FFCP PHASE1:Hg19::chr11:3210693..3210702,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-73bp_to_ENST00000455154_5end | |association_with_transcript=-73bp_to_ENST00000455154_5end | ||
|cluster_id=chr11:3210693..3210702,+ | |||
|coexpression_cluster_id=C49 | |coexpression_cluster_id=C49 | ||
|description=CAGE_peak_1_at_ENST00000455154_5end | |description=CAGE_peak_1_at_ENST00000455154_5end | ||
|id=chr11:3210693..3210702,+ | |id=chr11:3210693..3210702,+ | ||
|ontology_enrichment_celltype=CL:0002322!1.32e-58!5;CL:0000039!2.54e-27!7;CL:0000586!2.54e-27!7;CL:0000148!3.50e-11!10;CL:0000541!3.50e-11!10;CL:0000540!1.08e-08!6;CL:0000031!1.08e-08!6;CL:0000404!1.08e-08!6;CL:0000147!3.87e-08!14;CL:0000047!9.94e-07!8 | |ontology_enrichment_celltype=CL:0002322!1.32e-58!5;CL:0000039!2.54e-27!7;CL:0000586!2.54e-27!7;CL:0000148!3.50e-11!10;CL:0000541!3.50e-11!10;CL:0000540!1.08e-08!6;CL:0000031!1.08e-08!6;CL:0000404!1.08e-08!6;CL:0000147!3.87e-08!14;CL:0000047!9.94e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.44e-23;7!CL:0000586;1.44e-23;7!CL:0002322;2.97e-09;5!CL:0000128;5.70e-07;7!CL:0000126;5.70e-07;7!CL:0000127;5.70e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.14e-23,7;CL:0000586,1.14e-23,7;CL:0002322,3.22e-09,5;CL:0000128,6.39e-07,7;CL:0000126,6.39e-07,7;CL:0000127,6.39e-07,7;CL:0002453,6.39e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;7.50e-17;10!UBERON:0005564;7.50e-17;10 | |||
|ontology_enrichment_disease=DOID:3095!7.17e-19!22;DOID:2994!7.17e-19!22 | |ontology_enrichment_disease=DOID:3095!7.17e-19!22;DOID:2994!7.17e-19!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;3.15e-08;22!DOID:2994;3.15e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.93e-08,22;DOID:2994,2.93e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!5.90e-24!8;UBERON:0003135!1.63e-17!11;UBERON:0000991!5.13e-14!21;UBERON:0009196!5.13e-14!21;UBERON:0009117!5.13e-14!21;UBERON:0005564!5.13e-14!21;UBERON:0004176!2.23e-13!22;UBERON:0003101!7.04e-09!22;UBERON:0000079!7.04e-09!22 | |ontology_enrichment_uberon=UBERON:0000473!5.90e-24!8;UBERON:0003135!1.63e-17!11;UBERON:0000991!5.13e-14!21;UBERON:0009196!5.13e-14!21;UBERON:0009117!5.13e-14!21;UBERON:0005564!5.13e-14!21;UBERON:0004176!2.23e-13!22;UBERON:0003101!7.04e-09!22;UBERON:0000079!7.04e-09!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.97e-21;8!UBERON:0003135;2.02e-15;11!UBERON:0000991;1.42e-08;21!UBERON:0003101;3.15e-08;22!UBERON:0000079;3.15e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,7.35e-21,8;UBERON:0003135,1.74e-15,11;UBERON:0000991,1.32e-08,21;UBERON:0009196,1.32e-08,21;UBERON:0009117,1.32e-08,21;UBERON:0005564,1.32e-08,21;UBERON:0004176,2.93e-08,22;UBERON:0003101,2.93e-08,22;UBERON:0000079,2.93e-08,22 | |||
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|short_description=p1@ENST00000455154 | |short_description=p1@ENST00000455154 | ||
}} | }} |
Latest revision as of 21:32, 23 July 2015
Short description: | p1@ENST00000455154 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000455154_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | -73bp_to_ENST00000455154_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.14e-23 | 7 |
germ cell | 1.14e-23 | 7 |
embryonic stem cell | 3.22e-09 | 5 |
oligodendrocyte | 6.39e-07 | 7 |
macroglial cell | 6.39e-07 | 7 |
astrocyte | 6.39e-07 | 7 |
oligodendrocyte precursor cell | 6.39e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 7.35e-21 | 8 |
male reproductive organ | 1.74e-15 | 11 |
gonad | 1.32e-08 | 21 |
indifferent external genitalia | 1.32e-08 | 21 |
indifferent gonad | 1.32e-08 | 21 |
gonad primordium | 1.32e-08 | 21 |
external genitalia | 2.93e-08 | 22 |
male organism | 2.93e-08 | 22 |
male reproductive system | 2.93e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.93e-08 | 22 |
germ cell cancer | 2.93e-08 | 22 |