FFCP PHASE1:Hg19::chr11:14992712..14992724,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=796 | |EntrezGene=796 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1437 | |HGNC=1437 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=18bp_to_HQ448410_5end | |association_with_transcript=18bp_to_HQ448410_5end | ||
|cluster_id=chr11:14992712..14992724,- | |||
|coexpression_cluster_id=C94 | |coexpression_cluster_id=C94 | ||
|description=CAGE_peak_2_at_CALCA_5end | |description=CAGE_peak_2_at_CALCA_5end | ||
|id=chr11:14992712..14992724,- | |id=chr11:14992712..14992724,- | ||
|ontology_enrichment_celltype=CL:0002553!6.44e-16!1;CL:0000167!7.46e-16!1;CL:0000164!7.46e-16!1;CL:0000502!7.46e-16!1;CL:0000172!7.46e-16!1;CL:0000173!7.46e-16!1;CL:0002351!7.46e-16!1 | |ontology_enrichment_celltype=CL:0002553!6.44e-16!1;CL:0000167!7.46e-16!1;CL:0000164!7.46e-16!1;CL:0000502!7.46e-16!1;CL:0000172!7.46e-16!1;CL:0000173!7.46e-16!1;CL:0002351!7.46e-16!1 | ||
|ontology_enrichment_celltype_v019=CL:0002553;2.42e-50;1!CL:0000167;3.99e-50;1!CL:0000164;3.99e-50;1!CL:0000502;3.99e-50;1!CL:0000172;3.99e-50;1!CL:0000173;3.99e-50;1!CL:0000150;8.37e-07;9!CL:0000163;8.37e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,2.42e-50,1;CL:0000167,3.99e-50,1;CL:0000164,3.99e-50,1;CL:0000502,3.99e-50,1;CL:0000172,3.99e-50,1;CL:0000173,3.99e-50,1;CL:0002351,3.99e-50,1;CL:0000150,8.37e-07,9;CL:0000163,8.37e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002351;3.99e-50;1 | |||
|ontology_enrichment_disease=DOID:4430!7.46e-16!1;DOID:0050619!3.17e-15!1;DOID:1357!3.17e-15!1 | |ontology_enrichment_disease=DOID:4430!7.46e-16!1;DOID:0050619!3.17e-15!1;DOID:1357!3.17e-15!1 | ||
|ontology_enrichment_disease_v019=DOID:4430;3.99e-50;1!DOID:169;1.44e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,3.99e-50,1;DOID:169,1.44e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0001764!3.17e-15!1;UBERON:0001825!3.17e-15!1;UBERON:0002046!2.25e-12!5;UBERON:0004117!2.25e-12!5;UBERON:0007689!2.25e-12!5;UBERON:0007123!2.25e-12!5;UBERON:0003091!2.25e-12!5;UBERON:0009722!3.65e-12!11;UBERON:0007690!3.65e-12!11;UBERON:0002368!3.81e-10!35;UBERON:0008814!4.49e-09!15;UBERON:0001905!1.50e-08!2;UBERON:0002757!1.50e-08!2;UBERON:0010134!1.50e-08!2;UBERON:0002784!1.50e-08!2;UBERON:0005408!1.50e-08!2;UBERON:0001899!1.50e-08!2;UBERON:0002148!2.15e-08!2;UBERON:0009662!2.15e-08!2;UBERON:0003127!2.48e-08!2;UBERON:0000949!7.02e-08!45 | |ontology_enrichment_uberon=UBERON:0001764!3.17e-15!1;UBERON:0001825!3.17e-15!1;UBERON:0002046!2.25e-12!5;UBERON:0004117!2.25e-12!5;UBERON:0007689!2.25e-12!5;UBERON:0007123!2.25e-12!5;UBERON:0003091!2.25e-12!5;UBERON:0009722!3.65e-12!11;UBERON:0007690!3.65e-12!11;UBERON:0002368!3.81e-10!35;UBERON:0008814!4.49e-09!15;UBERON:0001905!1.50e-08!2;UBERON:0002757!1.50e-08!2;UBERON:0010134!1.50e-08!2;UBERON:0002784!1.50e-08!2;UBERON:0005408!1.50e-08!2;UBERON:0001899!1.50e-08!2;UBERON:0002148!2.15e-08!2;UBERON:0009662!2.15e-08!2;UBERON:0003127!2.48e-08!2;UBERON:0000949!7.02e-08!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;9.18e-26;2!UBERON:0002757;9.18e-26;2!UBERON:0010134;9.18e-26;2!UBERON:0005408;9.18e-26;2!UBERON:0001899;9.18e-26;2!UBERON:0003296;1.29e-13;4!UBERON:0010133;1.29e-13;4!UBERON:0002784;1.29e-13;4!UBERON:0001894;2.35e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,9.18e-26,2;UBERON:0002757,9.18e-26,2;UBERON:0010134,9.18e-26,2;UBERON:0005408,9.18e-26,2;UBERON:0001899,9.18e-26,2;UBERON:0003296,1.29e-13,4;UBERON:0010133,1.29e-13,4;UBERON:0002784,1.29e-13,4;UBERON:0001894,2.35e-08,7;UBERON:0006222,2.35e-08,7 | |||
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|short_description=p2@CALCA | |short_description=p2@CALCA | ||
}} | }} |
Latest revision as of 22:19, 16 September 2015
Short description: | p2@CALCA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CALCA_5end |
Coexpression cluster: | C94_smallcell_adrenal_lung_nonsmall_small_somatostatinoma_teratocarcinoma |
Association with transcript: | 18bp_to_HQ448410_5end |
EntrezGene: | CALCA |
HGNC: | 1437 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 2.42e-50 | 1 |
peptide hormone secreting cell | 3.99e-50 | 1 |
enteroendocrine cell | 3.99e-50 | 1 |
type D enteroendocrine cell | 3.99e-50 | 1 |
somatostatin secreting cell | 3.99e-50 | 1 |
pancreatic D cell | 3.99e-50 | 1 |
progenitor cell of endocrine pancreas | 3.99e-50 | 1 |
glandular epithelial cell | 8.37e-07 | 9 |
endocrine cell | 8.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
pineal body | 9.18e-26 | 2 |
regional part of epithalamus | 9.18e-26 | 2 |
secretory circumventricular organ | 9.18e-26 | 2 |
circumventricular organ | 9.18e-26 | 2 |
epithalamus | 9.18e-26 | 2 |
gland of diencephalon | 1.29e-13 | 4 |
neuroendocrine gland | 1.29e-13 | 4 |
regional part of diencephalon | 1.29e-13 | 4 |
diencephalon | 2.35e-08 | 7 |
future diencephalon | 2.35e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 3.99e-50 | 1 |
neuroendocrine tumor | 1.44e-09 | 6 |