FFCP PHASE1:Hg19::chr17:79359021..79359029,-: Difference between revisions
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|id=chr17:79359021..79359029,-
|short_description=p@chr17:79359021..79359029,-
|description=CAGE_peak_at_chr17:79359021..79359029,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:79359021..79359029,- | |||
|coexpression_cluster_id=C327 | |||
|description=CAGE_peak_at_chr17:79359021..79359029,- | |||
|id=chr17:79359021..79359029,- | |||
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|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1909!5.13e-11!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;4.08e-27;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,2.39e-27,2 | |||
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|short_description=p@chr17:79359021..79359029,- | |||
}} | }} |
Latest revision as of 22:40, 25 July 2015
Short description: | p@chr17:79359021..79359029, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:79359021..79359029, - |
Coexpression cluster: | C327_Melanocyte_corpus_thalamus_substantia_melanoma_globus_optic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 9.77e-65 | 10 |
melanoblast | 9.77e-65 | 10 |
pigment cell | 3.63e-46 | 14 |
light melanocyte | 2.56e-40 | 3 |
neurecto-epithelial cell | 3.23e-32 | 20 |
columnar/cuboidal epithelial cell | 9.22e-24 | 27 |
ecto-epithelial cell | 8.89e-19 | 34 |
dark melanocyte | 4.73e-15 | 1 |
migratory neural crest cell | 9.59e-15 | 41 |
neurectodermal cell | 3.11e-10 | 59 |
ectodermal cell | 2.47e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
corpus callosum | 1.41e-14 | 1 |
central nervous system cell part cluster | 1.41e-14 | 1 |
axon tract | 1.41e-14 | 1 |
intercerebral commissure | 1.41e-14 | 1 |
dorsal telencephalic commissure | 1.41e-14 | 1 |
brain white matter | 1.41e-14 | 1 |
brain commissure | 1.41e-14 | 1 |
white matter | 1.41e-14 | 1 |
nervous system commissure | 1.41e-14 | 1 |
cerebral hemisphere white matter | 1.41e-14 | 1 |
olfactory region | 1.61e-14 | 1 |
primary subdivision of skull | 1.61e-14 | 1 |
cranium | 1.61e-14 | 1 |
neurocranium | 1.61e-14 | 1 |
chondrocranium | 1.61e-14 | 1 |
cartilaginous neurocranium | 1.61e-14 | 1 |
head paraxial mesoderm | 1.61e-14 | 1 |
substantia nigra | 2.11e-14 | 1 |
midbrain nucleus | 2.11e-14 | 1 |
regional part of midbrain | 2.11e-14 | 1 |
midbrain | 2.11e-14 | 1 |
presumptive midbrain | 2.11e-14 | 1 |
midbrain neural tube | 2.11e-14 | 1 |
telencephalic nucleus | 2.23e-08 | 7 |
multi cell component structure | 6.15e-08 | 2 |
neuron projection bundle | 6.15e-08 | 2 |
head mesenchyme | 6.58e-08 | 2 |
dorsal plus ventral thalamus | 8.04e-08 | 2 |
thalamic complex | 8.04e-08 | 2 |
globus pallidus | 8.60e-08 | 2 |
pallidum | 8.60e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.39e-27 | 2 |