FFCP PHASE1:Hg19::chr10:125804230..125804253,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:125804230..125804253,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_at_chr10:125804230..125804253,- | |description=CAGE_peak_at_chr10:125804230..125804253,- | ||
|id=chr10:125804230..125804253,- | |id=chr10:125804230..125804253,- | ||
|ontology_enrichment_celltype=CL:0002057!5.71e-16!42;CL:0000860!5.88e-16!45;CL:0002194!1.15e-12!63;CL:0000576!1.15e-12!63;CL:0000040!1.15e-12!63;CL:0000559!1.15e-12!63;CL:0002009!4.51e-12!65;CL:0000839!9.68e-11!70;CL:0000557!1.69e-10!71;CL:0000766!2.19e-09!76;CL:0002541!2.65e-07!3;CL:0000763!5.43e-07!112;CL:0000049!5.43e-07!112 | |ontology_enrichment_celltype=CL:0002057!5.71e-16!42;CL:0000860!5.88e-16!45;CL:0002194!1.15e-12!63;CL:0000576!1.15e-12!63;CL:0000040!1.15e-12!63;CL:0000559!1.15e-12!63;CL:0002009!4.51e-12!65;CL:0000839!9.68e-11!70;CL:0000557!1.69e-10!71;CL:0000766!2.19e-09!76;CL:0002541!2.65e-07!3;CL:0000763!5.43e-07!112;CL:0000049!5.43e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0002541;1.10e-19;3!CL:0000349;3.12e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.39e-19,3;CL:0000349,3.15e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0009117;9.35e-07;10!UBERON:0005564;9.35e-07;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!2.97e-11!115;UBERON:0003124!9.73e-11!7;UBERON:0002371!1.67e-09!80;UBERON:0001474!2.77e-09!86;UBERON:0004765!3.30e-09!101;UBERON:0001434!3.30e-09!101;UBERON:0005631!1.39e-08!14;UBERON:0000158!1.39e-08!14;UBERON:0002390!3.91e-08!102;UBERON:0003061!3.91e-08!102;UBERON:0000062!6.31e-08!511;UBERON:0002193!1.57e-07!112;UBERON:0000926!1.65e-07!448;UBERON:0004120!1.65e-07!448;UBERON:0006603!1.65e-07!448;UBERON:0000480!2.11e-07!626;UBERON:0000476!2.65e-07!3;UBERON:0000920!2.65e-07!3;UBERON:0000467!6.82e-07!625 | |ontology_enrichment_uberon=UBERON:0002405!2.97e-11!115;UBERON:0003124!9.73e-11!7;UBERON:0002371!1.67e-09!80;UBERON:0001474!2.77e-09!86;UBERON:0004765!3.30e-09!101;UBERON:0001434!3.30e-09!101;UBERON:0005631!1.39e-08!14;UBERON:0000158!1.39e-08!14;UBERON:0002390!3.91e-08!102;UBERON:0003061!3.91e-08!102;UBERON:0000062!6.31e-08!511;UBERON:0002193!1.57e-07!112;UBERON:0000926!1.65e-07!448;UBERON:0004120!1.65e-07!448;UBERON:0006603!1.65e-07!448;UBERON:0000480!2.11e-07!626;UBERON:0000476!2.65e-07!3;UBERON:0000920!2.65e-07!3;UBERON:0000467!6.82e-07!625 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.10e-19;3!UBERON:0000920;1.10e-19;3!UBERON:0000473;3.09e-08;8!UBERON:0002107;2.62e-07;19!UBERON:0006925;2.62e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.39e-19,3;UBERON:0003124,1.31e-18,7;UBERON:0005631,1.28e-09,14;UBERON:0000158,1.28e-09,14;UBERON:0000473,3.04e-08,8;UBERON:0002107,2.59e-07,19;UBERON:0006925,2.59e-07,19;UBERON:0008836,2.59e-07,19 | |||
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| ||
|short_description=p@chr10:125804230..125804253,- | |short_description=p@chr10:125804230..125804253,- | ||
}} | }} |
Latest revision as of 11:18, 23 July 2015
Short description: | p@chr10:125804230..125804253, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:125804230..125804253, - |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.39e-19 | 3 |
extraembryonic cell | 3.15e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.39e-19 | 3 |
chorion | 1.31e-18 | 7 |
extraembryonic membrane | 1.28e-09 | 14 |
membranous layer | 1.28e-09 | 14 |
testis | 3.04e-08 | 8 |
liver | 2.59e-07 | 19 |
digestive gland | 2.59e-07 | 19 |
liver bud | 2.59e-07 | 19 |