FFCP PHASE1:Hg19::chr11:65430535..65430549,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5970 | |EntrezGene=5970 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9955 | |HGNC=9955 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=11bp_to_ENST00000308639_5end | |association_with_transcript=11bp_to_ENST00000308639_5end | ||
|cluster_id=chr11:65430535..65430549,- | |||
|coexpression_cluster_id=C7 | |coexpression_cluster_id=C7 | ||
|description=CAGE_peak_4_at_RELA_5end | |description=CAGE_peak_4_at_RELA_5end | ||
|id=chr11:65430535..65430549,- | |id=chr11:65430535..65430549,- | ||
|ontology_enrichment_celltype=CL:0002057!7.63e-19!42;CL:0000860!6.62e-18!45;CL:0000766!1.94e-12!76;CL:0002139!2.28e-12!24;CL:0000213!3.48e-11!57;CL:0000215!3.48e-11!57;CL:0000071!3.06e-10!18;CL:0002546!3.06e-10!18;CL:0000115!3.85e-10!35;CL:0002078!6.22e-10!44;CL:0000557!1.15e-09!71;CL:0002009!2.77e-09!65;CL:0000076!6.30e-09!62;CL:0000839!8.51e-09!70;CL:0002194!1.96e-08!63;CL:0000576!1.96e-08!63;CL:0000040!1.96e-08!63;CL:0000559!1.96e-08!63;CL:0000738!4.90e-08!140;CL:0000222!8.61e-08!119;CL:0000063!1.98e-07!578;CL:0002371!7.94e-07!591 | |ontology_enrichment_celltype=CL:0002057!7.63e-19!42;CL:0000860!6.62e-18!45;CL:0000766!1.94e-12!76;CL:0002139!2.28e-12!24;CL:0000213!3.48e-11!57;CL:0000215!3.48e-11!57;CL:0000071!3.06e-10!18;CL:0002546!3.06e-10!18;CL:0000115!3.85e-10!35;CL:0002078!6.22e-10!44;CL:0000557!1.15e-09!71;CL:0002009!2.77e-09!65;CL:0000076!6.30e-09!62;CL:0000839!8.51e-09!70;CL:0002194!1.96e-08!63;CL:0000576!1.96e-08!63;CL:0000040!1.96e-08!63;CL:0000559!1.96e-08!63;CL:0000738!4.90e-08!140;CL:0000222!8.61e-08!119;CL:0000063!1.98e-07!578;CL:0002371!7.94e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.24e-38;33!CL:0002057;1.24e-38;33!CL:0000473;1.38e-27;39!CL:0000234;1.38e-27;39!CL:0002139;2.32e-18;24!CL:0000576;3.33e-18;48!CL:0000071;4.76e-16;18!CL:0000115;3.40e-15;36!CL:0000766;9.55e-14;69!CL:1000413;1.58e-12;9!CL:0002078;1.37e-10;45!CL:0000094;2.66e-09;8!CL:0002544;1.52e-08;6!CL:0000213;2.12e-08;58!CL:0000215;2.12e-08;58!CL:0000081;4.23e-08;11!CL:0002087;2.13e-07;104!CL:0000738;7.75e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.66e-35,42;CL:0002057,3.66e-35,42;CL:0000473,3.96e-31,48;CL:0000234,3.96e-31,48;CL:0000766,8.28e-30,72;CL:0000738,3.08e-25,136;CL:0002009,8.82e-25,61;CL:0000557,2.17e-24,67;CL:0002194,1.33e-22,59;CL:0000576,1.33e-22,59;CL:0000040,1.33e-22,59;CL:0000559,1.33e-22,59;CL:0000839,9.01e-22,66;CL:0000763,1.27e-19,108;CL:0000049,1.27e-19,108;CL:0002031,5.19e-19,120;CL:0002139,2.80e-18,24;CL:0000115,7.62e-18,36;CL:0002032,8.68e-18,161;CL:0000837,8.68e-18,161;CL:0002087,3.61e-17,115;CL:0000037,4.46e-17,168;CL:0000988,7.88e-17,177;CL:0000071,5.07e-16,18;CL:0002546,5.07e-16,18;CL:0002078,2.81e-15,45;CL:0000213,1.86e-14,58;CL:0000215,1.86e-14,58;CL:1000413,1.61e-12,9;CL:0000222,1.74e-09,121;CL:0000094,1.98e-09,8;CL:0002544,1.64e-08,6;CL:0000081,3.93e-08,11;CL:0000076,6.67e-08,63 | |||
|ontology_enrichment_development_v019=CL:0002057;3.89e-26;42!CL:0002546;4.76e-16;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!3.84e-15!216;UBERON:0000055!3.69e-12!69;UBERON:0001981!8.98e-12!60;UBERON:0007500!8.98e-12!60;UBERON:0004537!8.98e-12!60;UBERON:0006965!8.98e-12!60;UBERON:0001986!3.06e-10!18;UBERON:0004638!3.06e-10!18;UBERON:0004852!3.06e-10!18;UBERON:0002049!1.14e-09!79;UBERON:0007798!1.14e-09!79;UBERON:0003914!2.84e-09!118;UBERON:0004872!7.48e-09!84;UBERON:0002371!2.46e-08!80;UBERON:0001637!2.80e-08!42;UBERON:0003509!2.80e-08!42;UBERON:0004572!2.80e-08!42;UBERON:0000487!7.01e-08!22;UBERON:0006914!1.03e-07!25;UBERON:0000926!1.60e-07!448;UBERON:0004120!1.60e-07!448;UBERON:0006603!1.60e-07!448;UBERON:0004535!2.02e-07!110;UBERON:0001009!3.84e-07!113;UBERON:0001474!5.05e-07!86 | |ontology_enrichment_uberon=UBERON:0003081!3.84e-15!216;UBERON:0000055!3.69e-12!69;UBERON:0001981!8.98e-12!60;UBERON:0007500!8.98e-12!60;UBERON:0004537!8.98e-12!60;UBERON:0006965!8.98e-12!60;UBERON:0001986!3.06e-10!18;UBERON:0004638!3.06e-10!18;UBERON:0004852!3.06e-10!18;UBERON:0002049!1.14e-09!79;UBERON:0007798!1.14e-09!79;UBERON:0003914!2.84e-09!118;UBERON:0004872!7.48e-09!84;UBERON:0002371!2.46e-08!80;UBERON:0001637!2.80e-08!42;UBERON:0003509!2.80e-08!42;UBERON:0004572!2.80e-08!42;UBERON:0000487!7.01e-08!22;UBERON:0006914!1.03e-07!25;UBERON:0000926!1.60e-07!448;UBERON:0004120!1.60e-07!448;UBERON:0006603!1.60e-07!448;UBERON:0004535!2.02e-07!110;UBERON:0001009!3.84e-07!113;UBERON:0001474!5.05e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.76e-16;18!UBERON:0001986;4.76e-16;18!UBERON:0004852;4.76e-16;18!UBERON:0000487;4.51e-14;22!UBERON:0006914;2.04e-13;25!UBERON:0003915;1.58e-12;9!UBERON:0004700;1.58e-12;9!UBERON:0001917;1.58e-12;9!UBERON:0001637;3.06e-09;42!UBERON:0003509;3.06e-09;42!UBERON:0004572;3.06e-09;42!UBERON:0000490;5.57e-09;33!UBERON:0004573;1.44e-08;33!UBERON:0004571;1.44e-08;33!UBERON:0000055;1.82e-08;65!UBERON:0007500;3.35e-08;56!UBERON:0001981;3.35e-08;56!UBERON:0004537;3.35e-08;56!UBERON:0003914;7.99e-07;74 | |||
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|short_description=p4@RELA | |short_description=p4@RELA | ||
}} | }} |
Latest revision as of 10:39, 19 September 2015
Short description: | p4@RELA |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RELA_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 11bp_to_ENST00000308639_5end |
EntrezGene: | RELA |
HGNC: | 9955 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data