FFCP PHASE1:Hg19::chr11:64545165..64545175,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7536 | |EntrezGene=7536 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12950 | |HGNC=12950 | ||
|TSSclassifier=strong | |||
|UniProt=C9JJE2,B7Z1Q1,Q15637 | |UniProt=C9JJE2,B7Z1Q1,Q15637 | ||
|association_with_transcript=56bp_to_ENST00000433274,NM_001178031,uc010rnn.1_5end | |association_with_transcript=56bp_to_ENST00000433274,NM_001178031,uc010rnn.1_5end | ||
|cluster_id=chr11:64545165..64545175,- | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_32_at_SF1_5end | |description=CAGE_peak_32_at_SF1_5end | ||
|id=chr11:64545165..64545175,- | |id=chr11:64545165..64545175,- | ||
|ontology_enrichment_celltype=CL:0002032!1.98e-08!165;CL:0000837!1.98e-08!165;CL:0000738!4.00e-08!140;CL:0000037!4.60e-08!172;CL:0000566!4.60e-08!172;CL:0000988!4.27e-07!182 | |ontology_enrichment_celltype=CL:0002032!1.98e-08!165;CL:0000837!1.98e-08!165;CL:0000738!4.00e-08!140;CL:0000037!4.60e-08!172;CL:0000566!4.60e-08!172;CL:0000988!4.27e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000775;4.04e-47;3!CL:0000094;2.19e-31;8!CL:0000081;5.96e-23;11!CL:0000946;1.78e-16;1!CL:0002127;1.78e-16;1!CL:0000911;1.78e-16;1!CL:0000814;1.78e-16;1!CL:0000786;1.78e-16;1!CL:0000771;3.86e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,3.46e-47,3;CL:0000094,2.11e-31,8;CL:0000081,5.80e-23,11;CL:0002127,1.93e-16,1;CL:0000914,1.93e-16,1;CL:0000911,1.93e-16,1;CL:0000814,1.93e-16,1;CL:0002042,1.93e-16,1;CL:0002039,1.93e-16,1;CL:0002040,1.93e-16,1;CL:0002041,1.93e-16,1;CL:0000946,2.63e-16,1;CL:0000786,2.63e-16,1;CL:0000980,2.63e-16,1;CL:0000771,4.02e-09,2;CL:0000893,6.94e-09,2;CL:0002489,6.94e-09,2;CL:0000809,6.94e-09,2;CL:0000808,6.94e-09,2;CL:0000894,6.94e-09,2;CL:0000806,6.94e-09,2;CL:0000807,6.94e-09,2;CL:0000805,6.94e-09,2;CL:0002425,6.94e-09,2;CL:0000785,8.09e-09,2;CL:0000955,8.09e-09,2;CL:0000818,8.09e-09,2;CL:0000954,8.09e-09,2;CL:0000816,8.09e-09,2 | |||
|ontology_enrichment_development_v019=CL:0000954;6.67e-09;2!CL:0002425;6.67e-09;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.38e-09!102;UBERON:0003061!1.38e-09!102;UBERON:0000178!3.90e-08!15;UBERON:0000179!3.90e-08!15;UBERON:0000463!3.90e-08!15;UBERON:0002193!8.83e-08!112 | |ontology_enrichment_uberon=UBERON:0002390!1.38e-09!102;UBERON:0003061!1.38e-09!102;UBERON:0000178!3.90e-08!15;UBERON:0000179!3.90e-08!15;UBERON:0000463!3.90e-08!15;UBERON:0002193!8.83e-08!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.54e-16;15!UBERON:0000179;1.54e-16;15!UBERON:0000463;1.54e-16;15!UBERON:0002390;2.09e-11;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.89e-16,15;UBERON:0000179,1.89e-16,15;UBERON:0000463,1.89e-16,15;UBERON:0004177,1.18e-09,7;UBERON:0005057,1.18e-09,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0.154816123316076,0.919421224478927,0,0,0.309868802321207,0.142169232487422,0,0,0.200544447470142,0.217010870715852,0,0,0,0.436194716338694,0,0.242584061187816,0.232429036905685,0,0.619412741790207,0.28769239232215,0.256160706529101,0,0.344745680736619,0.645484683583826,0,0,0,0.224723484445085,0.612167784741805,0.320929027076094,0.639337125799041,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0.425208599930087,0.209658645508376,0,0,0.16072558669708,0.285012743741249,0.99458338599545,0.730656615058536,0,0.546138611262131,0,0,0.800791974072025,0,0,0,0,0,0,0,0,0,0.983548850569165,0,0.411202997999018,0,0.32592226663359,0,0,0.222820913770347,0,0,0,0.25618263945135,0,0.164437904603676,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0.403213486449465,0.802320587350522,0.434473211648397,0,0.670700859703636,0,0,0,0.144846518960824,0,0,0.189069634328136,0,0.263504357079378,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.417989933073621,0,0,0,0.402829317109147,0,0,0,0,0,0,0.112611480483322,1.53316637465883,0,0.183201743930407,5.27121669744253,0,0,0,0,0.132409180813219,0,0,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0.323292113637624,0,0,0,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0.0895585227028483,0,0,0.492663237895943,0,0.414656231081544,0.288239906833923,0.12624243342638,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12085143993527,0.394061520403854,0.431255149719035,0.128343036279748,0,0,0,0,0,2.99602809578873,5.9832291840805,6.63064821497657,0,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0.184369168541703,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0.114814448164607,0,0,0,0.0770153371044148,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0.27470839445503,0.082509499920588,0.574265537996172,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0.165284915360978,0,0.127612712494584,0.10115778085555,0.464845549297286,0.31481234683064,0,0,0.532306030317022,0,0.18532421910392,0.143124886741991,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0.975267478179181,0.487426979262569,0,0.272999822815972,0.141405431953713,0,0,0,0.876901770507525,0,0,0.405820753925408,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,1.01489521846434,0.764637207142375,1.13929437434833,0.714695326373367,0.411362273086194,0.648473311192717,1.08006287447623,0.79312517629427,0,0,0.245040215981032,0.185803175125719,0,0.142283686696828,0.159426272728822,0,0,0.211673582723883,0,0,0,0.156679895773023,0,0.677167111206413,0.1605880751037,0,0.851692475380653,0.687010689511529,0.307240764308458,0,0.333698283423817,0.19538809540204,0,0,0.270455678475983,0,0,0,0,0.121360521749513,0.111443384277478,0,0,0,0,0,0,0.111308705022906,0,0.422250816255987,0,0,0.251932747854276,0.20453736500431,0.246169610922139,0,0.179736702294654,0,0.511572370226872,0,2.3948309234694,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0.583209226766509,0,0,0,0,0,0,0,0,0.557694977114413,0.0769502585037971,0.341826167541004,0,0,0.108647371922008,0,0.0915975934018623,0,0,0,0,0,0,0,0.37950746544837,0,0,0,0.141353071433941,0,0,0,0,0.889563386041866,0,0,0.134802265961354,0,0.702793337176017,0,0,0.242780379534093,0,0,0,0,0.450970258243478,0,0,0,0,0,0.284609546029793,0,0,0.293977192243133,0.34823682632161,0,0,0.19351266257817,0.0730893170861856,0,0,0,0,0,0,0.0633107959558787,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0.203996435272644,0.288950589901519,0,0,0,0,0.262887354279314,0,0,0,0,0,0.89268582976749,0.0671834724867263,0,0,0,0.0824158583811665,0,0.0984274815147488,0.169346664131569,0,0.136203406111576,0,0,0,0.2249738915515,0.77380195455795,0.0607495566580247,0,0.0788057072991982,0.157363764404994,0.316801009558219,0,0.191915197319445,0,0.662091970365432,0,0,0,0,0,0.328370082997356,0.170388021785422,0.113312091520126,0,0,0.129282956361551,0,0,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0.366078794705889,0,0,0.110929051536852,0.0620964029413835,0,0.124980407962107,0,0,0,0,0,0.447764408660622,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0.155262956876259,0,0,0.521745061811734,0,0.380805212168795,0,0,0,0,0,0.800055529326307,0,0,0,0,0.643324774124777,0,0,0,0,0.358177682162975,0,0,0,0.192914038270915,0.168942440653073,0,0,0,0,0.194860308839388,0,0.163565394255844,0.327609848846413,0,0,0.39997479170986,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0.39430872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| ||
|short_description=p32@SF1 | |short_description=p32@SF1 | ||
}} | }} |
Latest revision as of 04:30, 19 September 2015
Short description: | p32@SF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_32_at_SF1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 56bp_to_ENST00000433274, NM_001178031, uc010rnn.1_5end |
EntrezGene: | SF1 |
HGNC: | 12950 |
UniProt: | C9JJE2B7Z1Q1Q15637 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 3.46e-47 | 3 |
granulocyte | 2.11e-31 | 8 |
blood cell | 5.80e-23 | 11 |
innate effector T cell | 1.93e-16 | 1 |
immature NK T cell | 1.93e-16 | 1 |
effector T cell | 1.93e-16 | 1 |
mature NK T cell | 1.93e-16 | 1 |
immature NK T cell stage IV | 1.93e-16 | 1 |
immature NK T cell stage I | 1.93e-16 | 1 |
immature NK T cell stage II | 1.93e-16 | 1 |
immature NK T cell stage III | 1.93e-16 | 1 |
antibody secreting cell | 2.63e-16 | 1 |
plasma cell | 2.63e-16 | 1 |
plasmablast | 2.63e-16 | 1 |
eosinophil | 4.02e-09 | 2 |
thymocyte | 6.94e-09 | 2 |
double negative thymocyte | 6.94e-09 | 2 |
double-positive, alpha-beta thymocyte | 6.94e-09 | 2 |
DN4 thymocyte | 6.94e-09 | 2 |
DN1 thymic pro-T cell | 6.94e-09 | 2 |
DN2 thymocyte | 6.94e-09 | 2 |
DN3 thymocyte | 6.94e-09 | 2 |
immature single positive thymocyte | 6.94e-09 | 2 |
early T lineage precursor | 6.94e-09 | 2 |
mature B cell | 8.09e-09 | 2 |
pre-B-II cell | 8.09e-09 | 2 |
transitional stage B cell | 8.09e-09 | 2 |
small pre-B-II cell | 8.09e-09 | 2 |
immature B cell | 8.09e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 1.89e-16 | 15 |
haemolymphatic fluid | 1.89e-16 | 15 |
organism substance | 1.89e-16 | 15 |
hemopoietic organ | 1.18e-09 | 7 |
immune organ | 1.18e-09 | 7 |