FFCP PHASE1:Hg19::chr10:114133773..114133784,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51703 | |EntrezGene=51703 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16526 | |HGNC=16526 | ||
|TSSclassifier=strong | |||
|UniProt=Q9ULC5 | |UniProt=Q9ULC5 | ||
|association_with_transcript=0bp_to_ENST00000354655_5end | |association_with_transcript=0bp_to_ENST00000354655_5end | ||
|cluster_id=chr10:114133773..114133784,+ | |||
|coexpression_cluster_id=C25 | |coexpression_cluster_id=C25 | ||
|description=CAGE_peak_9_at_ACSL5_5end | |description=CAGE_peak_9_at_ACSL5_5end | ||
|id=chr10:114133773..114133784,+ | |id=chr10:114133773..114133784,+ | ||
|ontology_enrichment_celltype=CL:0000181!8.09e-14!12;CL:0000417!8.09e-14!12;CL:0000668!8.09e-14!12;CL:0000414!8.09e-14!12;CL:0000412!8.09e-14!12;CL:0000182!8.09e-14!12;CL:0002617!4.64e-10!2;CL:0000223!6.00e-09!59 | |ontology_enrichment_celltype=CL:0000181!8.09e-14!12;CL:0000417!8.09e-14!12;CL:0000668!8.09e-14!12;CL:0000414!8.09e-14!12;CL:0000412!8.09e-14!12;CL:0000182!8.09e-14!12;CL:0002617!4.64e-10!2;CL:0000223!6.00e-09!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.94e-10;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.98e-10,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3493!5.33e-10!2;DOID:4929!6.11e-10!2 | |ontology_enrichment_disease=DOID:3493!5.33e-10!2;DOID:4929!6.11e-10!2 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.45e-22!35;UBERON:0004921!9.75e-22!129;UBERON:0004185!9.75e-22!129;UBERON:0000160!3.32e-18!27;UBERON:0001007!4.82e-17!155;UBERON:0001555!4.82e-17!155;UBERON:0007026!4.82e-17!155;UBERON:0008835!9.90e-16!22;UBERON:0003894!9.90e-16!22;UBERON:0004119!4.09e-15!169;UBERON:0000925!4.09e-15!169;UBERON:0006595!4.09e-15!169;UBERON:0009854!5.62e-15!23;UBERON:0007499!1.19e-13!25;UBERON:0009497!1.19e-13!25;UBERON:0000015!1.19e-13!25;UBERON:0002423!1.19e-13!25;UBERON:0006235!1.19e-13!25;UBERON:0004161!1.19e-13!25;UBERON:0009856!4.61e-13!26;UBERON:0001041!1.57e-12!98;UBERON:0000077!5.80e-12!130;UBERON:0002107!1.81e-11!19;UBERON:0006925!1.81e-11!19;UBERON:0008836!1.81e-11!19;UBERON:0002108!6.91e-11!14;UBERON:0005057!2.21e-10!26;UBERON:0003929!5.55e-10!54;UBERON:0005911!1.75e-09!82;UBERON:0000481!2.45e-07!347;UBERON:0000949!5.69e-07!45;UBERON:0000059!6.40e-07!11;UBERON:0006947!7.14e-07!3;UBERON:0004054!7.14e-07!3;UBERON:0000466!9.56e-07!126 | |ontology_enrichment_uberon=UBERON:0005409!2.45e-22!35;UBERON:0004921!9.75e-22!129;UBERON:0004185!9.75e-22!129;UBERON:0000160!3.32e-18!27;UBERON:0001007!4.82e-17!155;UBERON:0001555!4.82e-17!155;UBERON:0007026!4.82e-17!155;UBERON:0008835!9.90e-16!22;UBERON:0003894!9.90e-16!22;UBERON:0004119!4.09e-15!169;UBERON:0000925!4.09e-15!169;UBERON:0006595!4.09e-15!169;UBERON:0009854!5.62e-15!23;UBERON:0007499!1.19e-13!25;UBERON:0009497!1.19e-13!25;UBERON:0000015!1.19e-13!25;UBERON:0002423!1.19e-13!25;UBERON:0006235!1.19e-13!25;UBERON:0004161!1.19e-13!25;UBERON:0009856!4.61e-13!26;UBERON:0001041!1.57e-12!98;UBERON:0000077!5.80e-12!130;UBERON:0002107!1.81e-11!19;UBERON:0006925!1.81e-11!19;UBERON:0008836!1.81e-11!19;UBERON:0002108!6.91e-11!14;UBERON:0005057!2.21e-10!26;UBERON:0003929!5.55e-10!54;UBERON:0005911!1.75e-09!82;UBERON:0000481!2.45e-07!347;UBERON:0000949!5.69e-07!45;UBERON:0000059!6.40e-07!11;UBERON:0006947!7.14e-07!3;UBERON:0004054!7.14e-07!3;UBERON:0000466!9.56e-07!126 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;7.66e-28;22!UBERON:0000160;1.82e-26;17!UBERON:0002108;5.34e-25;4!UBERON:0004921;5.21e-17;33!UBERON:0002107;2.34e-11;19!UBERON:0006925;2.34e-11;19!UBERON:0001007;8.79e-10;81!UBERON:0002423;1.09e-08;25!UBERON:0000922;1.73e-07;49!UBERON:0001555;1.88e-07;54!UBERON:0002365;2.82e-07;31!UBERON:0002330;2.82e-07;31!UBERON:0001155;7.75e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.82e-26,17;UBERON:0002108,5.34e-25,4;UBERON:0005409,1.44e-24,25;UBERON:0004921,2.57e-17,118;UBERON:0001007,7.63e-14,145;UBERON:0001555,7.63e-14,145;UBERON:0007026,7.63e-14,145;UBERON:0004119,2.05e-12,160;UBERON:0000925,2.05e-12,160;UBERON:0006595,2.05e-12,160;UBERON:0002107,2.38e-11,19;UBERON:0006925,2.38e-11,19;UBERON:0008836,2.38e-11,19;UBERON:0011216,6.77e-10,223;UBERON:0008835,7.74e-10,22;UBERON:0003894,7.74e-10,22;UBERON:0009854,2.02e-09,23;UBERON:0007499,1.10e-08,25;UBERON:0009497,1.10e-08,25;UBERON:0000015,1.10e-08,25;UBERON:0002423,1.10e-08,25;UBERON:0006235,1.10e-08,25;UBERON:0004161,1.10e-08,25;UBERON:0003929,1.83e-08,54;UBERON:0009856,2.33e-08,26;UBERON:0005911,2.75e-07,82;UBERON:0002365,4.82e-07,31;UBERON:0002330,4.82e-07,31;UBERON:0001155,7.64e-07,9 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,2.53510069643662,0,5.90789906681404,0,3.32068784066407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65890789101569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,3.98059040265026,10.9985426088053,0,0,0,0,0,0,0,0.586993856796269,0,0.394584402849391,15.7287930863263,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0.787831823072237,0.824158583811665,0.808842526250219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.54311924402056,0,0,0,0,0,0.533937062838473,1.25763444079733,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,21.1570570762903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392600934460972,0.365753774946808,0,0,0,0,0,0,0,0,0,0,40.439258848563,13.9878118722533,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,2.19100916473955,0,0,0,0,0,20.1030199395852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0.538951212639521,0,0.366724332548599,0,0,0,0 | |phase1_expression=0.181678379270557,0.642301571672949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,2.53510069643662,0,5.90789906681404,0,3.32068784066407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65890789101569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,3.98059040265026,10.9985426088053,0,0,0,0,0,0,0,0.586993856796269,0,0.394584402849391,15.7287930863263,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0.787831823072237,0.824158583811665,0.808842526250219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.54311924402056,0,0,0,0,0,0.533937062838473,1.25763444079733,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,21.1570570762903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392600934460972,0.365753774946808,0,0,0,0,0,0,0,0,0,0,40.439258848563,13.9878118722533,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,2.19100916473955,0,0,0,0,0,20.1030199395852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0.538951212639521,0,0.366724332548599,0,0,0,0 | ||
|short_description=p9@ACSL5 | |short_description=p9@ACSL5 | ||
}} | }} |
Latest revision as of 10:20, 16 September 2015
Short description: | p9@ACSL5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_ACSL5_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 0bp_to_ENST00000354655_5end |
EntrezGene: | ACSL5 |
HGNC: | 16526 |
UniProt: | Q9ULC5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.98e-10 | 12 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.82e-26 | 17 |
small intestine | 5.34e-25 | 4 |
gastrointestinal system | 1.44e-24 | 25 |
subdivision of digestive tract | 2.57e-17 | 118 |
digestive system | 7.63e-14 | 145 |
digestive tract | 7.63e-14 | 145 |
primitive gut | 7.63e-14 | 145 |
endoderm-derived structure | 2.05e-12 | 160 |
endoderm | 2.05e-12 | 160 |
presumptive endoderm | 2.05e-12 | 160 |
liver | 2.38e-11 | 19 |
digestive gland | 2.38e-11 | 19 |
liver bud | 2.38e-11 | 19 |
organ system subdivision | 6.77e-10 | 223 |
hepatic diverticulum | 7.74e-10 | 22 |
liver primordium | 7.74e-10 | 22 |
digestive tract diverticulum | 2.02e-09 | 23 |
epithelial sac | 1.10e-08 | 25 |
epithelium of foregut-midgut junction | 1.10e-08 | 25 |
anatomical boundary | 1.10e-08 | 25 |
hepatobiliary system | 1.10e-08 | 25 |
foregut-midgut junction | 1.10e-08 | 25 |
septum transversum | 1.10e-08 | 25 |
gut epithelium | 1.83e-08 | 54 |
sac | 2.33e-08 | 26 |
endo-epithelium | 2.75e-07 | 82 |
exocrine gland | 4.82e-07 | 31 |
exocrine system | 4.82e-07 | 31 |
colon | 7.64e-07 | 9 |