FFCP PHASE1:Hg19::chr17:79027155..79027171,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:79027155..79027171,+
|short_description=p@chr17:79027155..79027171,+
|description=CAGE_peak_at_chr17:79027155..79027171,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:79027155..79027171,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_at_chr17:79027155..79027171,+ | |||
|id=chr17:79027155..79027171,+ | |||
|ontology_enrichment_celltype=CL:0002586!5.09e-08!3;CL:0000064!8.48e-08!3;CL:0005012!8.48e-08!3;CL:0000067!8.48e-08!3;CL:0002304!8.48e-08!3;CL:0000128!9.76e-08!7;CL:0000126!9.76e-08!7;CL:0000127!9.76e-08!7;CL:0002453!9.76e-08!7;CL:0002319!1.12e-07!25;CL:0002605!1.88e-07!3;CL:0000221!6.21e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0002586;4.63e-16;3!CL:0000149;3.50e-12;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,4.88e-16,3;CL:0000149,3.64e-12,4 | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.42e-15;82!UBERON:0006238;9.33e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p@chr17:79027155..79027171,+ | |||
}} | }} |
Latest revision as of 22:36, 25 July 2015
Short description: | p@chr17:79027155..79027171, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:79027155..79027171, + |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 4.88e-16 | 3 |
visual pigment cell | 3.64e-12 | 4 |