils_CD19_CD14 |
Association with transcript: | -14bp_to_uc001ubi.2_5end |
EntrezGene: | SETD1B |
HGNC: | 29187 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.81e-41 | 18 |
alpha-beta T cell | 5.81e-41 | 18 |
immature T cell | 5.81e-41 | 18 |
mature T cell | 5.81e-41 | 18 |
immature alpha-beta T cell | 5.81e-41 | 18 |
T cell | 1.13e-28 | 25 |
pro-T cell | 1.13e-28 | 25 |
CD4-positive, alpha-beta T cell | 1.10e-27 | 6 |
lymphoid lineage restricted progenitor cell | 1.38e-27 | 52 |
lymphocyte | 5.56e-27 | 53 |
common lymphoid progenitor | 5.56e-27 | 53 |
CD8-positive, alpha-beta T cell | 7.16e-20 | 11 |
nongranular leukocyte | 3.93e-17 | 115 |
single nucleate cell | 6.55e-15 | 3 |
mononuclear cell | 6.55e-15 | 3 |
natural killer cell | 2.07e-14 | 3 |
pro-NK cell | 2.07e-14 | 3 |
naive T cell | 2.72e-14 | 3 |
leukocyte | 1.20e-13 | 136 |
hematopoietic lineage restricted progenitor cell | 5.15e-13 | 120 |
hematopoietic stem cell | 3.49e-12 | 168 |
hematopoietic cell | 2.87e-11 | 177 |
regulatory T cell | 2.93e-10 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.93e-10 | 2 |
naive regulatory T cell | 2.93e-10 | 2 |
hematopoietic oligopotent progenitor cell | 1.90e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.90e-09 | 161 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.90e-10 | 4 |
hemolymphoid system gland | 2.90e-10 | 4 |
thymic region | 2.90e-10 | 4 |
pharyngeal gland | 2.90e-10 | 4 |
thymus primordium | 2.90e-10 | 4 |
pharyngeal epithelium | 5.42e-07 | 6 |