FFCP PHASE1:Hg19::chr10:101673730..101673781,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23268 | |EntrezGene=23268 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30373 | |HGNC=30373 | ||
|TSSclassifier=strong | |||
|UniProt=Q6XZF7 | |UniProt=Q6XZF7 | ||
|association_with_transcript=56bp_to_BC041628_5end | |association_with_transcript=56bp_to_BC041628_5end | ||
|cluster_id=chr10:101673730..101673781,- | |||
|coexpression_cluster_id=C49 | |coexpression_cluster_id=C49 | ||
|description=CAGE_peak_3_at_DNMBP_5end | |description=CAGE_peak_3_at_DNMBP_5end | ||
|id=chr10:101673730..101673781,- | |id=chr10:101673730..101673781,- | ||
|ontology_enrichment_celltype=CL:0002319!3.83e-15!25;CL:0000133!9.57e-15!59;CL:0000047!4.57e-14!8;CL:0002322!1.01e-12!5;CL:0000221!3.17e-11!71;CL:0000540!5.25e-10!6;CL:0000031!5.25e-10!6;CL:0000404!5.25e-10!6;CL:0005020!2.94e-09!6;CL:0002138!2.94e-09!6;CL:0005022!2.94e-09!6;CL:0000039!2.54e-08!7;CL:0000586!2.54e-08!7;CL:0000128!4.19e-08!7;CL:0000126!4.19e-08!7;CL:0000127!4.19e-08!7;CL:0002453!4.19e-08!7;CL:0002605!5.91e-08!3;CL:0000064!2.60e-07!3;CL:0005012!2.60e-07!3;CL:0000067!2.60e-07!3;CL:0002304!2.60e-07!3;CL:0002586!3.09e-07!3;CL:0002618!8.47e-07!3;CL:0000243!9.11e-07!15;CL:0000125!9.11e-07!15;CL:0000030!9.11e-07!15;CL:0000339!9.11e-07!15;CL:0000333!9.33e-07!41 | |ontology_enrichment_celltype=CL:0002319!3.83e-15!25;CL:0000133!9.57e-15!59;CL:0000047!4.57e-14!8;CL:0002322!1.01e-12!5;CL:0000221!3.17e-11!71;CL:0000540!5.25e-10!6;CL:0000031!5.25e-10!6;CL:0000404!5.25e-10!6;CL:0005020!2.94e-09!6;CL:0002138!2.94e-09!6;CL:0005022!2.94e-09!6;CL:0000039!2.54e-08!7;CL:0000586!2.54e-08!7;CL:0000128!4.19e-08!7;CL:0000126!4.19e-08!7;CL:0000127!4.19e-08!7;CL:0002453!4.19e-08!7;CL:0002605!5.91e-08!3;CL:0000064!2.60e-07!3;CL:0005012!2.60e-07!3;CL:0000067!2.60e-07!3;CL:0002304!2.60e-07!3;CL:0002586!3.09e-07!3;CL:0002618!8.47e-07!3;CL:0000243!9.11e-07!15;CL:0000125!9.11e-07!15;CL:0000030!9.11e-07!15;CL:0000339!9.11e-07!15;CL:0000333!9.33e-07!41 | ||
|ontology_enrichment_celltype_v019=CL:0002322;3.60e-38;5!CL:0002605;1.66e-22;3!CL:0000039;1.10e-17;7!CL:0000586;1.10e-17;7!CL:0002319;1.85e-16;25!CL:0000047;1.60e-15;2!CL:0002321;1.20e-12;15!CL:0000540;4.98e-12;6!CL:0000404;4.98e-12;6!CL:0000128;5.66e-10;7!CL:0000126;5.66e-10;7!CL:0000127;5.66e-10;7!CL:0000148;2.26e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.60e-38,5;CL:0000047,3.28e-23,8;CL:0002605,1.72e-22,3;CL:0000039,1.12e-17,7;CL:0000586,1.12e-17,7;CL:0002319,1.91e-16,25;CL:0000133,2.48e-15,59;CL:0000221,2.90e-12,72;CL:0000540,5.07e-12,6;CL:0000031,5.07e-12,6;CL:0000404,5.07e-12,6;CL:0000128,5.75e-10,7;CL:0000126,5.75e-10,7;CL:0000127,5.75e-10,7;CL:0002453,5.75e-10,7;CL:0000148,2.26e-07,10;CL:0000541,2.26e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.29e-19;10!UBERON:0005564;6.29e-19;10!CL:0000031;4.98e-12;6!CL:0000133;6.48e-11;59 | |||
|ontology_enrichment_disease=DOID:3095!4.65e-15!22;DOID:2994!4.65e-15!22;DOID:171!1.01e-07!10 | |ontology_enrichment_disease=DOID:3095!4.65e-15!22;DOID:2994!4.65e-15!22;DOID:171!1.01e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:3095;5.03e-26;22!DOID:2994;5.03e-26;22!DOID:171;5.34e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.81e-26,22;DOID:2994,4.81e-26,22;DOID:171,5.23e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.54e-38!94;UBERON:0001016!1.54e-38!94;UBERON:0005743!8.15e-36!86;UBERON:0001017!2.12e-30!82;UBERON:0003056!3.02e-29!61;UBERON:0002346!3.65e-27!90;UBERON:0001893!6.54e-25!34;UBERON:0000924!7.52e-24!173;UBERON:0006601!7.52e-24!173;UBERON:0003075!1.11e-23!86;UBERON:0007284!1.11e-23!86;UBERON:0002791!1.60e-23!33;UBERON:0001869!6.09e-22!32;UBERON:0000955!8.71e-22!69;UBERON:0006238!8.71e-22!69;UBERON:0002780!1.60e-21!41;UBERON:0001890!1.60e-21!41;UBERON:0006240!1.60e-21!41;UBERON:0004121!4.47e-21!169;UBERON:0003080!7.31e-21!42;UBERON:0002020!2.30e-20!34;UBERON:0003528!2.30e-20!34;UBERON:0001049!9.11e-20!57;UBERON:0005068!9.11e-20!57;UBERON:0006241!9.11e-20!57;UBERON:0007135!9.11e-20!57;UBERON:0002616!1.01e-18!59;UBERON:0000033!2.42e-17!123;UBERON:0000956!9.55e-17!25;UBERON:0000203!9.55e-17!25;UBERON:0000153!4.91e-16!129;UBERON:0007811!4.91e-16!129;UBERON:0001950!1.93e-13!20;UBERON:0002619!5.34e-12!22;UBERON:0007625!1.13e-11!11;UBERON:0000970!1.09e-10!20;UBERON:0000966!1.67e-10!5;UBERON:0005388!1.67e-10!5;UBERON:0001802!1.67e-10!5;UBERON:0002104!4.64e-10!21;UBERON:0000019!2.14e-09!19;UBERON:0000047!2.14e-09!19;UBERON:0004088!2.14e-09!19;UBERON:0003072!2.14e-09!19;UBERON:0003071!2.14e-09!19;UBERON:0004128!2.14e-09!19;UBERON:0000020!5.73e-09!23;UBERON:0001032!1.72e-08!24;UBERON:0004456!1.72e-08!24;UBERON:0001456!2.70e-08!21;UBERON:0001778!2.60e-07!3;UBERON:0001775!2.60e-07!3;UBERON:0001781!3.09e-07!3;UBERON:0001782!3.09e-07!3;UBERON:0005424!3.09e-07!3;UBERON:0001872!5.02e-07!5;UBERON:0001473!8.07e-07!8;UBERON:0004536!8.07e-07!8;UBERON:0006558!8.07e-07!8;UBERON:0009663!9.51e-07!7 | |ontology_enrichment_uberon=UBERON:0000073!1.54e-38!94;UBERON:0001016!1.54e-38!94;UBERON:0005743!8.15e-36!86;UBERON:0001017!2.12e-30!82;UBERON:0003056!3.02e-29!61;UBERON:0002346!3.65e-27!90;UBERON:0001893!6.54e-25!34;UBERON:0000924!7.52e-24!173;UBERON:0006601!7.52e-24!173;UBERON:0003075!1.11e-23!86;UBERON:0007284!1.11e-23!86;UBERON:0002791!1.60e-23!33;UBERON:0001869!6.09e-22!32;UBERON:0000955!8.71e-22!69;UBERON:0006238!8.71e-22!69;UBERON:0002780!1.60e-21!41;UBERON:0001890!1.60e-21!41;UBERON:0006240!1.60e-21!41;UBERON:0004121!4.47e-21!169;UBERON:0003080!7.31e-21!42;UBERON:0002020!2.30e-20!34;UBERON:0003528!2.30e-20!34;UBERON:0001049!9.11e-20!57;UBERON:0005068!9.11e-20!57;UBERON:0006241!9.11e-20!57;UBERON:0007135!9.11e-20!57;UBERON:0002616!1.01e-18!59;UBERON:0000033!2.42e-17!123;UBERON:0000956!9.55e-17!25;UBERON:0000203!9.55e-17!25;UBERON:0000153!4.91e-16!129;UBERON:0007811!4.91e-16!129;UBERON:0001950!1.93e-13!20;UBERON:0002619!5.34e-12!22;UBERON:0007625!1.13e-11!11;UBERON:0000970!1.09e-10!20;UBERON:0000966!1.67e-10!5;UBERON:0005388!1.67e-10!5;UBERON:0001802!1.67e-10!5;UBERON:0002104!4.64e-10!21;UBERON:0000019!2.14e-09!19;UBERON:0000047!2.14e-09!19;UBERON:0004088!2.14e-09!19;UBERON:0003072!2.14e-09!19;UBERON:0003071!2.14e-09!19;UBERON:0004128!2.14e-09!19;UBERON:0000020!5.73e-09!23;UBERON:0001032!1.72e-08!24;UBERON:0004456!1.72e-08!24;UBERON:0001456!2.70e-08!21;UBERON:0001778!2.60e-07!3;UBERON:0001775!2.60e-07!3;UBERON:0001781!3.09e-07!3;UBERON:0001782!3.09e-07!3;UBERON:0005424!3.09e-07!3;UBERON:0001872!5.02e-07!5;UBERON:0001473!8.07e-07!8;UBERON:0004536!8.07e-07!8;UBERON:0006558!8.07e-07!8;UBERON:0009663!9.51e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000922;3.32e-17;49!UBERON:0002346;1.02e-16;4!UBERON:0000923;1.02e-16;4!UBERON:0010316;1.02e-16;4!UBERON:0005291;1.02e-16;4!UBERON:0000473;1.68e-15;8!UBERON:0002050;1.71e-13;5!UBERON:0005423;1.71e-13;5!UBERON:0003135;2.55e-11;11!UBERON:0000991;6.43e-09;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.71e-15,8;UBERON:0003135,2.58e-11,11;UBERON:0000991,6.38e-09,21;UBERON:0009196,6.38e-09,21;UBERON:0009117,6.38e-09,21;UBERON:0005564,6.38e-09,21;UBERON:0004176,1.66e-08,22;UBERON:0001017,3.35e-07,81 | |||
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| ||
|short_description=p3@DNMBP | |short_description=p3@DNMBP | ||
}} | }} |
Latest revision as of 19:23, 15 September 2015
Short description: | p3@DNMBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DNMBP_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | 56bp_to_BC041628_5end |
EntrezGene: | DNMBP |
HGNC: | 30373 |
UniProt: | Q6XZF7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.60e-38 | 5 |
neuronal stem cell | 3.28e-23 | 8 |
astrocyte of the cerebral cortex | 1.72e-22 | 3 |
germ line cell | 1.12e-17 | 7 |
germ cell | 1.12e-17 | 7 |
neural cell | 1.91e-16 | 25 |
neurectodermal cell | 2.48e-15 | 59 |
ectodermal cell | 2.90e-12 | 72 |
neuron | 5.07e-12 | 6 |
neuroblast | 5.07e-12 | 6 |
electrically signaling cell | 5.07e-12 | 6 |
oligodendrocyte | 5.75e-10 | 7 |
macroglial cell | 5.75e-10 | 7 |
astrocyte | 5.75e-10 | 7 |
oligodendrocyte precursor cell | 5.75e-10 | 7 |
melanocyte | 2.26e-07 | 10 |
melanoblast | 2.26e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
testis | 1.71e-15 | 8 |
male reproductive organ | 2.58e-11 | 11 |
gonad | 6.38e-09 | 21 |
indifferent external genitalia | 6.38e-09 | 21 |
indifferent gonad | 6.38e-09 | 21 |
gonad primordium | 6.38e-09 | 21 |
external genitalia | 1.66e-08 | 22 |
central nervous system | 3.35e-07 | 81 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.81e-26 | 22 |
germ cell cancer | 4.81e-26 | 22 |
neuroectodermal tumor | 5.23e-07 | 10 |