FFCP PHASE1:Hg19::chr17:74581856..74581872,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:74581856..74581872,-
|short_description=p3@ST6GALNAC2
|description=CAGE_peak_3_at_ST6GALNAC2_5end
|association_with_transcript=17bp_to_BT019972_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10610 | |EntrezGene=10610 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10867 | |HGNC=10867 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UJ37 | |UniProt=Q9UJ37 | ||
|association_with_transcript=17bp_to_BT019972_5end | |||
|cluster_id=chr17:74581856..74581872,- | |||
|description=CAGE_peak_3_at_ST6GALNAC2_5end | |||
|id=chr17:74581856..74581872,- | |||
|ontology_enrichment_celltype=CL:0002076!2.13e-12!43;CL:0002368!3.35e-09!13;CL:0002057!4.27e-09!42;CL:0002077!1.77e-08!33;CL:0000223!1.85e-08!59;CL:0000860!5.95e-08!45;CL:0002159!5.55e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;4.28e-19;42!CL:0002368;3.33e-17;13!CL:0002077;2.38e-15;34!CL:0002159;1.51e-11;14!CL:0000148;4.96e-11;10!CL:0002251;4.03e-10;20!CL:0002327;7.00e-10;4!CL:0000244;1.69e-09;4!CL:0000731;1.69e-09;4!CL:0002202;3.80e-09;9!CL:0002632;3.80e-09;9!CL:0002621;2.74e-08;3!CL:0000710;3.56e-08;20!CL:0002567;4.48e-08;3!CL:0002328;5.61e-08;3!CL:0000307;7.79e-08;3!CL:0000147;1.54e-07;14!CL:0002166;9.31e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.93e-24,42;CL:0000066,3.84e-20,253;CL:0002077,1.10e-17,34;CL:0002368,2.69e-17,13;CL:0000223,3.12e-17,58;CL:0002159,1.25e-11,14;CL:0000148,5.30e-11,10;CL:0000541,5.30e-11,10;CL:0002251,4.42e-10,20;CL:0002327,7.62e-10,4;CL:0000244,1.48e-09,4;CL:0000731,1.48e-09,4;CL:0002202,3.28e-09,9;CL:0002632,3.28e-09,9;CL:0002621,2.99e-08,3;CL:0002567,3.71e-08,3;CL:0000710,4.01e-08,20;CL:0002328,4.94e-08,3;CL:0000068,7.03e-08,3;CL:0000069,7.03e-08,3;CL:0000307,7.03e-08,3;CL:0000377,7.03e-08,3;CL:0000147,1.61e-07,14;CL:0002166,6.98e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;6.91e-10;58!CL:0000377;7.79e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;2.30e-10;4!DOID:1612;2.30e-10;4!DOID:1749;1.01e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.79e-10,4;DOID:1612,2.79e-10,4;DOID:1749,1.05e-09,14 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;7.00e-10;4!UBERON:0000486;6.95e-09;12!UBERON:0003729;1.72e-08;13!UBERON:0001949;2.74e-08;3!UBERON:0004815;5.61e-08;3!UBERON:0002031;5.61e-08;3!UBERON:0000365;1.37e-07;5!UBERON:0001723;3.13e-07;3!UBERON:0001033;3.13e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,7.62e-10,4;UBERON:0005333,7.62e-10,4;UBERON:0008425,7.62e-10,4;UBERON:0005311,7.62e-10,4;UBERON:0003729,1.93e-08,13;UBERON:0001949,2.99e-08,3;UBERON:0004815,4.94e-08,3;UBERON:0002031,4.94e-08,3;UBERON:0000365,1.23e-07,5;UBERON:0003102,3.70e-07,99;UBERON:0001723,4.14e-07,3;UBERON:0001033,4.14e-07,3;UBERON:0010056,4.14e-07,3;UBERON:0000166,6.70e-07,22;UBERON:0001004,9.02e-07,74 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0.436882744260345,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0.0787107813136792,0,0.383829398097213,0.309632246632152,2.75826367343678,3.31326510656075,7.76483421350254,0,0,0,1.66198622559563,2.60707781711184,1.51907609501096,0,0,0,0.145398238779565,0,0,0,0.822335776043652,0.619412741790207,0,0.768482119587302,0.47296445977717,0,0,0,0.188242339542605,0,0.674170453335254,0.306083892370903,0.641858054152187,3.19668562899521,0.329851300186716,0,0.852449501065388,0.290209238628584,0,0,0.502497330513487,1.0429658368404,0.65156653411535,0,0.368277635987565,0,0.633765858935825,1.70083439972035,0.209658645508376,0.561643155732475,0.300353785683013,0.64290234678832,1.42506371870624,0.79566670879636,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0.560508562981536,0,0,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0.267440195783507,0.579297615531196,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.196468613246569,3.27865759463288,8.89882662682631,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,10.9023513035634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0.18611685633159,0,0,0,0,0,0,0,0,5.60456474173561,5.45492241181669,3.15485054927904,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,3.18275827685014,4.49607013030478,1.80952150340936,3.24059558054854,0,0,0,0.115930404975077,0,0,0,0,15.0138835612262,14.5942647556128,0,0,0,1.87467667973554,1.84780341018745,1.13420077793909,6.98556477082217,2.90633938513962,3.06706143332169,0,0,0.414656231081544,0.576479813667846,0.25248486685276,2.41291998310242,3.81988425558278,5.86087236050235,3.4214489204541,1.23392991243988,8.10926256178577,5.43070221998099,0,0,0,0,0,0,0,0,0,1.41849132023278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0,0,0.749007023947182,0,4.97298616123243,0,0,0,0,0.356857977594324,0,0,0,0,0,0,0,0,0,1.37257369524342,0.620304078368662,0.647142602455851,0.853820462427555,0,0,0,0,0,0,0.256278298511402,0,0.160853921143607,0,0,0,0,0,0,0,5.01266175758212,1.65745780084613,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,2.29706215198469,0.650060246036521,0,0,0,0,0,0,0,0,0,7.10725136052206,4.80475168412765,4.21121951232128,5.96830907047745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,2.79044126903985,4.69211592875051,3.26672954583968,0.0941438007767792,1.72202149068492,11.7930032967338,3.10401107475673,1.60806380144872,0,0.764637207142375,1.13929437434833,0.238231775457789,0,0,0.540031437238115,0,0.427296284509893,2.88743956579008,2.20536194382929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,1.12284324244932,0,0,0,0,0.23874448473769,0,0.614321404198464,0,0,0,0,0,0,0.276283915531148,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,2.3438498497671,2.36141999989728,0,3.98277068999249,0.254253650292766,0,0,0,0,0,0.120596438625408,0,0,0,0,0,5.43752602686553,0.230850775511391,0,0,0,0.760531603454056,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,1.36965233252463,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0.867798691675654,4.70363507589013,0.174118413160805,0.52418000472609,0,0,0,0,0.969890164884194,0,0.677942222341597,0,0,0,1.17330829640882,0,0,0,0.144090417154106,0,0,0,0,12.727477869307,0,0,0,0,0,0,0,0,0,0,0,0,0.998395002494955,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0.674921674654501,3.86900977278975,0,11.404779378375,0.236417121897595,0.209818352539992,0,0,0.191915197319445,0,0,0.25426853765475,0,0,0,0,0,0,1.35974509824151,0,0,0.129282956361551,0.13223260174269,0,0,0.106787412567695,0.78602152549833,0.414239055347196,0,0,0,4.46838880439127,0,0.5013797880454,0.306345576763462,0,0,0,0,0,4.0138643698305,0.221858103073705,0.18628920882415,0,0.249960815924213,4.85277176133273,0.856396000634902,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265729680626726,0,0,0,0,0.39997479170986,0.106691729694141,0,0,0,2.09819261579167,8.08700438042865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55184068102667,0,12.4731446994742,4.15892398141218,0,0,0,0.0752103283492573,0,0,0.523813388962845,0,0.443568258651136,0,0,0,0,0,0,0.496211178389294,0,1.91643641459393,0.535701835878287,0,0,0,0.532214220975833,0,0,0.135939465953663,0,0,0,0.313972371402056,0,0,0.913158720509496,0,0,2.71610867871294,0.158013611732727,0,0,0,0.207216164163037,1.0243108625637,0,0.430227358820278,0,0.0852134047591577,0.423387050190929,1.8328549483524,0,0,0,0.196300467230486,1.82876887473404,0,0.205325613712494,0,2.914265958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| ||
|short_description=p3@ST6GALNAC2 | |||
}} | }} |
Latest revision as of 16:02, 17 September 2015
Short description: | p3@ST6GALNAC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ST6GALNAC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 17bp_to_BT019972_5end |
EntrezGene: | ST6GALNAC2 |
HGNC: | 10867 |
UniProt: | Q9UJ37 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.93e-24 | 42 |
epithelial cell | 3.84e-20 | 253 |
ecto-epithelial cell | 1.10e-17 | 34 |
respiratory epithelial cell | 2.69e-17 | 13 |
endodermal cell | 3.12e-17 | 58 |
general ecto-epithelial cell | 1.25e-11 | 14 |
melanocyte | 5.30e-11 | 10 |
melanoblast | 5.30e-11 | 10 |
epithelial cell of alimentary canal | 4.42e-10 | 20 |
mammary gland epithelial cell | 7.62e-10 | 4 |
transitional epithelial cell | 1.48e-09 | 4 |
urothelial cell | 1.48e-09 | 4 |
epithelial cell of tracheobronchial tree | 3.28e-09 | 9 |
epithelial cell of lower respiratory tract | 3.28e-09 | 9 |
gingival epithelial cell | 2.99e-08 | 3 |
light melanocyte | 3.71e-08 | 3 |
neurecto-epithelial cell | 4.01e-08 | 20 |
bronchial epithelial cell | 4.94e-08 | 3 |
duct epithelial cell | 7.03e-08 | 3 |
branched duct epithelial cell | 7.03e-08 | 3 |
tracheal epithelial cell | 7.03e-08 | 3 |
tracheoblast | 7.03e-08 | 3 |
pigment cell | 1.61e-07 | 14 |
epithelial cell of Malassez | 6.98e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 7.62e-10 | 4 |
mammary bud | 7.62e-10 | 4 |
mammary ridge | 7.62e-10 | 4 |
mammary placode | 7.62e-10 | 4 |
mouth mucosa | 1.93e-08 | 13 |
gingival epithelium | 2.99e-08 | 3 |
lower respiratory tract epithelium | 4.94e-08 | 3 |
epithelium of bronchus | 4.94e-08 | 3 |
urothelium | 1.23e-07 | 5 |
surface structure | 3.70e-07 | 99 |
tongue | 4.14e-07 | 3 |
gustatory system | 4.14e-07 | 3 |
future tongue | 4.14e-07 | 3 |
oral opening | 6.70e-07 | 22 |
respiratory system | 9.02e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.79e-10 | 4 |
breast cancer | 2.79e-10 | 4 |
squamous cell carcinoma | 1.05e-09 | 14 |