FFCP PHASE1:Hg19::chr11:118958646..118958653,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3145 | |EntrezGene=3145 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4982 | |HGNC=4982 | ||
|TSSclassifier=strong | |||
|UniProt=F5GY90 | |UniProt=F5GY90 | ||
|association_with_transcript=-39bp_to_ENST00000535253_5end | |association_with_transcript=-39bp_to_ENST00000535253_5end | ||
|cluster_id=chr11:118958646..118958653,+ | |||
|coexpression_cluster_id=C33 | |coexpression_cluster_id=C33 | ||
|description=CAGE_peak_4_at_HMBS_5end | |description=CAGE_peak_4_at_HMBS_5end | ||
|id=chr11:118958646..118958653,+ | |id=chr11:118958646..118958653,+ | ||
|ontology_enrichment_celltype=CL:0000764!4.31e-09!2;CL:0000765!4.31e-09!2;CL:0000050!4.31e-09!2;CL:0000038!4.31e-09!2;CL:0000558!4.31e-09!2;CL:0000547!4.31e-09!2;CL:0000549!4.31e-09!2;CL:0000550!4.31e-09!2;CL:0000552!4.31e-09!2 | |ontology_enrichment_celltype=CL:0000764!4.31e-09!2;CL:0000765!4.31e-09!2;CL:0000050!4.31e-09!2;CL:0000038!4.31e-09!2;CL:0000558!4.31e-09!2;CL:0000547!4.31e-09!2;CL:0000549!4.31e-09!2;CL:0000550!4.31e-09!2;CL:0000552!4.31e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0000764;1.59e-18;2!CL:0000558;1.59e-18;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.59e-18,2;CL:0000765,1.59e-18,2;CL:0000050,1.59e-18,2;CL:0000038,1.59e-18,2;CL:0000558,1.59e-18,2;CL:0000547,1.59e-18,2;CL:0000549,1.59e-18,2;CL:0000550,1.59e-18,2;CL:0000552,1.59e-18,2;CL:0000763,7.05e-11,108;CL:0000049,7.05e-11,108;CL:0002032,9.60e-08,161;CL:0000837,9.60e-08,161;CL:0000037,2.54e-07,168;CL:0000988,7.94e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!4.13e-23!8;DOID:1240!2.88e-18!39;DOID:8692!3.42e-15!31;DOID:2531!4.19e-13!51;DOID:0060083!4.19e-13!51 | |ontology_enrichment_disease=DOID:1036!4.13e-23!8;DOID:1240!2.88e-18!39;DOID:8692!3.42e-15!31;DOID:2531!4.19e-13!51;DOID:0060083!4.19e-13!51 | ||
|ontology_enrichment_disease_v019=DOID:1036;7.57e-51;8!DOID:8692;6.57e-30;31!DOID:1240;7.87e-22;39!DOID:2531;7.94e-14;51!DOID:0060083;7.94e-14;51!DOID:8552;8.53e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,7.86e-51,8;DOID:8692,4.53e-31,31;DOID:1240,6.43e-29,39;DOID:2531,1.20e-21,51;DOID:0060083,1.20e-21,51;DOID:8552,8.17e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!2.62e-08!15;UBERON:0000179!2.62e-08!15;UBERON:0000463!2.62e-08!15;UBERON:0003127!1.01e-07!2 | |ontology_enrichment_uberon=UBERON:0000178!2.62e-08!15;UBERON:0000179!2.62e-08!15;UBERON:0000463!2.62e-08!15;UBERON:0003127!1.01e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.86e-09;15!UBERON:0000179;5.86e-09;15!UBERON:0000463;5.86e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.32e-09,15;UBERON:0000179,6.32e-09,15;UBERON:0000463,6.32e-09,15 | |||
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| ||
|short_description=p4@HMBS | |short_description=p4@HMBS | ||
}} | }} |
Latest revision as of 02:50, 16 September 2015
Short description: | p4@HMBS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HMBS_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | -39bp_to_ENST00000535253_5end |
EntrezGene: | HMBS |
HGNC: | 4982 |
UniProt: | F5GY90 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.59e-18 | 2 |
erythroblast | 1.59e-18 | 2 |
megakaryocyte-erythroid progenitor cell | 1.59e-18 | 2 |
erythroid progenitor cell | 1.59e-18 | 2 |
reticulocyte | 1.59e-18 | 2 |
proerythroblast | 1.59e-18 | 2 |
basophilic erythroblast | 1.59e-18 | 2 |
polychromatophilic erythroblast | 1.59e-18 | 2 |
orthochromatic erythroblast | 1.59e-18 | 2 |
myeloid cell | 7.05e-11 | 108 |
common myeloid progenitor | 7.05e-11 | 108 |
hematopoietic oligopotent progenitor cell | 9.60e-08 | 161 |
hematopoietic multipotent progenitor cell | 9.60e-08 | 161 |
hematopoietic stem cell | 2.54e-07 | 168 |
hematopoietic cell | 7.94e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
blood | 6.32e-09 | 15 |
haemolymphatic fluid | 6.32e-09 | 15 |
organism substance | 6.32e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 7.86e-51 | 8 |
myeloid leukemia | 4.53e-31 | 31 |
leukemia | 6.43e-29 | 39 |
hematologic cancer | 1.20e-21 | 51 |
immune system cancer | 1.20e-21 | 51 |
chronic myeloid leukemia | 8.17e-10 | 1 |