FFCP PHASE1:Hg19::chr11:5617365..5617376,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=117854 | |EntrezGene=117854 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16277 | |HGNC=16277 | ||
|TSSclassifier=strong | |||
|UniProt=E9PFM0 | |UniProt=E9PFM0 | ||
|association_with_transcript=6bp_to_ENST00000380107_5end | |association_with_transcript=6bp_to_ENST00000380107_5end | ||
|cluster_id=chr11:5617365..5617376,+ | |||
|coexpression_cluster_id=C45 | |coexpression_cluster_id=C45 | ||
|description=CAGE_peak_5_at_TRIM6_5end | |description=CAGE_peak_5_at_TRIM6_5end | ||
|id=chr11:5617365..5617376,+ | |id=chr11:5617365..5617376,+ | ||
|ontology_enrichment_celltype=CL:0000039!4.25e-17!7;CL:0000586!4.25e-17!7;CL:0002322!6.75e-13!5 | |ontology_enrichment_celltype=CL:0000039!4.25e-17!7;CL:0000586!4.25e-17!7;CL:0002322!6.75e-13!5 | ||
|ontology_enrichment_celltype_v019=CL:0002322;1.93e-57;5!CL:0000039;1.57e-41;7!CL:0000586;1.57e-41;7!CL:0002321;1.64e-19;15!CL:0000148;7.48e-17;10!CL:0000147;3.13e-12;14!CL:0000710;9.61e-09;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.80e-57,5;CL:0000039,1.49e-41,7;CL:0000586,1.49e-41,7;CL:0000148,6.54e-17,10;CL:0000541,6.54e-17,10;CL:0000147,2.84e-12,14;CL:0000710,8.99e-09,20 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.12e-17;10!UBERON:0005564;5.12e-17;10 | |||
|ontology_enrichment_disease=DOID:3095!4.06e-09!22;DOID:2994!4.06e-09!22 | |ontology_enrichment_disease=DOID:3095!4.06e-09!22;DOID:2994!4.06e-09!22 | ||
|ontology_enrichment_disease_v019=DOID:1799;1.08e-19;1!DOID:10165;1.08e-19;1!DOID:1798;1.08e-19;1!DOID:3095;1.56e-13;22!DOID:2994;1.56e-13;22 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,1.08e-19,1;DOID:10165,1.08e-19,1;DOID:1798,1.08e-19,1;DOID:3095,1.54e-13,22;DOID:2994,1.54e-13,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.88e-10!8;UBERON:0003135!2.36e-07!11 | |ontology_enrichment_uberon=UBERON:0000473!1.88e-10!8;UBERON:0003135!2.36e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;4.34e-21;8!UBERON:0003135;1.56e-15;11!UBERON:0000922;4.11e-11;49!UBERON:0000991;1.97e-08;21!UBERON:0003101;4.49e-08;22!UBERON:0000079;4.49e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.42e-21,8;UBERON:0003135,1.31e-15,11;UBERON:0000991,1.80e-08,21;UBERON:0009196,1.80e-08,21;UBERON:0009117,1.80e-08,21;UBERON:0005564,1.80e-08,21;UBERON:0004176,4.13e-08,22;UBERON:0003101,4.13e-08,22;UBERON:0000079,4.13e-08,22 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0.225222960966644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0.609868530647977,1.19276791489337,1.39432731443422,1.34759371519982,2.27088765788066,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.245976877086227,0.171567810298526,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0.270455678475983,0.99921590399346,0,0,0.146508179271894,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0,0,0,0,0,0,0.306806047506464,0.123084805461069,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0.69169171316418,0.359030577639089,1.08647371922008,0.31900115973192,0.183195186803725,0,0,0,0,0.225595660617181,0.19606253431774,0.335643173951685,0,0,0.421996129056054,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0.063186579628488,0.300646838828985,0.414752765588989,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0.0969890164884194,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.964518890790115,1.2378549293751,0.83088067605837,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40478702825849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709618961301111,0,0,0.0679697329768317,0,0,0,0,0,0.840816489941367,0,0.215927591218621,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0.126166424835079,0.655593431782173,0.760191006068622,2.65170957329153,0.534434810531121,6.24885316836945,1.50424523575425,0.0757786982182394,0,0,0,0.213233981900981,0,0.0645889098360061,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0.320568492303233 | ||
|short_description=p5@TRIM6 | |short_description=p5@TRIM6 | ||
}} | }} |
Latest revision as of 08:13, 18 September 2015
Short description: | p5@TRIM6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TRIM6_5end |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | 6bp_to_ENST00000380107_5end |
EntrezGene: | TRIM6 |
HGNC: | 16277 |
UniProt: | E9PFM0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.80e-57 | 5 |
germ line cell | 1.49e-41 | 7 |
germ cell | 1.49e-41 | 7 |
melanocyte | 6.54e-17 | 10 |
melanoblast | 6.54e-17 | 10 |
pigment cell | 2.84e-12 | 14 |
neurecto-epithelial cell | 8.99e-09 | 20 |
Ontology term | p-value | n |
---|---|---|
testis | 3.42e-21 | 8 |
male reproductive organ | 1.31e-15 | 11 |
gonad | 1.80e-08 | 21 |
indifferent external genitalia | 1.80e-08 | 21 |
indifferent gonad | 1.80e-08 | 21 |
gonad primordium | 1.80e-08 | 21 |
external genitalia | 4.13e-08 | 22 |
male organism | 4.13e-08 | 22 |
male reproductive system | 4.13e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 1.08e-19 | 1 |
endocrine pancreas cancer | 1.08e-19 | 1 |
pancreatic endocrine carcinoma | 1.08e-19 | 1 |
germ cell and embryonal cancer | 1.54e-13 | 22 |
germ cell cancer | 1.54e-13 | 22 |