FFCP PHASE1:Hg19::chr17:75315624..75315648,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:75315624..75315648,+
|short_description=p11@SEPT9
|description=CAGE_peak_11_at_SEPT9_5end
|association_with_transcript=27bp_to_ENST00000329047,NM_006640,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10801 | |EntrezGene=10801 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7323 | |HGNC=7323 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UHD8 | |UniProt=Q9UHD8 | ||
|association_with_transcript=27bp_to_ENST00000329047,NM_006640,uc002jtu.3_5end | |||
|cluster_id=chr17:75315624..75315648,+ | |||
|coexpression_cluster_id=C3686 | |||
|description=CAGE_peak_11_at_SEPT9_5end | |||
|id=chr17:75315624..75315648,+ | |||
|ontology_enrichment_celltype=CL:0000048!4.23e-24!430;CL:0000723!1.47e-22!436;CL:0002320!1.11e-21!365;CL:0000134!6.06e-21!358;CL:0000034!1.27e-20!444;CL:0000219!4.50e-19!390;CL:0000055!1.93e-16!180;CL:0000057!3.08e-15!75;CL:0000557!2.78e-14!71;CL:0002371!6.30e-14!591;CL:0002009!8.89e-14!65;CL:0002194!4.05e-13!63;CL:0000576!4.05e-13!63;CL:0000040!4.05e-13!63;CL:0000559!4.05e-13!63;CL:0000839!3.15e-12!70;CL:0002620!4.18e-11!23;CL:0000763!3.72e-10!112;CL:0000049!3.72e-10!112;CL:0000766!5.11e-10!76;CL:0000144!6.57e-10!625;CL:0002057!2.44e-09!42;CL:0000860!1.49e-08!45;CL:0000548!2.18e-08!679;CL:0000004!2.18e-08!679;CL:0000255!2.18e-08!679;CL:0000012!3.61e-08!682 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.30e-13;33!CL:0002057;1.30e-13;33!CL:0000473;2.19e-13;39!CL:0000234;2.19e-13;39!CL:0002620;7.74e-12;23!CL:0000576;3.61e-08;48!CL:0000057;1.51e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.35e-28,427;CL:0000723,9.81e-27,433;CL:0002320,1.51e-26,361;CL:0000134,5.77e-26,354;CL:0000034,8.25e-25,441;CL:0000219,3.02e-24,386;CL:0000557,9.12e-17,67;CL:0002009,1.58e-16,61;CL:0002194,8.82e-16,59;CL:0000576,8.82e-16,59;CL:0000040,8.82e-16,59;CL:0000559,8.82e-16,59;CL:0000057,8.89e-16,76;CL:0000839,1.04e-14,66;CL:0000473,5.09e-13,48;CL:0000234,5.09e-13,48;CL:0002620,4.72e-12,23;CL:0000766,4.95e-12,72;CL:0000763,8.55e-12,108;CL:0000049,8.55e-12,108;CL:0000860,1.02e-10,42;CL:0002057,1.02e-10,42 | |||
|ontology_enrichment_development_v019=CL:0002057;1.21e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.92e-23!375;UBERON:0002204!5.76e-19!167;UBERON:0001474!5.37e-16!86;UBERON:0002371!6.07e-16!80;UBERON:0004765!3.42e-15!101;UBERON:0001434!3.42e-15!101;UBERON:0000926!9.33e-12!448;UBERON:0004120!9.33e-12!448;UBERON:0006603!9.33e-12!448;UBERON:0003081!2.19e-10!216;UBERON:0000479!3.76e-09!787;UBERON:0002199!9.19e-09!45;UBERON:0002416!9.19e-09!45;UBERON:0002405!1.01e-08!115;UBERON:0002390!3.09e-08!102;UBERON:0003061!3.09e-08!102;UBERON:0002097!5.31e-08!40;UBERON:0003102!6.11e-08!95;UBERON:0000062!6.20e-08!511;UBERON:0002193!2.14e-07!112;UBERON:0000914!2.98e-07!83;UBERON:0002329!2.98e-07!83;UBERON:0003077!2.98e-07!83;UBERON:0003059!2.98e-07!83;UBERON:0007282!2.98e-07!83;UBERON:0009618!2.98e-07!83;UBERON:0007285!2.98e-07!83;UBERON:0004290!3.71e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;8.32e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.68e-28,371;UBERON:0002371,1.25e-18,76;UBERON:0001474,1.76e-18,82;UBERON:0002204,1.80e-18,167;UBERON:0001434,2.12e-16,100;UBERON:0004765,3.22e-16,90;UBERON:0000926,1.53e-13,315;UBERON:0004120,1.53e-13,315;UBERON:0006603,1.53e-13,315;UBERON:0002405,4.78e-13,93;UBERON:0003081,1.88e-12,203;UBERON:0002390,8.28e-10,98;UBERON:0003061,8.28e-10,98;UBERON:0002199,1.53e-09,46;UBERON:0002416,1.53e-09,46;UBERON:0002097,1.54e-08,41;UBERON:0002193,2.77e-08,108;UBERON:0007503,7.35e-07,78 | |||
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| ||
|short_description=p11@SEPT9 | |||
}} | }} |
Latest revision as of 18:17, 17 September 2015
Short description: | p11@SEPT9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SEPT9_5end |
Coexpression cluster: | C3686_CD14_Mesenchymal_liposarcoma_renal_amniotic_anaplastic_immature |
Association with transcript: | 27bp_to_ENST00000329047, NM_006640, uc002jtu.3_5end |
EntrezGene: | SEPT9 |
HGNC: | 7323 |
UniProt: | Q9UHD8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.35e-28 | 427 |
somatic stem cell | 9.81e-27 | 433 |
connective tissue cell | 1.51e-26 | 361 |
mesenchymal cell | 5.77e-26 | 354 |
stem cell | 8.25e-25 | 441 |
motile cell | 3.02e-24 | 386 |
granulocyte monocyte progenitor cell | 9.12e-17 | 67 |
macrophage dendritic cell progenitor | 1.58e-16 | 61 |
monopoietic cell | 8.82e-16 | 59 |
monocyte | 8.82e-16 | 59 |
monoblast | 8.82e-16 | 59 |
promonocyte | 8.82e-16 | 59 |
fibroblast | 8.89e-16 | 76 |
myeloid lineage restricted progenitor cell | 1.04e-14 | 66 |
defensive cell | 5.09e-13 | 48 |
phagocyte | 5.09e-13 | 48 |
skin fibroblast | 4.72e-12 | 23 |
myeloid leukocyte | 4.95e-12 | 72 |
myeloid cell | 8.55e-12 | 108 |
common myeloid progenitor | 8.55e-12 | 108 |
classical monocyte | 1.02e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.02e-10 | 42 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.68e-28 | 371 |
bone marrow | 1.25e-18 | 76 |
bone element | 1.76e-18 | 82 |
musculoskeletal system | 1.80e-18 | 167 |
skeletal system | 2.12e-16 | 100 |
skeletal element | 3.22e-16 | 90 |
mesoderm | 1.53e-13 | 315 |
mesoderm-derived structure | 1.53e-13 | 315 |
presumptive mesoderm | 1.53e-13 | 315 |
immune system | 4.78e-13 | 93 |
lateral plate mesoderm | 1.88e-12 | 203 |
hematopoietic system | 8.28e-10 | 98 |
blood island | 8.28e-10 | 98 |
integument | 1.53e-09 | 46 |
integumental system | 1.53e-09 | 46 |
skin of body | 1.54e-08 | 41 |
hemolymphoid system | 2.77e-08 | 108 |
epithelial vesicle | 7.35e-07 | 78 |