FFCP PHASE1:Hg19::chr17:74128855..74128892,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:74128855..74128892,+
|short_description=p@chr17:74128855..74128892,+
|description=CAGE_peak_at_chr17:74128855..74128892,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:74128855..74128892,+ | |||
|description=CAGE_peak_at_chr17:74128855..74128892,+ | |||
|id=chr17:74128855..74128892,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.92e-12!5;CL:0000066!2.51e-12!254;CL:0002076!8.66e-10!43;CL:0000223!2.31e-09!59 | |||
|ontology_enrichment_celltype_v019=CL:0000313;1.61e-13;1!CL:0002149;1.12e-08;6!CL:0002255;1.12e-08;6!CL:0000159;2.15e-07;2!CL:1000415;2.28e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,1.61e-13,1;CL:0002149,1.04e-08,6;CL:0002255,1.04e-08,6;CL:0000159,2.15e-07,2;CL:1000415,2.28e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.36e-26!106;DOID:0050687!1.31e-20!143;DOID:1749!1.31e-19!14;DOID:299!1.55e-12!25;DOID:162!1.83e-10!235;DOID:14566!5.09e-10!239 | |||
|ontology_enrichment_disease_v019=DOID:2152;1.61e-13;1!DOID:178;6.05e-13;1!DOID:326;6.05e-13;1!DOID:3978;6.05e-13;1!DOID:3394;6.05e-13;1!DOID:5844;6.05e-13;1!DOID:299;1.20e-11;25!DOID:3001;1.12e-08;6!DOID:3119;4.94e-08;14!DOID:1749;4.94e-08;14!DOID:4074;2.66e-07;2!DOID:4905;2.66e-07;2!DOID:3498;2.66e-07;2!DOID:120;3.46e-07;27!DOID:114;4.17e-07;2!DOID:4929;4.17e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.77e-17,106;DOID:2152,1.61e-13,1;DOID:178,4.23e-13,1;DOID:326,4.23e-13,1;DOID:3978,4.23e-13,1;DOID:3394,4.23e-13,1;DOID:5844,4.23e-13,1;DOID:0050687,3.99e-12,143;DOID:299,1.32e-11,25;DOID:3001,1.04e-08,6;DOID:1749,5.06e-08,14;DOID:3119,5.71e-08,14;DOID:162,7.16e-08,235;DOID:14566,1.15e-07,239;DOID:4074,2.74e-07,2;DOID:4905,2.74e-07,2;DOID:3498,2.74e-07,2;DOID:120,3.08e-07,27;DOID:114,3.48e-07,2;DOID:4929,4.42e-07,2;DOID:193,9.50e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0005156!6.73e-11!59;UBERON:0000990!6.73e-11!59;UBERON:0003133!5.45e-10!48;UBERON:0000466!1.85e-07!126;UBERON:0000002!3.00e-07!6;UBERON:0001560!3.00e-07!6;UBERON:0000344!3.11e-07!12;UBERON:0004175!5.52e-07!25;UBERON:0000464!5.55e-07!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;1.61e-13;1!UBERON:0001000;6.05e-13;1!UBERON:0004913;6.05e-13;1!UBERON:0003703;6.05e-13;1!UBERON:0005352;6.05e-13;1!UBERON:0001174;6.05e-13;1!UBERON:0004914;6.05e-13;1!UBERON:0004175;4.37e-09;21!UBERON:0002294;1.06e-07;7!UBERON:0001173;1.06e-07;7!UBERON:0003133;1.08e-07;44!UBERON:0004909;2.15e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,1.61e-13,1;UBERON:0004913,6.82e-13,1;UBERON:0003703,6.82e-13,1;UBERON:0001174,6.82e-13,1;UBERON:0004914,6.82e-13,1;UBERON:0001000,8.64e-13,1;UBERON:0005352,8.64e-13,1;UBERON:0003133,1.75e-08,48;UBERON:0004175,1.08e-07,25;UBERON:0004909,2.15e-07,2;UBERON:0005156,7.94e-07,59;UBERON:0000990,7.94e-07,59 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0.265059536642971,0.348581828608555,0.414644220061482,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737930631258681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0.460404944679482,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,1.68900326502395,0,0,0,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.1137934482855,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0.975966209950223,0.153900517007594,0,0.46112780877612,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0,0.652931232636591,0.424059214301822,0,0,0,0,0,0,0,0,0,0,0,2.34797542718508,0,1.18375320854817,0,0,0,0.150323419414493,0,0,0,0,0,0.284609546029793,0,1.21491816834592,0.195984794828755,0.435296032902013,0,0,0,0,0,0,0,0.225980740780532,0,0,0,3.32437350649165,0.160317640503067,0,0,1.00863292007874,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,1.79711100449092,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0,0,0,0,0,0,0.825236619583403,2.07720169014593,0,0,0,0,0,0.681909645754975,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0.471612915298998,0,0,0,0,0,0,0,0,0,0.942324577501406,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845248493434508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07962490351128,0.11796972334774,0,0.346576998451015,0,0,0,0.150420656698515,0,0,0,0,1.33070477595341,0,0,0,0,0,0,0,0,0.638812138197976,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,1.8328549483524,0,0,7.15874763505871,0.098150233615243,0.243835849964539,0,0,0,0,1.87151570769685,1.39265542612958,0,0.67767649223376,0,2.71733118420012,0,0,0.470317296361523,0,0.942706188406504,0,0,0,0,0,0,0,1.78553938605658,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509944148709909,0,2.6649520865105,0,0.0757786982182394,0,0,0,0,0.476128862927481,0,0.0620747142958579,0,0,0.202117188958219,0.217716747896961,0,0,0.143444410785353,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr17:74128855..74128892,+ | |||
}} | }} |
Latest revision as of 21:20, 25 July 2015
Short description: | p@chr17:74128855..74128892, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:74128855..74128892, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 1.61e-13 | 1 |
epithelial cell of uterus | 1.04e-08 | 6 |
stromal cell of endometrium | 1.04e-08 | 6 |
seromucus secreting cell | 2.15e-07 | 2 |
epithelial cell of gall bladder | 2.28e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 1.61e-13 | 1 |
hepatopancreatic ampulla | 6.82e-13 | 1 |
extrahepatic bile duct | 6.82e-13 | 1 |
common bile duct | 6.82e-13 | 1 |
duodenal papilla | 6.82e-13 | 1 |
vas deferens | 8.64e-13 | 1 |
spermatic cord | 8.64e-13 | 1 |
reproductive organ | 1.75e-08 | 48 |
internal genitalia | 1.08e-07 | 25 |
epithelium of gonad | 2.15e-07 | 2 |
reproductive structure | 7.94e-07 | 59 |
reproductive system | 7.94e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.77e-17 | 106 |
ovary epithelial cancer | 1.61e-13 | 1 |
vascular disease | 4.23e-13 | 1 |
ischemia | 4.23e-13 | 1 |
extrinsic cardiomyopathy | 4.23e-13 | 1 |
myocardial ischemia | 4.23e-13 | 1 |
myocardial infarction | 4.23e-13 | 1 |
cell type cancer | 3.99e-12 | 143 |
adenocarcinoma | 1.32e-11 | 25 |
female reproductive endometrioid cancer | 1.04e-08 | 6 |
squamous cell carcinoma | 5.06e-08 | 14 |
gastrointestinal system cancer | 5.71e-08 | 14 |
cancer | 7.16e-08 | 235 |
disease of cellular proliferation | 1.15e-07 | 239 |
pancreas adenocarcinoma | 2.74e-07 | 2 |
pancreatic carcinoma | 2.74e-07 | 2 |
pancreatic ductal adenocarcinoma | 2.74e-07 | 2 |
female reproductive organ cancer | 3.08e-07 | 27 |
heart disease | 3.48e-07 | 2 |
tubular adenocarcinoma | 4.42e-07 | 2 |
reproductive organ cancer | 9.50e-07 | 29 |