FFCP PHASE1:Hg19::chr17:79826634..79826655,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:79826634..79826655,-
|short_description=p20@ARHGDIA
|description=CAGE_peak_20_at_ARHGDIA_5end
|association_with_transcript=-135bp_to_BC007630_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=396 | |EntrezGene=396 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=678 | |HGNC=678 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-135bp_to_BC007630_5end | |||
|cluster_id=chr17:79826634..79826655,- | |||
|description=CAGE_peak_20_at_ARHGDIA_5end | |||
|id=chr17:79826634..79826655,- | |||
|ontology_enrichment_celltype=CL:0000222!1.56e-07!119;CL:0000071!4.72e-07!18;CL:0002546!4.72e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000071;2.79e-09;18!CL:1000413;3.94e-08;9!CL:0000115;8.92e-08;36!CL:0000359;1.10e-07;32!CL:0002139;1.57e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.95e-09,36;CL:0000071,2.44e-09,18;CL:0002546,2.44e-09,18;CL:1000413,2.39e-08,9;CL:0000359,6.97e-08,32;CL:0002139,1.94e-07,24;CL:0000222,4.17e-07,121 | |||
|ontology_enrichment_development_v019=CL:0002546;2.79e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!2.11e-13!84;UBERON:0001981!7.18e-12!60;UBERON:0007500!7.18e-12!60;UBERON:0004537!7.18e-12!60;UBERON:0006965!7.18e-12!60;UBERON:0001637!5.62e-10!42;UBERON:0003509!5.62e-10!42;UBERON:0004572!5.62e-10!42;UBERON:0000055!5.78e-10!69;UBERON:0003914!9.37e-09!118;UBERON:0002049!3.07e-08!79;UBERON:0007798!3.07e-08!79;UBERON:0000926!9.67e-08!448;UBERON:0004120!9.67e-08!448;UBERON:0006603!9.67e-08!448;UBERON:0004573!3.24e-07!33;UBERON:0004571!3.24e-07!33;UBERON:0001986!4.72e-07!18;UBERON:0004638!4.72e-07!18;UBERON:0004852!4.72e-07!18;UBERON:0003081!5.07e-07!216;UBERON:0000487!7.27e-07!22;UBERON:0004535!8.53e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0007500;5.89e-12;56!UBERON:0001981;5.89e-12;56!UBERON:0004537;5.89e-12;56!UBERON:0001637;2.23e-11;42!UBERON:0003509;2.23e-11;42!UBERON:0004572;2.23e-11;42!UBERON:0004638;2.79e-09;18!UBERON:0001986;2.79e-09;18!UBERON:0004852;2.79e-09;18!UBERON:0004573;5.80e-09;33!UBERON:0004571;5.80e-09;33!UBERON:0003513;1.40e-08;7!UBERON:0000490;1.52e-08;33!UBERON:0000487;1.76e-08;22!UBERON:0000055;2.06e-08;65!UBERON:0003915;3.94e-08;9!UBERON:0004700;3.94e-08;9!UBERON:0001917;3.94e-08;9!UBERON:0006914;4.10e-07;25!UBERON:0003914;4.63e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007500,4.72e-18,59;UBERON:0001981,4.72e-18,59;UBERON:0004537,4.72e-18,59;UBERON:0006965,4.72e-18,59;UBERON:0004872,1.30e-17,83;UBERON:0001637,1.19e-15,42;UBERON:0003509,1.19e-15,42;UBERON:0004572,1.19e-15,42;UBERON:0000055,1.72e-15,68;UBERON:0003914,5.61e-14,117;UBERON:0002049,2.87e-13,78;UBERON:0007798,2.87e-13,78;UBERON:0000490,1.92e-12,148;UBERON:0000926,3.86e-11,315;UBERON:0004120,3.86e-11,315;UBERON:0006603,3.86e-11,315;UBERON:0003081,9.90e-11,203;UBERON:0004535,1.02e-10,109;UBERON:0001009,3.64e-10,112;UBERON:0004573,3.79e-10,33;UBERON:0004571,3.79e-10,33;UBERON:0004638,2.44e-09,18;UBERON:0001986,2.44e-09,18;UBERON:0004852,2.44e-09,18;UBERON:0000487,1.23e-08,22;UBERON:0003513,2.32e-08,7;UBERON:0000483,2.36e-08,306;UBERON:0003915,2.39e-08,9;UBERON:0004700,2.39e-08,9;UBERON:0001917,2.39e-08,9;UBERON:0000119,4.11e-08,309;UBERON:0004111,4.66e-08,240;UBERON:0005256,9.17e-08,122;UBERON:0000025,1.14e-07,192;UBERON:0000923,1.23e-07,560;UBERON:0010316,1.23e-07,560;UBERON:0005291,1.23e-07,560;UBERON:0006598,1.23e-07,560;UBERON:0010317,1.23e-07,560;UBERON:0002532,1.23e-07,560;UBERON:0002050,2.10e-07,564;UBERON:0006914,3.04e-07,25;UBERON:0002100,3.10e-07,199;UBERON:0007503,3.35e-07,78;UBERON:0005423,7.67e-07,581 | |||
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| ||
|short_description=p20@ARHGDIA | |||
}} | }} |
Latest revision as of 09:00, 18 September 2015
Short description: | p20@ARHGDIA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_ARHGDIA_5end |
Coexpression cluster: | NA |
Association with transcript: | -135bp_to_BC007630_5end |
EntrezGene: | ARHGDIA |
HGNC: | 678 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.95e-09 | 36 |
blood vessel endothelial cell | 2.44e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.44e-09 | 18 |
endothelial cell of artery | 2.39e-08 | 9 |
vascular associated smooth muscle cell | 6.97e-08 | 32 |
endothelial cell of vascular tree | 1.94e-07 | 24 |
mesodermal cell | 4.17e-07 | 121 |