FFCP PHASE1:Hg19::chr11:133907234..133907249,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=230bp_to_ENST00000531938_5end | |association_with_transcript=230bp_to_ENST00000531938_5end | ||
|cluster_id=chr11:133907234..133907249,+ | |||
|coexpression_cluster_id=C411 | |coexpression_cluster_id=C411 | ||
|description=CAGE_peak_3_at_ENST00000531938_5end | |description=CAGE_peak_3_at_ENST00000531938_5end | ||
|id=chr11:133907234..133907249,+ | |id=chr11:133907234..133907249,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000097;6.31e-26;5!CL:0000163;1.02e-14;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,7.18e-26,5;CL:0002028,7.18e-26,5;CL:0000163,1.10e-14,9 | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.92e-15;4!UBERON:0007284;1.92e-15;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.08e-14!115;UBERON:0002298!1.16e-11!8;UBERON:0001049!3.70e-07!57;UBERON:0005068!3.70e-07!57;UBERON:0006241!3.70e-07!57;UBERON:0007135!3.70e-07!57;UBERON:0002133!5.47e-07!2;UBERON:0002950!9.52e-07!2;UBERON:0001891!9.52e-07!2;UBERON:0009616!9.52e-07!2 | |ontology_enrichment_uberon=UBERON:0007023!8.08e-14!115;UBERON:0002298!1.16e-11!8;UBERON:0001049!3.70e-07!57;UBERON:0005068!3.70e-07!57;UBERON:0006241!3.70e-07!57;UBERON:0007135!3.70e-07!57;UBERON:0002133!5.47e-07!2;UBERON:0002950!9.52e-07!2;UBERON:0001891!9.52e-07!2;UBERON:0009616!9.52e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0002133;8.04e-30;2!UBERON:0003978;3.01e-20;3!UBERON:0000946;3.01e-20;3!UBERON:0000996;5.56e-16;1!UBERON:0002135;6.44e-16;1!UBERON:0002134;9.99e-16;1!UBERON:0005208;9.99e-16;1!UBERON:0004145;9.99e-16;1!UBERON:0005946;9.99e-16;1!UBERON:0005965;9.99e-16;1!UBERON:0002078;9.99e-16;1!UBERON:0004177;3.07e-12;5!UBERON:0005057;3.07e-12;5!UBERON:0002081;1.61e-08;2!UBERON:0002370;2.97e-08;2!UBERON:0005058;2.97e-08;2!UBERON:0009113;2.97e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002133,8.05e-30,2;UBERON:0003978,3.01e-20,3;UBERON:0009751,3.01e-20,3;UBERON:0000946,3.01e-20,3;UBERON:0002523,3.01e-20,3;UBERON:0005983,3.01e-20,3;UBERON:0002165,3.01e-20,3;UBERON:0002062,3.01e-20,3;UBERON:0007280,3.01e-20,3;UBERON:0000996,5.56e-16,1;UBERON:0002135,6.44e-16,1;UBERON:0002134,9.99e-16,1;UBERON:0005208,9.99e-16,1;UBERON:0005946,9.99e-16,1;UBERON:0005965,9.99e-16,1;UBERON:0002078,9.99e-16,1;UBERON:0004797,3.17e-09,7;UBERON:0004177,5.16e-09,7;UBERON:0005057,5.16e-09,7;UBERON:0002081,1.61e-08,2;UBERON:0010227,1.61e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0.28769239232215,0,0,0,0,0,0,0,0.674170453335254,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0.323292113637624,0.355009592516614,0,0,0,0,0,0,0,0,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28060927094849,2.30591925467138,2.27236380167484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,0,0.256686072559497,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.66725564062472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,6.21349085126742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0.996239941255349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89999830173917,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0.296521128680622,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.09918963689537,0,4.30723814746088,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0.408610218334727,0.160753148465019,0,0,0,0.77380195455795,0,0,0,2.93745693555989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39669780522807,0,0,0.106787412567695,0,0,0,0,0,0,0.544017803369474,0,0,0,0.157054096250234,0,0,0,0,2.21858103073705,0.558867626472451,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545545977607678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0.327628914576042,0,0,0,0,0,0,0.80057074828547,0,0,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0.527613733078862,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0.627944742804112,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0.102662806856247,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,3.73855750246748,0,0,0,0,0,0,0.716697915757256,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,1.56221329209236,0,0.151557396436479,0,0,0.517164979309476,0,0,0,1.80016671457988,0,0.445530107947154,0,0,0,0.26940821205835,0.573777643141411,0.332660356546013,0,0,0,0,0,0.122241444182866,0,31.9563251609046,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0.28769239232215,0,0,0,0,0,0,0,0.674170453335254,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0.323292113637624,0.355009592516614,0,0,0,0,0,0,0,0,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28060927094849,2.30591925467138,2.27236380167484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,0,0.256686072559497,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.66725564062472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,6.21349085126742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0.996239941255349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89999830173917,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0.296521128680622,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.09918963689537,0,4.30723814746088,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0.408610218334727,0.160753148465019,0,0,0,0.77380195455795,0,0,0,2.93745693555989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39669780522807,0,0,0.106787412567695,0,0,0,0,0,0,0.544017803369474,0,0,0,0.157054096250234,0,0,0,0,2.21858103073705,0.558867626472451,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545545977607678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0.327628914576042,0,0,0,0,0,0,0.80057074828547,0,0,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0.527613733078862,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0.627944742804112,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0.102662806856247,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,3.73855750246748,0,0,0,0,0,0,0.716697915757256,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,1.56221329209236,0,0.151557396436479,0,0,0.517164979309476,0,0,0,1.80016671457988,0,0.445530107947154,0,0,0,0.26940821205835,0.573777643141411,0.332660356546013,0,0,0,0,0,0.122241444182866,0,31.9563251609046,0,0 | ||
|short_description=p3@ENST00000531938 | |short_description=p3@ENST00000531938 | ||
}} | }} |
Latest revision as of 20:10, 23 July 2015
Short description: | p3@ENST00000531938 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000531938_5end |
Coexpression cluster: | C411_vagina_Mast_breast_heart_CD14_aorta_liver |
Association with transcript: | 230bp_to_ENST00000531938_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 7.18e-26 | 5 |
basophil mast progenitor cell | 7.18e-26 | 5 |
endocrine cell | 1.10e-14 | 9 |
Ontology term | p-value | n |
---|---|---|
atrioventricular valve | 8.05e-30 | 2 |
valve | 3.01e-20 | 3 |
cardiac mesenchyme | 3.01e-20 | 3 |
cardial valve | 3.01e-20 | 3 |
tunica intima | 3.01e-20 | 3 |
heart layer | 3.01e-20 | 3 |
endocardium | 3.01e-20 | 3 |
endocardial cushion | 3.01e-20 | 3 |
presumptive endocardium | 3.01e-20 | 3 |
vagina | 5.56e-16 | 1 |
mitral valve | 6.44e-16 | 1 |
tricuspid valve | 9.99e-16 | 1 |
right atrium valve | 9.99e-16 | 1 |
outflow tract of atrium | 9.99e-16 | 1 |
outflow part of right atrium | 9.99e-16 | 1 |
right cardiac atrium | 9.99e-16 | 1 |
blood vessel layer | 3.17e-09 | 7 |
hemopoietic organ | 5.16e-09 | 7 |
immune organ | 5.16e-09 | 7 |
cardiac atrium | 1.61e-08 | 2 |
future cardiac atrium | 1.61e-08 | 2 |