FFCP PHASE1:Hg19::chr11:826136..826180,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283229 | |EntrezGene=283229 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28703 | |HGNC=28703 | ||
|TSSclassifier=strong | |||
|UniProt=E9PRE5,E9PK04 | |UniProt=E9PRE5,E9PK04 | ||
|association_with_transcript=0bp_to_ENST00000528315,ENST00000533803,ENST00000534191,uc010qwt.1_5end | |association_with_transcript=0bp_to_ENST00000528315,ENST00000533803,ENST00000534191,uc010qwt.1_5end | ||
|cluster_id=chr11:826136..826180,+ | |||
|coexpression_cluster_id=C744 | |coexpression_cluster_id=C744 | ||
|description=CAGE_peak_2_at_EFCAB4A_5end | |description=CAGE_peak_2_at_EFCAB4A_5end | ||
|id=chr11:826136..826180,+ | |id=chr11:826136..826180,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006595;1.11e-09;86 | |||
|ontology_enrichment_disease=DOID:299!3.45e-13!25;DOID:5093!7.83e-10!4;DOID:1612!7.83e-10!4 | |ontology_enrichment_disease=DOID:299!3.45e-13!25;DOID:5093!7.83e-10!4;DOID:1612!7.83e-10!4 | ||
|ontology_enrichment_disease_v019=DOID:5093;1.17e-16;4!DOID:1612;1.17e-16;4!DOID:299;5.11e-11;25 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.40e-16,4;DOID:1612,1.40e-16,4;DOID:299,5.78e-11,25 | |||
|ontology_enrichment_uberon=UBERON:0004921!2.22e-15!129;UBERON:0004185!2.22e-15!129;UBERON:0007023!1.95e-13!115;UBERON:0004119!4.70e-13!169;UBERON:0000925!4.70e-13!169;UBERON:0006595!4.70e-13!169;UBERON:0001007!9.93e-13!155;UBERON:0001555!9.93e-13!155;UBERON:0007026!9.93e-13!155;UBERON:0000077!1.30e-10!130;UBERON:0005409!1.38e-09!35;UBERON:0000160!2.63e-08!27;UBERON:0001041!6.95e-08!98;UBERON:0000310!1.03e-07!10;UBERON:0006947!3.69e-07!3;UBERON:0004054!3.69e-07!3;UBERON:0000466!3.82e-07!126;UBERON:0001443!6.22e-07!11 | |ontology_enrichment_uberon=UBERON:0004921!2.22e-15!129;UBERON:0004185!2.22e-15!129;UBERON:0007023!1.95e-13!115;UBERON:0004119!4.70e-13!169;UBERON:0000925!4.70e-13!169;UBERON:0006595!4.70e-13!169;UBERON:0001007!9.93e-13!155;UBERON:0001555!9.93e-13!155;UBERON:0007026!9.93e-13!155;UBERON:0000077!1.30e-10!130;UBERON:0005409!1.38e-09!35;UBERON:0000160!2.63e-08!27;UBERON:0001041!6.95e-08!98;UBERON:0000310!1.03e-07!10;UBERON:0006947!3.69e-07!3;UBERON:0004054!3.69e-07!3;UBERON:0000466!3.82e-07!126;UBERON:0001443!6.22e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0004921;3.14e-10;33!UBERON:0000310;3.63e-10;10!UBERON:0001829;7.85e-10;2!UBERON:0003127;1.33e-09;2!UBERON:0000341;2.53e-09;2!UBERON:0001443;3.28e-09;11!UBERON:0005409;2.35e-07;22!UBERON:0001041;3.03e-07;14!UBERON:0001044;3.83e-07;6!UBERON:0003293;3.83e-07;6!UBERON:0003294;3.83e-07;6!UBERON:0010047;3.83e-07;6!UBERON:0003408;3.83e-07;6!UBERON:0000167;3.83e-07;6!UBERON:0001155;5.29e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,1.76e-13,118;UBERON:0007023,2.86e-13,114;UBERON:0001007,5.25e-11,145;UBERON:0001555,5.25e-11,145;UBERON:0007026,5.25e-11,145;UBERON:0000310,3.97e-10,10;UBERON:0001829,7.85e-10,2;UBERON:0003127,1.36e-09,2;UBERON:0004119,1.90e-09,160;UBERON:0000925,1.90e-09,160;UBERON:0006595,1.90e-09,160;UBERON:0000341,2.33e-09,2;UBERON:0001443,3.54e-09,11;UBERON:0000915,1.21e-08,52;UBERON:0001041,3.23e-08,87;UBERON:0001004,1.08e-07,74;UBERON:0000161,1.20e-07,36;UBERON:0001044,3.83e-07,6;UBERON:0003293,3.83e-07,6;UBERON:0003294,3.83e-07,6;UBERON:0010047,3.83e-07,6;UBERON:0000167,3.83e-07,6;UBERON:0001155,5.51e-07,9 | |||
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| ||
|short_description=p2@EFCAB4A | |short_description=p2@EFCAB4A | ||
}} | }} |
Latest revision as of 18:13, 24 September 2015
Short description: | p2@EFCAB4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_EFCAB4A_5end |
Coexpression cluster: | C744_breast_salivary_parotid_submaxillary_seminal_small_ductus |
Association with transcript: | 0bp_to_ENST00000528315, ENST00000533803, ENST00000534191, uc010qwt.1_5end |
EntrezGene: | EFCAB4A |
HGNC: | 28703 |
UniProt: | E9PRE5E9PK04 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 1.76e-13 | 118 |
adult organism | 2.86e-13 | 114 |
digestive system | 5.25e-11 | 145 |
digestive tract | 5.25e-11 | 145 |
primitive gut | 5.25e-11 | 145 |
breast | 3.97e-10 | 10 |
major salivary gland | 7.85e-10 | 2 |
open tracheal system trachea | 1.36e-09 | 2 |
endoderm-derived structure | 1.90e-09 | 160 |
endoderm | 1.90e-09 | 160 |
presumptive endoderm | 1.90e-09 | 160 |
throat | 2.33e-09 | 2 |
chest | 3.54e-09 | 11 |
thoracic segment of trunk | 1.21e-08 | 52 |
foregut | 3.23e-08 | 87 |
respiratory system | 1.08e-07 | 74 |
orifice | 1.20e-07 | 36 |
saliva-secreting gland | 3.83e-07 | 6 |
gland of oral region | 3.83e-07 | 6 |
gland of foregut | 3.83e-07 | 6 |
oral gland | 3.83e-07 | 6 |
oral cavity | 3.83e-07 | 6 |
colon | 5.51e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.40e-16 | 4 |
breast cancer | 1.40e-16 | 4 |
adenocarcinoma | 5.78e-11 | 25 |