FFCP PHASE1:Hg19::chr11:14874249..14874272,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:14874249..14874272,- | |||
|coexpression_cluster_id=C121 | |coexpression_cluster_id=C121 | ||
|description=CAGE_peak_at_chr11:14874249..14874272,- | |description=CAGE_peak_at_chr11:14874249..14874272,- | ||
|id=chr11:14874249..14874272,- | |id=chr11:14874249..14874272,- | ||
|ontology_enrichment_celltype=CL:0000039!5.33e-16!7;CL:0000586!5.33e-16!7;CL:0002076!7.40e-11!43;CL:0000066!1.11e-10!254;CL:0000223!4.97e-09!59;CL:0002178!4.02e-08!3;CL:0002251!5.00e-07!21 | |ontology_enrichment_celltype=CL:0000039!5.33e-16!7;CL:0000586!5.33e-16!7;CL:0002076!7.40e-11!43;CL:0000066!1.11e-10!254;CL:0000223!4.97e-09!59;CL:0002178!4.02e-08!3;CL:0002251!5.00e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.95e-15;7!CL:0000586;1.95e-15;7!CL:0002127;1.61e-13;1!CL:0000911;1.61e-13;1!CL:0000814;1.61e-13;1!CL:0000167;6.82e-13;1!CL:0000164;6.82e-13;1!CL:0000502;6.82e-13;1!CL:0000172;6.82e-13;1!CL:0000173;6.82e-13;1!CL:0000333;2.47e-10;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.15e-15,7;CL:0000586,2.15e-15,7;CL:0002127,1.61e-13,1;CL:0000914,1.61e-13,1;CL:0000911,1.61e-13,1;CL:0000814,1.61e-13,1;CL:0002042,1.61e-13,1;CL:0002039,1.61e-13,1;CL:0002040,1.61e-13,1;CL:0002041,1.61e-13,1;CL:0000167,5.38e-13,1;CL:0000164,5.38e-13,1;CL:0000502,5.38e-13,1;CL:0000172,5.38e-13,1;CL:0000173,5.38e-13,1;CL:0002351,5.38e-13,1;CL:0000893,2.15e-07,2;CL:0002489,2.15e-07,2;CL:0000809,2.15e-07,2;CL:0000808,2.15e-07,2;CL:0000894,2.15e-07,2;CL:0000806,2.15e-07,2;CL:0000807,2.15e-07,2;CL:0000805,2.15e-07,2;CL:0002425,2.15e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002351;6.82e-13;1!UBERON:0009117;5.49e-11;10!UBERON:0005564;5.49e-11;10!CL:0002425;2.15e-07;2 | |||
|ontology_enrichment_disease=DOID:14566!1.04e-28!239;DOID:0050687!1.98e-28!143;DOID:162!1.89e-27!235;DOID:305!8.68e-24!106;DOID:0050686!1.23e-12!137;DOID:3119!3.30e-12!14;DOID:1749!1.15e-11!14;DOID:3095!7.64e-11!22;DOID:2994!7.64e-11!22;DOID:299!2.34e-07!25 | |ontology_enrichment_disease=DOID:14566!1.04e-28!239;DOID:0050687!1.98e-28!143;DOID:162!1.89e-27!235;DOID:305!8.68e-24!106;DOID:0050686!1.23e-12!137;DOID:3119!3.30e-12!14;DOID:1749!1.15e-11!14;DOID:3095!7.64e-11!22;DOID:2994!7.64e-11!22;DOID:299!2.34e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:3095;1.30e-18;22!DOID:2994;1.30e-18;22!DOID:169;4.44e-18;6!DOID:4960;2.32e-13;1!DOID:0070004;2.32e-13;1!DOID:4430;6.82e-13;1!DOID:171;4.31e-11;10!DOID:1749;3.55e-08;14!DOID:3493;3.18e-07;2!DOID:4074;4.42e-07;2!DOID:4905;4.42e-07;2!DOID:3498;4.42e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.43e-18,22;DOID:2994,1.43e-18,22;DOID:169,4.72e-18,6;DOID:0050687,1.82e-16,143;DOID:4960,2.32e-13,1;DOID:0070004,2.32e-13,1;DOID:4430,5.38e-13,1;DOID:162,2.26e-12,235;DOID:14566,4.50e-12,239;DOID:305,6.65e-12,106;DOID:171,4.46e-11,10;DOID:1749,3.42e-08,14;DOID:3493,3.28e-07,2;DOID:4074,4.69e-07,2;DOID:4905,4.69e-07,2;DOID:3498,4.69e-07,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.38e-13;8!UBERON:0000013;2.47e-10;5!UBERON:0002410;2.47e-10;5!UBERON:0003135;4.87e-10;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.51e-13,8;UBERON:0000013,2.84e-10,5;UBERON:0002410,2.84e-10,5;UBERON:0003135,5.18e-10,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619737604642413,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.234813287178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.644566922551274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0,0,0.826424576804891,0.192190067365106,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782560276832555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.11709188898084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0.1137934482855,0,0,0,0,0.347249989866585,0,0,0,0,0,0,0.32681539055697,0.83654246567162,0,0,0.69169171316418,0.0897576444097721,0.217294743844016,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0.649165919226273,0,0,0,0.889563386041866,0.370691816839509,0.208843899010911,0,0,0,0,0,1.21390189767046,0,0,0,0,0,0,0,0,0,0,0.284609546029793,1.8027707491708,0,0,0,0,0,0,0,0,0,0.176512253383001,0,0.137041924646751,0,0,0.391102765469606,0.160317640503067,0,0.599428828746391,0.576361668616424,0.229073192331831,0.514784993585894,4.17758914165634,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885847333632739,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0.767660789277781,0,0,0,0,0,0,0,0.410462603746695,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,5.74507131993164,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0.138348634936231,0,0,0.285465333544967,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,4.13315951185958,0,0,0.279759015438889,0,3.7089367678059,0,1.10086159299127,0,0,0,0,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0.490738592505128,0,0.183428598521679,0.115525666150338,0.381382095467167,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0.921871900446234,0,0,0,0,0,0,0,0.840816489941367,0,0,0,0,0,0,0.695433089210318,0,0,0,0,0,0.118332000730565,0.170426809518315,0,0.22910686854405,0.31020638566432,0,0,2.55190607399632,0,0,0,0,0,0,0,0,0.33883824611688,0,1.35866559210006,0,0,0.940634592723046,0,1.41405928260976,0,0,0,0,0,0,0,2.85686301769052,1.41157948686277,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,1.1218771271618,1.06886962106224,1.8378979906969,0.752122617877125,0,0,0,0,0,0,0,0.0620747142958579,0.560659312903067,0,0,0,0,0,0,0,0,0.320182037633146,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619737604642413,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.234813287178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.644566922551274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0,0,0.826424576804891,0.192190067365106,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782560276832555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.11709188898084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0.1137934482855,0,0,0,0,0.347249989866585,0,0,0,0,0,0,0.32681539055697,0.83654246567162,0,0,0.69169171316418,0.0897576444097721,0.217294743844016,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0.649165919226273,0,0,0,0.889563386041866,0.370691816839509,0.208843899010911,0,0,0,0,0,1.21390189767046,0,0,0,0,0,0,0,0,0,0,0.284609546029793,1.8027707491708,0,0,0,0,0,0,0,0,0,0.176512253383001,0,0.137041924646751,0,0,0.391102765469606,0.160317640503067,0,0.599428828746391,0.576361668616424,0.229073192331831,0.514784993585894,4.17758914165634,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885847333632739,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0.767660789277781,0,0,0,0,0,0,0,0.410462603746695,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,5.74507131993164,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0.138348634936231,0,0,0.285465333544967,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,4.13315951185958,0,0,0.279759015438889,0,3.7089367678059,0,1.10086159299127,0,0,0,0,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0.490738592505128,0,0.183428598521679,0.115525666150338,0.381382095467167,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0.921871900446234,0,0,0,0,0,0,0,0.840816489941367,0,0,0,0,0,0,0.695433089210318,0,0,0,0,0,0.118332000730565,0.170426809518315,0,0.22910686854405,0.31020638566432,0,0,2.55190607399632,0,0,0,0,0,0,0,0,0.33883824611688,0,1.35866559210006,0,0,0.940634592723046,0,1.41405928260976,0,0,0,0,0,0,0,2.85686301769052,1.41157948686277,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,1.1218771271618,1.06886962106224,1.8378979906969,0.752122617877125,0,0,0,0,0,0,0,0.0620747142958579,0.560659312903067,0,0,0,0,0,0,0,0,0.320182037633146,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:14874249..14874272,- | |short_description=p@chr11:14874249..14874272,- | ||
}} | }} |
Latest revision as of 20:19, 23 July 2015
Short description: | p@chr11:14874249..14874272, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:14874249..14874272, - |
Coexpression cluster: | C121_NK_Natural_CD8_CD4_anaplastic_chronic_B |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.15e-15 | 7 |
germ cell | 2.15e-15 | 7 |
innate effector T cell | 1.61e-13 | 1 |
immature NK T cell | 1.61e-13 | 1 |
effector T cell | 1.61e-13 | 1 |
mature NK T cell | 1.61e-13 | 1 |
immature NK T cell stage IV | 1.61e-13 | 1 |
immature NK T cell stage I | 1.61e-13 | 1 |
immature NK T cell stage II | 1.61e-13 | 1 |
immature NK T cell stage III | 1.61e-13 | 1 |
peptide hormone secreting cell | 5.38e-13 | 1 |
enteroendocrine cell | 5.38e-13 | 1 |
type D enteroendocrine cell | 5.38e-13 | 1 |
somatostatin secreting cell | 5.38e-13 | 1 |
pancreatic D cell | 5.38e-13 | 1 |
progenitor cell of endocrine pancreas | 5.38e-13 | 1 |
thymocyte | 2.15e-07 | 2 |
double negative thymocyte | 2.15e-07 | 2 |
double-positive, alpha-beta thymocyte | 2.15e-07 | 2 |
DN4 thymocyte | 2.15e-07 | 2 |
DN1 thymic pro-T cell | 2.15e-07 | 2 |
DN2 thymocyte | 2.15e-07 | 2 |
DN3 thymocyte | 2.15e-07 | 2 |
immature single positive thymocyte | 2.15e-07 | 2 |
early T lineage precursor | 2.15e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 1.51e-13 | 8 |
sympathetic nervous system | 2.84e-10 | 5 |
autonomic nervous system | 2.84e-10 | 5 |
male reproductive organ | 5.18e-10 | 11 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.43e-18 | 22 |
germ cell cancer | 1.43e-18 | 22 |
neuroendocrine tumor | 4.72e-18 | 6 |
cell type cancer | 1.82e-16 | 143 |
bone marrow cancer | 2.32e-13 | 1 |
myeloma | 2.32e-13 | 1 |
somatostatinoma | 5.38e-13 | 1 |
cancer | 2.26e-12 | 235 |
disease of cellular proliferation | 4.50e-12 | 239 |
carcinoma | 6.65e-12 | 106 |
neuroectodermal tumor | 4.46e-11 | 10 |
squamous cell carcinoma | 3.42e-08 | 14 |
signet ring cell adenocarcinoma | 3.28e-07 | 2 |
pancreas adenocarcinoma | 4.69e-07 | 2 |
pancreatic carcinoma | 4.69e-07 | 2 |
pancreatic ductal adenocarcinoma | 4.69e-07 | 2 |