FFCP PHASE1:Hg19::chr17:80291751..80291762,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:80291751..80291762,-
|short_description=p5@SECTM1
|description=CAGE_peak_5_at_SECTM1_5end
|association_with_transcript=158bp_to_ENST00000269389,NM_003004,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6398 | |EntrezGene=6398 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10707 | |HGNC=10707 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WVN6 | |UniProt=Q8WVN6 | ||
|association_with_transcript=158bp_to_ENST00000269389,NM_003004,uc002keo.2,uc002kep.2_5end | |||
|cluster_id=chr17:80291751..80291762,- | |||
|description=CAGE_peak_5_at_SECTM1_5end | |||
|id=chr17:80291751..80291762,- | |||
|ontology_enrichment_celltype=CL:0000057!6.41e-08!75 | |||
|ontology_enrichment_celltype_v019=CL:0000346;4.66e-19;3!CL:1000428;4.66e-19;3!CL:0002559;1.16e-11;5!CL:0000135;1.77e-09;3!CL:0000214;1.77e-09;3!CL:0000388;1.77e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,2.14e-19,3;CL:1000428,2.14e-19,3;CL:0002559,7.31e-12,5;CL:0000214,1.29e-09,3;CL:0000135,1.81e-09,3;CL:0000388,1.81e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.34e-16;29!UBERON:0003099;7.74e-08;1!UBERON:0003852;7.74e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4231;2.70e-13;2!DOID:1907;2.70e-13;2!DOID:3151;1.74e-07;1!DOID:3149;1.74e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4231,3.27e-13,2;DOID:1907,3.27e-13,2;DOID:3151,3.17e-07,1;DOID:3149,3.17e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!8.07e-16!9;UBERON:0001557!8.70e-09!19;UBERON:0003102!1.99e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.11e-56;9!UBERON:0001557;1.11e-56;9!UBERON:0000412;4.66e-19;3!UBERON:0001992;4.66e-19;3!UBERON:0000072;5.00e-12;37!UBERON:0002073;1.16e-11;5!UBERON:0000065;3.74e-10;44!UBERON:0007846;1.77e-09;3!UBERON:0006915;1.77e-09;3!UBERON:0007616;1.77e-09;3!UBERON:0000043;1.77e-09;3!UBERON:0007845;1.77e-09;3!UBERON:0002217;1.77e-09;3!UBERON:0002018;1.77e-09;3!UBERON:0005705;7.74e-08;1!UBERON:0008193;7.74e-08;1!UBERON:0010912;7.74e-08;1!UBERON:0002514;7.74e-08;1!UBERON:0003457;7.74e-08;1!UBERON:0008907;7.74e-08;1!UBERON:0008001;7.74e-08;1!UBERON:0007213;7.74e-08;1!UBERON:0009891;7.74e-08;1!UBERON:0007914;7.74e-08;1!UBERON:0007375;7.74e-08;1!UBERON:0003323;7.74e-08;1!UBERON:0010258;7.74e-08;1!UBERON:0005253;7.74e-08;1!UBERON:0007842;7.74e-08;1!UBERON:0002397;7.74e-08;1!UBERON:0003113;7.74e-08;1!UBERON:0003277;7.74e-08;1!UBERON:0001709;7.74e-08;1!UBERON:0002244;7.74e-08;1!UBERON:0005620;7.74e-08;1!UBERON:0010364;7.74e-08;1!UBERON:0004288;7.74e-08;1!UBERON:0004905;1.22e-07;8!UBERON:0000982;1.22e-07;8!UBERON:0004770;1.22e-07;8!UBERON:0007195;1.74e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,4.14e-57,9;UBERON:0001557,2.64e-26,19;UBERON:0000412,2.14e-19,3;UBERON:0001992,2.14e-19,3;UBERON:0008947,2.07e-12,38;UBERON:0003258,2.07e-12,38;UBERON:0002073,7.31e-12,5;UBERON:0005086,7.31e-12,5;UBERON:0000072,9.52e-10,47;UBERON:0006915,1.29e-09,3;UBERON:0007616,1.29e-09,3;UBERON:0002217,1.29e-09,3;UBERON:0002018,1.29e-09,3;UBERON:0007846,1.81e-09,3;UBERON:0000043,1.81e-09,3;UBERON:0007845,1.81e-09,3;UBERON:0000065,2.71e-08,54;UBERON:0005705,8.84e-08,1;UBERON:0008193,8.84e-08,1;UBERON:0010912,8.84e-08,1;UBERON:0002514,8.84e-08,1;UBERON:0003457,8.84e-08,1;UBERON:0008907,8.84e-08,1;UBERON:0008001,8.84e-08,1;UBERON:0007213,8.84e-08,1;UBERON:0009891,8.84e-08,1;UBERON:0007914,8.84e-08,1;UBERON:0009292,8.84e-08,1;UBERON:0003099,8.84e-08,1;UBERON:0007375,8.84e-08,1;UBERON:0003323,8.84e-08,1;UBERON:0010258,8.84e-08,1;UBERON:0007842,8.84e-08,1;UBERON:0009494,8.84e-08,1;UBERON:0010042,8.84e-08,1;UBERON:0010045,8.84e-08,1;UBERON:0010259,8.84e-08,1;UBERON:0010359,8.84e-08,1;UBERON:0009526,8.84e-08,1;UBERON:0002397,8.84e-08,1;UBERON:0003113,8.84e-08,1;UBERON:0003277,8.84e-08,1;UBERON:0001709,8.84e-08,1;UBERON:0004066,8.84e-08,1;UBERON:0002244,8.84e-08,1;UBERON:0005620,8.84e-08,1;UBERON:0004362,8.84e-08,1;UBERON:0010364,8.84e-08,1;UBERON:0010046,8.84e-08,1;UBERON:0005868,8.84e-08,1;UBERON:0007238,8.84e-08,1;UBERON:0004288,8.84e-08,1;UBERON:0004068,8.84e-08,1;UBERON:0010334,8.84e-08,1;UBERON:0003852,8.84e-08,1;UBERON:0010253,8.84e-08,1;UBERON:0004905,1.09e-07,8;UBERON:0000982,1.09e-07,8;UBERON:0004770,1.09e-07,8;UBERON:0007195,2.80e-07,1;UBERON:0001004,5.04e-07,74;UBERON:0002067,8.55e-07,9;UBERON:0004016,8.55e-07,9;UBERON:0010083,8.55e-07,9 | |||
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| ||
|short_description=p5@SECTM1 | |||
}} | }} |
Latest revision as of 12:27, 18 September 2015
Short description: | p5@SECTM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SECTM1_5end |
Coexpression cluster: | NA |
Association with transcript: | 158bp_to_ENST00000269389, NM_003004, uc002keo.2, uc002kep.2_5end |
EntrezGene: | SECTM1 |
HGNC: | 10707 |
UniProt: | Q8WVN6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 2.14e-19 | 3 |
stem cell of epidermis | 2.14e-19 | 3 |
hair follicle cell | 7.31e-12 | 5 |
synovial cell | 1.29e-09 | 3 |
fibrocyte | 1.81e-09 | 3 |
tendon cell | 1.81e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
histiocytoma | 3.27e-13 | 2 |
malignant fibroxanthoma | 3.27e-13 | 2 |
skin squamous cell carcinoma | 3.17e-07 | 1 |
keratoacanthoma | 3.17e-07 | 1 |