FF:662-22H3: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00004789 | ||
|accession_numbers=CAGE;DRX009079;DRR009953;DRZ001378;DRZ002761;DRZ012728;DRZ014111 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000014,UBERON:0001003,UBERON:0002097,UBERON:0002199,UBERON:0007029,UBERON:0000483,UBERON:0000479,UBERON:0004121,UBERON:0000064,UBERON:0000062,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000119,UBERON:0003102,UBERON:0007376,UBERON:0010371,UBERON:0010317,UBERON:0002416 | |||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000101,FF:0000103,FF:0000001,FF:0000004,FF:0000303,FF:0000311,FF:0011400 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr11:94981424..94981439,+!p1@Dlx3!2.18!170.99!Dlx3;;chr16:25801993..25802014,+!p1@Trp63!2.14!138.36!Trp63;;chr11:121380640..121380655,-!p1@Zfp750!2.01!165.14!Zfp750;;chr2:9800207..9800234,-!p1@Gata3!1.82!189.08!Gata3;;chr13:53568104..53568156,-!p1@Msx2!1.79!88.00!Msx2;;chr15:102751603..102751630,+!p1@Hoxc13!1.76!56.81!Hoxc13;;chr9:31720843..31720888,-!p1@Barx2!1.74!59.47!Barx2;;chr13:72766250..72766273,+!p1@Irx2!1.72!77.32!Irx2;;chr11:121380594..121380609,-!p2@Zfp750!1.71!84.98!Zfp750;;chr13:40829137..40829205,-!p1@Tfap2a!1.71!56.33!Tfap2a;;chr13:72766279..72766296,+!p2@Irx2!1.59!55.79!Irx2;;chr4:135129538..135129558,-!p1@Grhl3!1.58!54.58!Grhl3;;chr9:43013917..43013968,-!p1@Pou2f3!1.58!37.27!Pou2f3;;chr11:121380611..121380625,-!p3@Zfp750!1.55!41.25!Zfp750;;chr5:77543897..77543911,-!p2@Hopx!1.54!63.51!Hopx;;chr19:5560600..5560617,-!p1@Ovol1!1.50!37.21!Ovol1;;chr4:46356509..46356527,+!p1@Foxe1!1.46!27.99!Foxe1;;chr14:118636214..118636235,-!p1@Sox21!1.44!31.85!Sox21;;chr12:34642510..34642530,+!p1@Twist1!1.43!80.52!Twist1;;chr3:99057269..99057306,+!p1@Tbx15!1.43!31.00!Tbx15;;chr11:96880072..96880079,+!p1@Sp6!1.41!24.49!Sp6;;chr2:38206580..38206600,+!p2@Lhx2!1.40!29.49!Lhx2;;chr12:25257141..25257173,+!p1@Grhl1!1.39!47.65!Grhl1;;chr2:172375081..172375105,+!p1@Tfap2c!1.37!22.32!Tfap2c;;chr2:38206744..38206766,+!p1@Lhx2!1.34!25.21!Lhx2;;chr6:70906450..70906454,+!p1@Foxi3!1.30!19.00!Foxi3;;chr15:97738692..97738747,-!p1@Vdr!1.25!90.11!Vdr;;chr11:78200071..78200100,-!p1@Foxn1!1.25!16.71!Foxn1;;chr19:5560570..5560582,-!p2@Ovol1!1.24!16.53!Ovol1;;chr13:40826961..40827001,-!p4@Tfap2a!1.22!15.62!Tfap2a;;chr4:55545337..55545357,-!p1@Klf4!1.21!218.57!Klf4;;chr7:19946556..19946611,+!p1@Ppp1r13l!1.20!58.38!Ppp1r13l;;chr12:25257265..25257294,+!p2@Grhl1!1.19!14.48!Grhl1;;chr13:83643159..83643226,+!p3@Mef2c!1.18!13.99!Mef2c;;chr4:124334894..124334899,+!p1@Pou3f1!1.16!17.31!Pou3f1;;chr7:6649134..6649167,-!p1@Zim1!1.15!70.20!Zim1;;chr14:70477113..70477173,+!p1@Egr3!1.15!12.97!Egr3;;chr4:148178559..148178603,+!p1@Casz1!1.14!36.61!Casz1;;chr15:35225845..35225867,+!p1@Osr2!1.14!32.57!Osr2;;chr10:44178521..44178557,-!p1@Prdm1!1.13!22.01!Prdm1;;chr15:102087880..102087927,-!p2@Rarg!1.12!27.99!Rarg;;chr13:72101178..72101203,-!p1@Irx1!1.12!19.06!Irx1;;chr15:102828658..102828678,+!p1@Hoxc6!1.12!12.18!Hoxc6;;chr12:109242266..109242295,-!p1@Bcl11b!1.11!98.55!Bcl11b;;chr16:18587076..18587106,-!p1@Tbx1!1.11!16.83!Tbx1;;chr2:71384802..71384815,-!p1@Dlx2!1.11!14.84!Dlx2;;chr12:37835141..37835194,+!p1@Meox2!1.10!36.19!Meox2;;chr18:80909801..80909819,-!p1@Nfatc1!1.09!67.13!Nfatc1;;chr12:25257176..25257190,+!p3@Grhl1!1.09!12.67!Grhl1;;chr15:102751578..102751600,+!p2@Hoxc13!1.09!11.40!Hoxc13;;chr13:73397958..73397994,+!p1@Irx4!1.09!11.34!Irx4;;chr10:126778916..126778974,-!p1@Gli1!1.08!24.79!Gli1;;chr1:93698030..93698064,+!p1@Twist2!1.07!21.59!Twist2;;chr6:115372058..115372085,+!p3@Pparg!1.05!10.19!Pparg;;chr6:52176164..52176195,-!p1@Hoxa9!1.04!12.48!Hoxa9;;chr13:40825465..40825469,-!p2@Tfap2a!1.03!9.83!Tfap2a;;chr13:53568191..53568219,-!p2@Msx2!1.03!9.71!Msx2;;chr5:77543935..77543947,-!p4@Hopx!1.03!9.71!Hopx;;chr6:97941770..97941784,+!p4@Mitf!1.02!9.47!Mitf;;chr1:165243792..165243808,-!p1@Prrx1!1.01!32.69!Prrx1;;chr1:19199236..19199258,+!p1@Tfap2b!1.01!9.17!Tfap2b;;chr15:50714356..50714368,-!p14@Trps1!1.01!9.17!Trps1;;chr9:69137716..69137744,+!p1@Rora!1.00!57.78!Rora;;chr9:31721051..31721068,-!p3@Barx2!0.99!8.69!Barx2;;chr14:99697871..99697934,+!p1@Klf5!0.97!170.93!Klf5;;chr3:130813200..130813252,+!p1@Lef1!0.97!38.06!Lef1;;chr10:67000609..67000625,+!p1@Egr2!0.97!19.90!Egr2;;chr17:14011485..14011507,+!p2@Mllt4!0.97!8.38!Mllt4;;chr6:115372099..115372121,+!p5@Pparg!0.97!8.32!Pparg;;chr1:194979315..194979359,+!p1@Irf6!0.96!50.78!Irf6;;chr12:37835120..37835133,+!p2@Meox2!0.96!11.70!Meox2;;chr11:106128936..106128955,-!p4@Smarcd2!0.96!9.41!Smarcd2;;chr2:120365588..120365602,-!p2@Zfp106!0.94!13.21!Zfp106;;chr2:160192793..160192809,-!p1@Mafb!0.93!118.39!Mafb;;chr15:103170533..103170556,-!p1@Zfp385a!0.93!29.01!Zfp385a;;chr15:103170516..103170531,-!p2@Zfp385a!0.93!18.52!Zfp385a;;chr3:130813736..130813752,+!p3@Lef1!0.93!10.80!Lef1;;chr17:14011569..14011589,+!p8@Mllt4!0.93!7.42!Mllt4;;chr12:25257114..25257131,+!p4@Grhl1!0.92!9.59!Grhl1;;chr13:40829337..40829360,-!p5@Tfap2a!0.92!7.24!Tfap2a;;chr6:51382677..51382783,+!p1@Nfe2l3!0.91!18.82!Nfe2l3;;chr1:194979361..194979373,+!p2@Irf6!0.91!9.71!Irf6;;chr13:72766234..72766243,+!p3@Irx2!0.91!7.06!Irx2;;chr17:14011545..14011564,+!p6@Mllt4!0.91!7.06!Mllt4;;chr6:53523358..53523388,+!p1@Creb5!0.90!87.33!Creb5;;chr4:126413480..126413489,-!p1@Tfap2e!0.90!6.94!Tfap2e;;chr11:96143666..96143725,+!p1@Hoxb8!0.89!7.78!Hoxb8;;chr4:84321300..84321315,-!p2@Bnc2!0.88!8.26!Bnc2;;chr5:38215819..38215823,-!p1@Msx1!0.87!17.43!Msx1;;chr17:14011529..14011544,+!p7@Mllt4!0.87!6.45!Mllt4;;chr11:23980664..23980706,+!p2@Bcl11a!0.86!28.83!Bcl11a;;chr6:52167459..52167492,-!p1@Hoxa7!0.86!7.54!Hoxa7;;chr3:99057677..99057730,+!p2@Tbx15!0.86!6.27!Tbx15;;chr13:53568081..53568094,-!p3@Msx2!0.86!6.27!Msx2;;chr4:135129447..135129467,-!p2@Grhl3!0.85!7.42!Grhl3;;chr1:93698068..93698085,+!p2@Twist2!0.85!7.24!Twist2;;chr14:118636238..118636257,-!p2@Sox21!0.85!6.09!Sox21;;chr9:31720903..31720918,-!p2@Barx2!0.85!6.03!Barx2;;chr7:35904304..35904320,+!p1@Cebpa!0.84!127.86!Cebpa;;chr1:165243591..165243625,-!p2@Prrx1!0.84!9.29!Prrx1;;chr2:103143336..103143367,-!p1@Ehf!0.83!9.65!Ehf;;chr2:74542918..74542971,+!p1@Hoxd8!0.82!8.75!Hoxd8;;chr19:25746898..25746910,+!p1@Dmrt2!0.82!8.69!Dmrt2;;chr1:19202352..19202354,+!p2@Tfap2b!0.82!5.67!Tfap2b;;chr11:94981134..94981147,+!p2@Dlx3!0.81!5.49!Dlx3;;chr18:76219118..76219155,+!p1@Zbtb7c!0.80!9.65!Zbtb7c;;chr2:9800094..9800108,-!p3@Gata3!0.80!5.31!Gata3;;chr13:73398004..73398017,+!p2@Irx4!0.80!5.25!Irx4;;chr10:44178493..44178520,-!p3@Prdm1!0.79!7.36!Prdm1;;chr7:89137163..89137200,-!p1@Bnc1!0.79!6.39!Bnc1;;chr4:148178459..148178482,+!p4@Casz1!0.79!5.13!Casz1;;chr10:66998241..66998263,+!p2@Egr2!0.79!5.13!Egr2;;chr1:19199021..19199048,+!p8@Tfap2b!0.79!5.13!Tfap2b;;chr4:148178529..148178548,+!p3@Casz1!0.78!12.55!Casz1;;chr1:120950098..120950132,-!p2@Gli2!0.78!12.24!Gli2;;chr10:44178375..44178390,-!p2@Prdm1!0.78!7.00!Prdm1;;chr6:128250380..128250442,-!p2@Tead4!0.78!6.51!Tead4;;chr6:52190467..52190500,-!p1@Hoxa10!0.78!5.07!Hoxa10;;chr4:87452200..87452229,-!p2@Mllt3!0.77!10.98!Mllt3;;chr13:72101161..72101177,-!p2@Irx1!0.76!6.82!Irx1;;chr14:64562503..64562524,+!p1@Sox7!0.75!29.67!Sox7;;chr4:148275237..148275311,+!p2@Casz1!0.75!20.81!Casz1;;chr13:40826150..40826167,-!p3@Tfap2a!0.75!5.25!Tfap2a;;chr13:40824310..40824314,-!p6@Tfap2a!0.75!4.64!Tfap2a;;chr4:82151653..82151706,-!p2@Nfib!0.74!139.50!Nfib;;chr15:37162796..37162828,+!p1@Grhl2!0.74!7.96!Grhl2;;chr8:90328310..90328362,-!p3@Zfp423!0.74!5.31!Zfp423;;chr9:31720746..31720762,-!p4@Barx2!0.74!4.52!Barx2;;chr12:25257298..25257323,+!p5@Grhl1!0.74!4.52!Grhl1;;chr3:99057256..99057268,+!p3@Tbx15!0.74!4.52!Tbx15;;chr3:99044284..99044308,+!p4@Tbx15!0.74!4.46!Tbx15;;chr12:34642682..34642753,+!p2@Twist1!0.73!12.61!Twist1;;chr13:31898496..31898519,+!p3@Foxc1!0.73!7.42!Foxc1;;chr10:44178575..44178590,-!p5@Prdm1!0.72!5.37!Prdm1;;chr15:37163124..37163153,+!p3@Grhl2!0.72!4.22!Grhl2;;chr15:102087737..102087801,-!p3@Rarg!0.71!7.18!Rarg;;chr13:72101141..72101158,-!p3@Irx1!0.71!5.31!Irx1;;chr9:31720817..31720829,-!p5@Barx2!0.71!4.10!Barx2;;chr1:19199119..19199134,+!p4@Tfap2b!0.71!4.10!Tfap2b;;chr1:19199221..19199234,+!p6@Tfap2b!0.71!4.10!Tfap2b;;chr16:92697560..92697592,-!p2@Runx1!0.70!28.23!Runx1;;chr8:94881733..94881790,+!p1@Irx5!0.70!8.38!Irx5;;chr15:37163065..37163092,+!p4@Grhl2!0.70!3.98!Grhl2;;chr10:12810631..12810649,+!p1@Plagl1!0.69!116.16!Plagl1;;chr6:52167434..52167450,-!p3@Hoxa7!0.69!3.92!Hoxa7;;chr6:131338435..131338482,-!p1@Csda!0.68!414.11!Csda;;chr4:87452180..87452196,-!p3@Mllt3!0.68!8.08!Mllt3;;chr2:74543397..74543435,+!p2@Hoxd8!0.68!3.80!Hoxd8;;chr2:38194778..38194798,+!p3@Lhx2!0.68!3.80!Lhx2;;chr7:119885539..119885574,+!p3@Tead1!0.68!3.74!Tead1;;chr11:69468531..69468557,+!p1@Sox15!0.68!3.74!Sox15;;chr16:14705925..14705951,+!p1@Snai2!0.67!29.73!Snai2;;chr2:133377954..133377973,+!p1@Bmp2!0.67!13.15!Bmp2;;chr4:122673187..122673201,+!p2@Mycl1!0.67!7.06!Mycl1;;chr10:44178474..44178487,-!p4@Prdm1!0.67!5.61!Prdm1;;chr5:32438831..32438878,+!p1@Fosl2!0.66!42.46!Fosl2;;chr4:134708451..134708469,+!p1@Runx3!0.66!6.82!Runx3;;chr6:52167513..52167549,-!p2@Hoxa7!0.66!5.31!Hoxa7;;chr11:101646127..101646147,-!p5@Etv4!0.66!4.28!Etv4;;chr15:50721942..50721987,-!p13@Trps1!0.66!4.22!Trps1;;chr13:53568169..53568179,-!p4@Msx2!0.66!3.62!Msx2;;chr15:102828642..102828653,+!p2@Hoxc6!0.66!3.62!Hoxc6;;chr4:84321317..84321332,-!p4@Bnc2!0.66!3.62!Bnc2;;chr2:93482464..93482491,+!p1@Alx4!0.66!3.56!Alx4;;chr6:88143711..88143717,+!p2@Gata2!0.65!5.97!Gata2;;chr11:96145450..96145517,+!p2@Hoxb7!0.65!5.61!Hoxb7;;chr12:37835203..37835218,+!p3@Meox2!0.65!4.22!Meox2;;chr13:73397921..73397935,+!p3@Irx4!0.65!3.50!Irx4;;chr15:102820964..102821006,+!p1@Hoxc8!0.65!3.44!Hoxc8;;chr17:28409136..28409150,+!p3@Ppard!0.65!3.44!Ppard;;chr4:32325688..32325777,+!p1@Bach2!0.64!34.32!Bach2;;chr8:87297280..87297326,-!p2@Nfix!0.64!8.93!Nfix;;chr10:80599248..80599261,+!p3@Zbtb7a!0.64!6.57!Zbtb7a;;chr2:30700857..30700873,+!p3@Prrx2!0.64!4.89!Prrx2;;chr7:89137554..89137565,-!p2@Bnc1!0.64!3.38!Bnc1;;chr16:25684232..25684285,+!p2@Trp63!0.64!3.38!Trp63;;chr4:82151274..82151290,-!p3@Nfib!0.63!62.48!Nfib;;chr4:82151622..82151643,-!p4@Nfib!0.63!15.74!Nfib;;chr2:27532479..27532509,+!p3@Rxra!0.63!7.36!Rxra;;chr15:37162834..37162849,+!p2@Grhl2!0.63!3.98!Grhl2;;chr11:44430812..44430838,+!p1@Ebf1!0.62!36.37!Ebf1;;chr6:86619104..86619119,-!p1@Mxd1!0.62!31.00!Mxd1;;chr5:135582751..135582788,+!p1@Mlxipl!0.62!14.90!Mlxipl;;chr6:6832076..6832092,-!p1@Dlx5!0.62!3.86!Dlx5;;chr1:19199095..19199114,+!p5@Tfap2b!0.62!3.20!Tfap2b;;chr15:102839948..102839975,+!p3@Hoxc6!0.62!3.14!Hoxc6;;chr18:35020854..35020869,+!p1@Egr1!0.61!144.15!Egr1;;chr5:6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r19:40969182..40969226,+!p1@Zfp518a!0.18!10.86!Zfp518a;;chr7:71083876..71083932,-!p2@Klf13!0.18!10.13!Klf13;;chr4:97444012..97444045,+!p4@Nfia!0.18!9.53!Nfia;;chr4:118967125..118967143,-!p2@Ybx1!0.18!7.90!Ybx1;;chr5:65194720..65194738,+!p2@Klf3!0.18!6.69!Klf3;;chr2:119698241..119698291,+!p2@Mga!0.18!5.91!Mga;;chr2:44968775..44968795,-!p4@Zeb2!0.18!5.73!Zeb2;;chr11:83943060..83943082,-!p2@Tada2a!0.18!5.49!Tada2a;;chr13:67461490..67461531,-!p1@Zfp595,p1@Zfp953!0.18!4.89!Zfp953;;chr13:37917925..37917950,+!p4@Rreb1!0.18!4.58!Rreb1;;chr17:23004125..23004157,-!p3@Zfp945!0.18!3.44!Zfp945;;chr15:102301130..102301147,+!p3@Pcbp2!0.18!3.38!Pcbp2;;chr14:52898807..52898863,+!p2@Tox4!0.18!3.26!Tox4;;chr13:67182439..67182491,-!p2@Zfp708!0.18!2.71!Zfp708;;chr8:81923398..81923409,-!p4@Smad1!0.18!2.59!Smad1;;chr13:5860740..5860747,+!p4@Klf6!0.18!2.11!Klf6;;chr15:76709662..76709676,+!p2@Zfp7!0.18!2.05!Zfp7;;chr13:44825008..44825066,+!p5@Jarid2!0.18!1.87!Jarid2;;chr6:145813905..145813932,-!p2@Bhlhe41!0.18!1.81!Bhlhe41;;chr2:160698668..160698679,-!p4@Zhx3!0.18!1.69!Zhx3;;chr7:148513637..148513648,-!p6@Deaf1!0.18!1.57!Deaf1;;chr3:34548909..34548927,+!p1@Sox2!0.18!1.51!Sox2;;chr5:9161608..9161619,-!p3@Dmtf1!0.18!1.39!Dmtf1;;chr16:95923651..95923701,+!p3@Ets2!0.18!1.39!Ets2;;chr3:30993859..30993870,+!p5@Skil!0.18!1.21!Skil;;chr14:65977415..65977426,+!p6@Zfp395!0.18!1.21!Zfp395;;chr5:92391466..92391471,+!p2@Thap6!0.18!1.15!Thap6;;chr18:69504229..69504240,+!p16@Tcf4!0.18!0.97!Tcf4;;chr13:15555555..15555574,+!p5@Gli3!0.18!0.97!Gli3;;chr5:53981578..53981590,+!p4@Rbpj!0.18!0.90!Rbpj;;chr8:94325273..94325288,-!p5@Irx3!0.18!0.84!Irx3;;chr7:38558544..38558566,-!p4@Zfp536!0.18!0.72!Zfp536;;chr5:38611720..38611799,+!p1@Lyar!0.17!36.01!Lyar;;chr6:47544966..47545046,-!p1@Ezh2!0.17!27.50!Ezh2;;chr17:87153028..87153049,+!p2@Epas1!0.17!27.14!Epas1;;chr7:13404186..13404214,-!p1@Zfp329!0.17!25.39!Zfp329;;chr5:53981692..53981768,+!p2@Rbpj!0.17!23.70!Rbpj;;chr16:84835146..84835186,+!p2@Gabpa!0.17!17.37!Gabpa;;chr17:24806629..24806672,+!p1@Zfp598!0.17!14.05!Zfp598;;chr10:20032304..20032324,+!p2@Bclaf1!0.17!12.00!Bclaf1;;chr15:96117968..96118035,+!p1@Arid2!0.17!11.70!Arid2;;chr8:107694628..107694659,+!p1@Cbfb!0.17!11.28!Cbfb;;chr3:152059628..152059666,+!p2@Gm8261,p2@Zzz3!0.17!10.80!Zzz3;;chr8:72498266..72498306,-!p3@Gatad2a!0.17!8.32!Gatad2a;;chr4:102787317..102787364,+!p3@Mier1!0.17!6.94!Mier1;;chr14:65977324..65977372,+!p2@Zfp395!0.17!6.76!Zfp395;;chr10:79389784..79389833,+!p1@Arid3a!0.17!6.45!Arid3a;;chr1:193961776..193961815,-!p2@Rcor3!0.17!6.45!Rcor3;;chr9:96619823..96619898,-!p2@Zbtb38!0.17!5.13!Zbtb38;;chr8:72498134..72498156,-!p7@Gatad2a!0.17!4.34!Gatad2a;;chr4:62626594..62626651,+!p1@Zfp618!0.17!4.22!Zfp618;;chr16:33380851..33380873,+!p3@Zfp148!0.17!3.92!Zfp148;;chr17:84587167..84587239,-!p2@Zfp36l2!0.17!3.80!Zfp36l2;;chr2:128769696..128769712,-!p2@Zc3h8!0.17!3.50!Zc3h8;;chr1:170362437..170362478,-!p5@Pbx1!0.17!3.38!Pbx1;;chr11:74644716..74644780,+!p2@Mnt!0.17!3.26!Mnt;;chr6:72849808..72849837,-!p4@Kcmf1!0.17!3.20!Kcmf1;;chr7:30875418..30875454,-!p2@Zfp566,p2@Zfp82!0.17!2.96!Zfp566;;chr4:135842030..135842065,+!p3@Zfp46!0.17!2.77!Zfp46;;chr18:80348151..80348181,-!p2@Adnp2!0.17!2.65!Adnp2;;chr5:107125778..107125803,-!p4@Zfp644!0.17!2.17!Zfp644;;chr6:28211956..28211967,-!p2@Zfp800!0.17!1.99!Zfp800;; | |expression_enrichment_score=chr11:94981424..94981439,+!p1@Dlx3!2.18!170.99!Dlx3;;chr16:25801993..25802014,+!p1@Trp63!2.14!138.36!Trp63;;chr11:121380640..121380655,-!p1@Zfp750!2.01!165.14!Zfp750;;chr2:9800207..9800234,-!p1@Gata3!1.82!189.08!Gata3;;chr13:53568104..53568156,-!p1@Msx2!1.79!88.00!Msx2;;chr15:102751603..102751630,+!p1@Hoxc13!1.76!56.81!Hoxc13;;chr9:31720843..31720888,-!p1@Barx2!1.74!59.47!Barx2;;chr13:72766250..72766273,+!p1@Irx2!1.72!77.32!Irx2;;chr11:121380594..121380609,-!p2@Zfp750!1.71!84.98!Zfp750;;chr13:40829137..40829205,-!p1@Tfap2a!1.71!56.33!Tfap2a;;chr13:72766279..72766296,+!p2@Irx2!1.59!55.79!Irx2;;chr4:135129538..135129558,-!p1@Grhl3!1.58!54.58!Grhl3;;chr9:43013917..43013968,-!p1@Pou2f3!1.58!37.27!Pou2f3;;chr11:121380611..121380625,-!p3@Zfp750!1.55!41.25!Zfp750;;chr5:77543897..77543911,-!p2@Hopx!1.54!63.51!Hopx;;chr19:5560600..5560617,-!p1@Ovol1!1.50!37.21!Ovol1;;chr4:46356509..46356527,+!p1@Foxe1!1.46!27.99!Foxe1;;chr14:118636214..118636235,-!p1@Sox21!1.44!31.85!Sox21;;chr12:34642510..34642530,+!p1@Twist1!1.43!80.52!Twist1;;chr3:99057269..99057306,+!p1@Tbx15!1.43!31.00!Tbx15;;chr11:96880072..96880079,+!p1@Sp6!1.41!24.49!Sp6;;chr2:38206580..38206600,+!p2@Lhx2!1.40!29.49!Lhx2;;chr12:25257141..25257173,+!p1@Grhl1!1.39!47.65!Grhl1;;chr2:172375081..172375105,+!p1@Tfap2c!1.37!22.32!Tfap2c;;chr2:38206744..38206766,+!p1@Lhx2!1.34!25.21!Lhx2;;chr6:70906450..70906454,+!p1@Foxi3!1.30!19.00!Foxi3;;chr15:97738692..97738747,-!p1@Vdr!1.25!90.11!Vdr;;chr11:78200071..78200100,-!p1@Foxn1!1.25!16.71!Foxn1;;chr19:5560570..5560582,-!p2@Ovol1!1.24!16.53!Ovol1;;chr13:40826961..40827001,-!p4@Tfap2a!1.22!15.62!Tfap2a;;chr4:55545337..55545357,-!p1@Klf4!1.21!218.57!Klf4;;chr7:19946556..19946611,+!p1@Ppp1r13l!1.20!58.38!Ppp1r13l;;chr12:25257265..25257294,+!p2@Grhl1!1.19!14.48!Grhl1;;chr13:83643159..83643226,+!p3@Mef2c!1.18!13.99!Mef2c;;chr4:124334894..124334899,+!p1@Pou3f1!1.16!17.31!Pou3f1;;chr7:6649134..6649167,-!p1@Zim1!1.15!70.20!Zim1;;chr14:70477113..70477173,+!p1@Egr3!1.15!12.97!Egr3;;chr4:148178559..148178603,+!p1@Casz1!1.14!36.61!Casz1;;chr15:35225845..35225867,+!p1@Osr2!1.14!32.57!Osr2;;chr10:44178521..44178557,-!p1@Prdm1!1.13!22.01!Prdm1;;chr15:102087880..102087927,-!p2@Rarg!1.12!27.99!Rarg;;chr13:72101178..72101203,-!p1@Irx1!1.12!19.06!Irx1;;chr15:102828658..102828678,+!p1@Hoxc6!1.12!12.18!Hoxc6;;chr12:109242266..109242295,-!p1@Bcl11b!1.11!98.55!Bcl11b;;chr16:18587076..18587106,-!p1@Tbx1!1.11!16.83!Tbx1;;chr2:71384802..71384815,-!p1@Dlx2!1.11!14.84!Dlx2;;chr12:37835141..37835194,+!p1@Meox2!1.10!36.19!Meox2;;chr18:80909801..80909819,-!p1@Nfatc1!1.09!67.13!Nfatc1;;chr12:25257176..25257190,+!p3@Grhl1!1.09!12.67!Grhl1;;chr15:102751578..102751600,+!p2@Hoxc13!1.09!11.40!Hoxc13;;chr13:73397958..73397994,+!p1@Irx4!1.09!11.34!Irx4;;chr10:126778916..126778974,-!p1@Gli1!1.08!24.79!Gli1;;chr1:93698030..93698064,+!p1@Twist2!1.07!21.59!Twist2;;chr6:115372058..115372085,+!p3@Pparg!1.05!10.19!Pparg;;chr6:52176164..52176195,-!p1@Hoxa9!1.04!12.48!Hoxa9;;chr13:40825465..40825469,-!p2@Tfap2a!1.03!9.83!Tfap2a;;chr13:53568191..53568219,-!p2@Msx2!1.03!9.71!Msx2;;chr5:77543935..77543947,-!p4@Hopx!1.03!9.71!Hopx;;chr6:97941770..97941784,+!p4@Mitf!1.02!9.47!Mitf;;chr1:165243792..165243808,-!p1@Prrx1!1.01!32.69!Prrx1;;chr1:19199236..19199258,+!p1@Tfap2b!1.01!9.17!Tfap2b;;chr15:50714356..50714368,-!p14@Trps1!1.01!9.17!Trps1;;chr9:69137716..69137744,+!p1@Rora!1.00!57.78!Rora;;chr9:31721051..31721068,-!p3@Barx2!0.99!8.69!Barx2;;chr14:99697871..99697934,+!p1@Klf5!0.97!170.93!Klf5;;chr3:130813200..130813252,+!p1@Lef1!0.97!38.06!Lef1;;chr10:67000609..67000625,+!p1@Egr2!0.97!19.90!Egr2;;chr17:14011485..14011507,+!p2@Mllt4!0.97!8.38!Mllt4;;chr6:115372099..115372121,+!p5@Pparg!0.97!8.32!Pparg;;chr1:194979315..194979359,+!p1@Irf6!0.96!50.78!Irf6;;chr12:37835120..37835133,+!p2@Meox2!0.96!11.70!Meox2;;chr11:106128936..106128955,-!p4@Smarcd2!0.96!9.41!Smarcd2;;chr2:120365588..120365602,-!p2@Zfp106!0.94!13.21!Zfp106;;chr2:160192793..160192809,-!p1@Mafb!0.93!118.39!Mafb;;chr15:103170533..103170556,-!p1@Zfp385a!0.93!29.01!Zfp385a;;chr15:103170516..103170531,-!p2@Zfp385a!0.93!18.52!Zfp385a;;chr3:130813736..130813752,+!p3@Lef1!0.93!10.80!Lef1;;chr17:14011569..14011589,+!p8@Mllt4!0.93!7.42!Mllt4;;chr12:25257114..25257131,+!p4@Grhl1!0.92!9.59!Grhl1;;chr13:40829337..40829360,-!p5@Tfap2a!0.92!7.24!Tfap2a;;chr6:51382677..51382783,+!p1@Nfe2l3!0.91!18.82!Nfe2l3;;chr1:194979361..194979373,+!p2@Irf6!0.91!9.71!Irf6;;chr13:72766234..72766243,+!p3@Irx2!0.91!7.06!Irx2;;chr17:14011545..14011564,+!p6@Mllt4!0.91!7.06!Mllt4;;chr6:53523358..53523388,+!p1@Creb5!0.90!87.33!Creb5;;chr4:126413480..126413489,-!p1@Tfap2e!0.90!6.94!Tfap2e;;chr11:96143666..96143725,+!p1@Hoxb8!0.89!7.78!Hoxb8;;chr4:84321300..84321315,-!p2@Bnc2!0.88!8.26!Bnc2;;chr5:38215819..38215823,-!p1@Msx1!0.87!17.43!Msx1;;chr17:14011529..14011544,+!p7@Mllt4!0.87!6.45!Mllt4;;chr11:23980664..23980706,+!p2@Bcl11a!0.86!28.83!Bcl11a;;chr6:52167459..52167492,-!p1@Hoxa7!0.86!7.54!Hoxa7;;chr3:99057677..99057730,+!p2@Tbx15!0.86!6.27!Tbx15;;chr13:53568081..53568094,-!p3@Msx2!0.86!6.27!Msx2;;chr4:135129447..135129467,-!p2@Grhl3!0.85!7.42!Grhl3;;chr1:93698068..93698085,+!p2@Twist2!0.85!7.24!Twist2;;chr14:118636238..118636257,-!p2@Sox21!0.85!6.09!Sox21;;chr9:31720903..31720918,-!p2@Barx2!0.85!6.03!Barx2;;chr7:35904304..35904320,+!p1@Cebpa!0.84!127.86!Cebpa;;chr1:165243591..165243625,-!p2@Prrx1!0.84!9.29!Prrx1;;chr2:103143336..103143367,-!p1@Ehf!0.83!9.65!Ehf;;chr2:74542918..74542971,+!p1@Hoxd8!0.82!8.75!Hoxd8;;chr19:25746898..25746910,+!p1@Dmrt2!0.82!8.69!Dmrt2;;chr1:19202352..19202354,+!p2@Tfap2b!0.82!5.67!Tfap2b;;chr11:94981134..94981147,+!p2@Dlx3!0.81!5.49!Dlx3;;chr18:76219118..76219155,+!p1@Zbtb7c!0.80!9.65!Zbtb7c;;chr2:9800094..9800108,-!p3@Gata3!0.80!5.31!Gata3;;chr13:73398004..73398017,+!p2@Irx4!0.80!5.25!Irx4;;chr10:44178493..44178520,-!p3@Prdm1!0.79!7.36!Prdm1;;chr7:89137163..89137200,-!p1@Bnc1!0.79!6.39!Bnc1;;chr4:148178459..148178482,+!p4@Casz1!0.79!5.13!Casz1;;chr10:66998241..66998263,+!p2@Egr2!0.79!5.13!Egr2;;chr1:19199021..19199048,+!p8@Tfap2b!0.79!5.13!Tfap2b;;chr4:148178529..148178548,+!p3@Casz1!0.78!12.55!Casz1;;chr1:120950098..120950132,-!p2@Gli2!0.78!12.24!Gli2;;chr10:44178375..44178390,-!p2@Prdm1!0.78!7.00!Prdm1;;chr6:128250380..128250442,-!p2@Tead4!0.78!6.51!Tead4;;chr6:52190467..52190500,-!p1@Hoxa10!0.78!5.07!Hoxa10;;chr4:87452200..87452229,-!p2@Mllt3!0.77!10.98!Mllt3;;chr13:72101161..72101177,-!p2@Irx1!0.76!6.82!Irx1;;chr14:64562503..64562524,+!p1@Sox7!0.75!29.67!Sox7;;chr4:148275237..148275311,+!p2@Casz1!0.75!20.81!Casz1;;chr13:40826150..40826167,-!p3@Tfap2a!0.75!5.25!Tfap2a;;chr13:40824310..40824314,-!p6@Tfap2a!0.75!4.64!Tfap2a;;chr4:82151653..82151706,-!p2@Nfib!0.74!139.50!Nfib;;chr15:37162796..37162828,+!p1@Grhl2!0.74!7.96!Grhl2;;chr8:90328310..90328362,-!p3@Zfp423!0.74!5.31!Zfp423;;chr9:31720746..31720762,-!p4@Barx2!0.74!4.52!Barx2;;chr12:25257298..25257323,+!p5@Grhl1!0.74!4.52!Grhl1;;chr3:99057256..99057268,+!p3@Tbx15!0.74!4.52!Tbx15;;chr3:99044284..99044308,+!p4@Tbx15!0.74!4.46!Tbx15;;chr12:34642682..34642753,+!p2@Twist1!0.73!12.61!Twist1;;chr13:31898496..31898519,+!p3@Foxc1!0.73!7.42!Foxc1;;chr10:44178575..44178590,-!p5@Prdm1!0.72!5.37!Prdm1;;chr15:37163124..37163153,+!p3@Grhl2!0.72!4.22!Grhl2;;chr15:102087737..102087801,-!p3@Rarg!0.71!7.18!Rarg;;chr13:72101141..72101158,-!p3@Irx1!0.71!5.31!Irx1;;chr9:31720817..31720829,-!p5@Barx2!0.71!4.10!Barx2;;chr1:19199119..19199134,+!p4@Tfap2b!0.71!4.10!Tfap2b;;chr1:19199221..19199234,+!p6@Tfap2b!0.71!4.10!Tfap2b;;chr16:92697560..92697592,-!p2@Runx1!0.70!28.23!Runx1;;chr8:94881733..94881790,+!p1@Irx5!0.70!8.38!Irx5;;chr15:37163065..37163092,+!p4@Grhl2!0.70!3.98!Grhl2;;chr10:12810631..12810649,+!p1@Plagl1!0.69!116.16!Plagl1;;chr6:52167434..52167450,-!p3@Hoxa7!0.69!3.92!Hoxa7;;chr6:131338435..131338482,-!p1@Csda!0.68!414.11!Csda;;chr4:87452180..87452196,-!p3@Mllt3!0.68!8.08!Mllt3;;chr2:74543397..74543435,+!p2@Hoxd8!0.68!3.80!Hoxd8;;chr2:38194778..38194798,+!p3@Lhx2!0.68!3.80!Lhx2;;chr7:119885539..119885574,+!p3@Tead1!0.68!3.74!Tead1;;chr11:69468531..69468557,+!p1@Sox15!0.68!3.74!Sox15;;chr16:14705925..14705951,+!p1@Snai2!0.67!29.73!Snai2;;chr2:133377954..133377973,+!p1@Bmp2!0.67!13.15!Bmp2;;chr4:122673187..122673201,+!p2@Mycl1!0.67!7.06!Mycl1;;chr10:44178474..44178487,-!p4@Prdm1!0.67!5.61!Prdm1;;chr5:32438831..32438878,+!p1@Fosl2!0.66!42.46!Fosl2;;chr4:134708451..134708469,+!p1@Runx3!0.66!6.82!Runx3;;chr6:52167513..52167549,-!p2@Hoxa7!0.66!5.31!Hoxa7;;chr11:101646127..101646147,-!p5@Etv4!0.66!4.28!Etv4;;chr15:50721942..50721987,-!p13@Trps1!0.66!4.22!Trps1;;chr13:53568169..53568179,-!p4@Msx2!0.66!3.62!Msx2;;chr15:102828642..102828653,+!p2@Hoxc6!0.66!3.62!Hoxc6;;chr4:84321317..84321332,-!p4@Bnc2!0.66!3.62!Bnc2;;chr2:93482464..93482491,+!p1@Alx4!0.66!3.56!Alx4;;chr6:88143711..88143717,+!p2@Gata2!0.65!5.97!Gata2;;chr11:96145450..96145517,+!p2@Hoxb7!0.65!5.61!Hoxb7;;chr12:37835203..37835218,+!p3@Meox2!0.65!4.22!Meox2;;chr13:73397921..73397935,+!p3@Irx4!0.65!3.50!Irx4;;chr15:102820964..102821006,+!p1@Hoxc8!0.65!3.44!Hoxc8;;chr17:28409136..28409150,+!p3@Ppard!0.65!3.44!Ppard;;chr4:32325688..32325777,+!p1@Bach2!0.64!34.32!Bach2;;chr8:87297280..87297326,-!p2@Nfix!0.64!8.93!Nfix;;chr10:80599248..80599261,+!p3@Zbtb7a!0.64!6.57!Zbtb7a;;chr2:30700857..30700873,+!p3@Prrx2!0.64!4.89!Prrx2;;chr7:89137554..89137565,-!p2@Bnc1!0.64!3.38!Bnc1;;chr16:25684232..25684285,+!p2@Trp63!0.64!3.38!Trp63;;chr4:82151274..82151290,-!p3@Nfib!0.63!62.48!Nfib;;chr4:82151622..82151643,-!p4@Nfib!0.63!15.74!Nfib;;chr2:27532479..27532509,+!p3@Rxra!0.63!7.36!Rxra;;chr15:37162834..37162849,+!p2@Grhl2!0.63!3.98!Grhl2;;chr11:44430812..44430838,+!p1@Ebf1!0.62!36.37!Ebf1;;chr6:86619104..86619119,-!p1@Mxd1!0.62!31.00!Mxd1;;chr5:135582751..135582788,+!p1@Mlxipl!0.62!14.90!Mlxipl;;chr6:6832076..6832092,-!p1@Dlx5!0.62!3.86!Dlx5;;chr1:19199095..19199114,+!p5@Tfap2b!0.62!3.20!Tfap2b;;chr15:102839948..102839975,+!p3@Hoxc6!0.62!3.14!Hoxc6;;chr18:35020854..35020869,+!p1@Egr1!0.61!144.15!Egr1;;chr5:6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r19:40969182..40969226,+!p1@Zfp518a!0.18!10.86!Zfp518a;;chr7:71083876..71083932,-!p2@Klf13!0.18!10.13!Klf13;;chr4:97444012..97444045,+!p4@Nfia!0.18!9.53!Nfia;;chr4:118967125..118967143,-!p2@Ybx1!0.18!7.90!Ybx1;;chr5:65194720..65194738,+!p2@Klf3!0.18!6.69!Klf3;;chr2:119698241..119698291,+!p2@Mga!0.18!5.91!Mga;;chr2:44968775..44968795,-!p4@Zeb2!0.18!5.73!Zeb2;;chr11:83943060..83943082,-!p2@Tada2a!0.18!5.49!Tada2a;;chr13:67461490..67461531,-!p1@Zfp595,p1@Zfp953!0.18!4.89!Zfp953;;chr13:37917925..37917950,+!p4@Rreb1!0.18!4.58!Rreb1;;chr17:23004125..23004157,-!p3@Zfp945!0.18!3.44!Zfp945;;chr15:102301130..102301147,+!p3@Pcbp2!0.18!3.38!Pcbp2;;chr14:52898807..52898863,+!p2@Tox4!0.18!3.26!Tox4;;chr13:67182439..67182491,-!p2@Zfp708!0.18!2.71!Zfp708;;chr8:81923398..81923409,-!p4@Smad1!0.18!2.59!Smad1;;chr13:5860740..5860747,+!p4@Klf6!0.18!2.11!Klf6;;chr15:76709662..76709676,+!p2@Zfp7!0.18!2.05!Zfp7;;chr13:44825008..44825066,+!p5@Jarid2!0.18!1.87!Jarid2;;chr6:145813905..145813932,-!p2@Bhlhe41!0.18!1.81!Bhlhe41;;chr2:160698668..160698679,-!p4@Zhx3!0.18!1.69!Zhx3;;chr7:148513637..148513648,-!p6@Deaf1!0.18!1.57!Deaf1;;chr3:34548909..34548927,+!p1@Sox2!0.18!1.51!Sox2;;chr5:9161608..9161619,-!p3@Dmtf1!0.18!1.39!Dmtf1;;chr16:95923651..95923701,+!p3@Ets2!0.18!1.39!Ets2;;chr3:30993859..30993870,+!p5@Skil!0.18!1.21!Skil;;chr14:65977415..65977426,+!p6@Zfp395!0.18!1.21!Zfp395;;chr5:92391466..92391471,+!p2@Thap6!0.18!1.15!Thap6;;chr18:69504229..69504240,+!p16@Tcf4!0.18!0.97!Tcf4;;chr13:15555555..15555574,+!p5@Gli3!0.18!0.97!Gli3;;chr5:53981578..53981590,+!p4@Rbpj!0.18!0.90!Rbpj;;chr8:94325273..94325288,-!p5@Irx3!0.18!0.84!Irx3;;chr7:38558544..38558566,-!p4@Zfp536!0.18!0.72!Zfp536;;chr5:38611720..38611799,+!p1@Lyar!0.17!36.01!Lyar;;chr6:47544966..47545046,-!p1@Ezh2!0.17!27.50!Ezh2;;chr17:87153028..87153049,+!p2@Epas1!0.17!27.14!Epas1;;chr7:13404186..13404214,-!p1@Zfp329!0.17!25.39!Zfp329;;chr5:53981692..53981768,+!p2@Rbpj!0.17!23.70!Rbpj;;chr16:84835146..84835186,+!p2@Gabpa!0.17!17.37!Gabpa;;chr17:24806629..24806672,+!p1@Zfp598!0.17!14.05!Zfp598;;chr10:20032304..20032324,+!p2@Bclaf1!0.17!12.00!Bclaf1;;chr15:96117968..96118035,+!p1@Arid2!0.17!11.70!Arid2;;chr8:107694628..107694659,+!p1@Cbfb!0.17!11.28!Cbfb;;chr3:152059628..152059666,+!p2@Gm8261,p2@Zzz3!0.17!10.80!Zzz3;;chr8:72498266..72498306,-!p3@Gatad2a!0.17!8.32!Gatad2a;;chr4:102787317..102787364,+!p3@Mier1!0.17!6.94!Mier1;;chr14:65977324..65977372,+!p2@Zfp395!0.17!6.76!Zfp395;;chr10:79389784..79389833,+!p1@Arid3a!0.17!6.45!Arid3a;;chr1:193961776..193961815,-!p2@Rcor3!0.17!6.45!Rcor3;;chr9:96619823..96619898,-!p2@Zbtb38!0.17!5.13!Zbtb38;;chr8:72498134..72498156,-!p7@Gatad2a!0.17!4.34!Gatad2a;;chr4:62626594..62626651,+!p1@Zfp618!0.17!4.22!Zfp618;;chr16:33380851..33380873,+!p3@Zfp148!0.17!3.92!Zfp148;;chr17:84587167..84587239,-!p2@Zfp36l2!0.17!3.80!Zfp36l2;;chr2:128769696..128769712,-!p2@Zc3h8!0.17!3.50!Zc3h8;;chr1:170362437..170362478,-!p5@Pbx1!0.17!3.38!Pbx1;;chr11:74644716..74644780,+!p2@Mnt!0.17!3.26!Mnt;;chr6:72849808..72849837,-!p4@Kcmf1!0.17!3.20!Kcmf1;;chr7:30875418..30875454,-!p2@Zfp566,p2@Zfp82!0.17!2.96!Zfp566;;chr4:135842030..135842065,+!p3@Zfp46!0.17!2.77!Zfp46;;chr18:80348151..80348181,-!p2@Adnp2!0.17!2.65!Adnp2;;chr5:107125778..107125803,-!p4@Zfp644!0.17!2.17!Zfp644;;chr6:28211956..28211967,-!p2@Zfp800!0.17!1.99!Zfp800;; | ||
|ffid_belonging_in_development=UBERON:0002532,UBERON:0006601,UBERON:0010316,FF:0000294 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
Line 36: | Line 42: | ||
|has_quality= | |has_quality= | ||
|id=FF:662-22H3 | |id=FF:662-22H3 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0011400 | ||
|is_obsolete= | |||
|library_id=CNhs11215 | |||
|library_id_phase_based=2:CNhs11215 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/mouse#cage;sample;662 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/mouse#cage;sample;662 | |||
|mm10bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.tissue.hCAGE/skin%252c%2520neonate%2520N03.CNhs11215.662-22H3.mm10.nobarcode.bam | |||
|mm10ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.tissue.hCAGE/skin%252c%2520neonate%2520N03.CNhs11215.662-22H3.mm10.nobarcode.ctss.bed.gz | |||
|mm9bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/skin%252c%2520neonate%2520N03.CNhs11215.662-22H3.mm9.nobarcode.bam | |||
|mm9ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/skin%252c%2520neonate%2520N03.CNhs11215.662-22H3.mm9.ctss.bed.gz | |||
|mm9fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/skin%252c%2520neonate%2520N03.CNhs11215.662-22H3.mm9.nobarcode.rdna.fa.gz | |||
|name=skin, neonate N03 | |name=skin, neonate N03 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
Line 42: | Line 60: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11215,LSID748,release008,COMPLETED | |profile_hcage=CNhs11215,LSID748,release008,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|repeat_enrich_byfamily=0.0278467451705003,0.00235103671480408,0.0251263865439911,0,0,0,0.223051545998322,0,0.0127170276859676,0,0,0.373497359144941,0,0,0,0,0,0,-0.11966596847864,0,0.0764788827549915,0,0,0.0984901092893304,0.114465736354675,0,0,0,0,0,0,0,0.393948519410203,0,0,0,0.0254340553719351,0.0254340553719351,0.0807432542768479,0.024090350300185,0.241217765902752,0.300778880136835,-0.220408001745238,0,0,0,0,0,0,0.429552345187898,0,0,0,0,0,-0.0165449112983274,0,0,0,0,-0.0174128997109397,0,0.10416279628064,0.0254340553719351,0.134138060633146,0.03890672919511,0.0963612560866523,-0.0592392479308416,0.367239406546284,0.0916376252833914,0.0722273824039347,0.102137373480485,0.0534669101522038,0.0494606362651129,0.134138060633146,0,0.0254340553719351,-0.0802089801932449,-0.316089695768103,0.142176113365755,0,0,0,0,0,0,-0.205802727800294,-0.375487151222427,-0.232355656412875,0,0,0,0,0 | |||
|rna_box=22 | |rna_box=22 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
Line 57: | Line 76: | ||
|rna_weight_ug= | |rna_weight_ug= | ||
|sample_age= | |sample_age= | ||
|sample_category=developmental | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
Line 76: | Line 96: | ||
|sample_tissue=skin | |sample_tissue=skin | ||
|top_motifs=HOX{A4,D4}:3.04039727014;FOS_FOS{B,L1}_JUN{B,D}:2.84529433955;TBP:2.6883336281;NANOG:2.57268020987;VSX1,2:2.5067209033;LEF1_TCF7_TCF7L1,2:2.31691500811;FOSL2:2.26970409476;TP53:2.09510165515;TFCP2:1.97052056551;T:1.92425996086;SPZ1:1.85247350355;BACH2:1.85035814239;GLI1..3:1.80595867919;TOPORS:1.78422602823;PDX1:1.52745828502;GCM1,2:1.52051451254;HMX1:1.48442287506;ZNF148:1.466240846;NKX2-3_NKX2-5:1.45545868842;ZNF238:1.39257008715;TEAD1:1.38606657579;FOX{I1,J2}:1.36297082091;EN1,2:1.33594508201;SP1:1.32264470134;GFI1:1.30624347073;TFAP4:1.29222577945;SMAD1..7,9:1.26742064055;TFAP2{A,C}:1.25448685074;GFI1B:1.21768226022;HLF:1.19470509554;XCPE1{core}:1.17727239033;NFATC1..3:1.13729446011;NKX2-1,4:1.10387372831;PITX1..3:1.09673235437;MYOD1:1.07135313962;CDC5L:1.0452463468;IKZF1:1.04442089576;GATA4:1.04282925772;TBX4,5:1.02831458988;TAL1_TCF{3,4,12}:1.00489404743;SOX5:0.965839671341;ATF2:0.956320187422;EP300:0.935003799468;FOXO1,3,4:0.89156619908;CRX:0.879737138717;TEF:0.875677590725;HSF1,2:0.845427853222;NFE2:0.837183022509;GTF2I:0.799684346276;AIRE:0.780776507204;SNAI1..3:0.734709928531;NKX3-2:0.721960649375;FOXQ1:0.705554025978;ATF4:0.703646099735;CEBPA,B_DDIT3:0.699378241349;PAX5:0.696767181952;EBF1:0.695051689417;SREBF1,2:0.684866533405;MAZ:0.66674081357;ZNF384:0.660579380492;MYFfamily:0.647936753686;MEF2{A,B,C,D}:0.641857524837;NFE2L2:0.638326465553;ESR1:0.624617210473;ALX4:0.607841067305;TLX1..3_NFIC{dimer}:0.592855991497;ALX1:0.567861403968;RBPJ:0.542967878938;MYBL2:0.542902429168;GTF2A1,2:0.539255375933;PAX2:0.538589474346;ZEB1:0.538581826196;TGIF1:0.538180914812;E2F1..5:0.534083695591;POU3F1..4:0.527329551835;ATF6:0.517265171263;SRF:0.514014763904;POU2F1..3:0.474662118651;HIC1:0.446416429188;MAFB:0.441415269838;POU6F1:0.393598933503;IKZF2:0.381001681206;FOXP3:0.365668772645;FOXP1:0.359432211668;FOXL1:0.357638487493;RORA:0.354980260994;HIF1A:0.350298380536;KLF4:0.343027480179;TFDP1:0.300599015649;bHLH_family:0.300309269731;PATZ1:0.292444515534;EGR1..3:0.272967860543;PRRX1,2:0.260074524099;TFAP2B:0.205804366754;SOX{8,9,10}:0.195425367975;FOXN1:0.185663539279;ZNF143:0.180341447523;MZF1:0.173619621794;MTF1:0.169551438811;STAT5{A,B}:0.155411389739;BREu{core}:0.147623256561;TLX2:0.145480100168;LHX3,4:0.118487236313;NFY{A,B,C}:0.0751596238714;SOX2:0.0740621863699;DBP:0.0708930547375;PRDM1:0.0667419540969;NKX2-2,8:0.0643411888979;IRF7:0.0486119267562;NKX3-1:0.0395140423936;NFE2L1:0.0237473421742;PAX8:0.0187644851032;MTE{core}:0.00570206143988;STAT2,4,6:0.000679199482281;HES1:-0.000954904356127;ZIC1..3:-0.0109025207419;NR3C1:-0.0121893732823;SOX17:-0.0162641877109;RFX2..5_RFXANK_RFXAP:-0.0318441442504;NHLH1,2:-0.041280738926;NFKB1_REL_RELA:-0.0468400655122;SPI1:-0.0610464534056;MED-1{core}:-0.0662626025678;POU5F1:-0.0678853144443;NKX6-1,2:-0.0756572125683;PAX6:-0.0862092446056;SPIB:-0.090391521966;HAND1,2:-0.111309214846;HOX{A5,B5}:-0.11404666908;HOXA9_MEIS1:-0.125375940153;ELK1,4_GABP{A,B1}:-0.130015367743;RREB1:-0.139585542635;HMGA1,2:-0.154241727796;NFIX:-0.177995141843;STAT1,3:-0.189899594691;NANOG{mouse}:-0.192924911044;ELF1,2,4:-0.19811834263;FOX{D1,D2}:-0.230412844764;ETS1,2:-0.23437810454;DMAP1_NCOR{1,2}_SMARC:-0.271507729799;NRF1:-0.283437408583;ZFP161:-0.292336245229;IRF1,2:-0.295162820185;REST:-0.313605763114;POU1F1:-0.322898347653;MYB:-0.333883024893;PAX1,9:-0.346356945996;RUNX1..3:-0.395251645904;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.406821000876;FOX{F1,F2,J1}:-0.412911982272;ATF5_CREB3:-0.45711517489;GZF1:-0.462704365993;ADNP_IRX_SIX_ZHX:-0.479033898152;HNF4A_NR2F1,2:-0.492685874704;ZBTB6:-0.496740336497;CREB1:-0.504040697599;AHR_ARNT_ARNT2:-0.526985816328;CUX2:-0.535586045849;ESRRA:-0.562184537495;HBP1_HMGB_SSRP1_UBTF:-0.571287701205;FOXA2:-0.573717226859;ZNF423:-0.588046353222;PPARG:-0.591619049743;RXRA_VDR{dimer}:-0.597858135725;LMO2:-0.63264245846;NR6A1:-0.65107579567;RFX1:-0.704384888664;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.715017254791;PAX4:-0.716701713052;ONECUT1,2:-0.726019364749;RXR{A,B,G}:-0.732469211594;HNF1A:-0.733406307321;GATA6:-0.745750759927;FOXM1:-0.780997455429;NFIL3:-0.804347789435;CDX1,2,4:-0.812887877986;ZBTB16:-0.826623468315;AR:-0.878066495125;FOXD3:-0.891258488935;JUN:-0.904649552749;BPTF:-0.913663067208;NR5A1,2:-0.940726501014;OCT4_SOX2{dimer}:-0.941001267233;UFEwm:-1.01446979168;PBX1:-1.23270941873;YY1:-1.29091270401;NR1H4:-1.33405805479;ARID5B:-1.39650508089;EVI1:-1.54901879254 | |top_motifs=HOX{A4,D4}:3.04039727014;FOS_FOS{B,L1}_JUN{B,D}:2.84529433955;TBP:2.6883336281;NANOG:2.57268020987;VSX1,2:2.5067209033;LEF1_TCF7_TCF7L1,2:2.31691500811;FOSL2:2.26970409476;TP53:2.09510165515;TFCP2:1.97052056551;T:1.92425996086;SPZ1:1.85247350355;BACH2:1.85035814239;GLI1..3:1.80595867919;TOPORS:1.78422602823;PDX1:1.52745828502;GCM1,2:1.52051451254;HMX1:1.48442287506;ZNF148:1.466240846;NKX2-3_NKX2-5:1.45545868842;ZNF238:1.39257008715;TEAD1:1.38606657579;FOX{I1,J2}:1.36297082091;EN1,2:1.33594508201;SP1:1.32264470134;GFI1:1.30624347073;TFAP4:1.29222577945;SMAD1..7,9:1.26742064055;TFAP2{A,C}:1.25448685074;GFI1B:1.21768226022;HLF:1.19470509554;XCPE1{core}:1.17727239033;NFATC1..3:1.13729446011;NKX2-1,4:1.10387372831;PITX1..3:1.09673235437;MYOD1:1.07135313962;CDC5L:1.0452463468;IKZF1:1.04442089576;GATA4:1.04282925772;TBX4,5:1.02831458988;TAL1_TCF{3,4,12}:1.00489404743;SOX5:0.965839671341;ATF2:0.956320187422;EP300:0.935003799468;FOXO1,3,4:0.89156619908;CRX:0.879737138717;TEF:0.875677590725;HSF1,2:0.845427853222;NFE2:0.837183022509;GTF2I:0.799684346276;AIRE:0.780776507204;SNAI1..3:0.734709928531;NKX3-2:0.721960649375;FOXQ1:0.705554025978;ATF4:0.703646099735;CEBPA,B_DDIT3:0.699378241349;PAX5:0.696767181952;EBF1:0.695051689417;SREBF1,2:0.684866533405;MAZ:0.66674081357;ZNF384:0.660579380492;MYFfamily:0.647936753686;MEF2{A,B,C,D}:0.641857524837;NFE2L2:0.638326465553;ESR1:0.624617210473;ALX4:0.607841067305;TLX1..3_NFIC{dimer}:0.592855991497;ALX1:0.567861403968;RBPJ:0.542967878938;MYBL2:0.542902429168;GTF2A1,2:0.539255375933;PAX2:0.538589474346;ZEB1:0.538581826196;TGIF1:0.538180914812;E2F1..5:0.534083695591;POU3F1..4:0.527329551835;ATF6:0.517265171263;SRF:0.514014763904;POU2F1..3:0.474662118651;HIC1:0.446416429188;MAFB:0.441415269838;POU6F1:0.393598933503;IKZF2:0.381001681206;FOXP3:0.365668772645;FOXP1:0.359432211668;FOXL1:0.357638487493;RORA:0.354980260994;HIF1A:0.350298380536;KLF4:0.343027480179;TFDP1:0.300599015649;bHLH_family:0.300309269731;PATZ1:0.292444515534;EGR1..3:0.272967860543;PRRX1,2:0.260074524099;TFAP2B:0.205804366754;SOX{8,9,10}:0.195425367975;FOXN1:0.185663539279;ZNF143:0.180341447523;MZF1:0.173619621794;MTF1:0.169551438811;STAT5{A,B}:0.155411389739;BREu{core}:0.147623256561;TLX2:0.145480100168;LHX3,4:0.118487236313;NFY{A,B,C}:0.0751596238714;SOX2:0.0740621863699;DBP:0.0708930547375;PRDM1:0.0667419540969;NKX2-2,8:0.0643411888979;IRF7:0.0486119267562;NKX3-1:0.0395140423936;NFE2L1:0.0237473421742;PAX8:0.0187644851032;MTE{core}:0.00570206143988;STAT2,4,6:0.000679199482281;HES1:-0.000954904356127;ZIC1..3:-0.0109025207419;NR3C1:-0.0121893732823;SOX17:-0.0162641877109;RFX2..5_RFXANK_RFXAP:-0.0318441442504;NHLH1,2:-0.041280738926;NFKB1_REL_RELA:-0.0468400655122;SPI1:-0.0610464534056;MED-1{core}:-0.0662626025678;POU5F1:-0.0678853144443;NKX6-1,2:-0.0756572125683;PAX6:-0.0862092446056;SPIB:-0.090391521966;HAND1,2:-0.111309214846;HOX{A5,B5}:-0.11404666908;HOXA9_MEIS1:-0.125375940153;ELK1,4_GABP{A,B1}:-0.130015367743;RREB1:-0.139585542635;HMGA1,2:-0.154241727796;NFIX:-0.177995141843;STAT1,3:-0.189899594691;NANOG{mouse}:-0.192924911044;ELF1,2,4:-0.19811834263;FOX{D1,D2}:-0.230412844764;ETS1,2:-0.23437810454;DMAP1_NCOR{1,2}_SMARC:-0.271507729799;NRF1:-0.283437408583;ZFP161:-0.292336245229;IRF1,2:-0.295162820185;REST:-0.313605763114;POU1F1:-0.322898347653;MYB:-0.333883024893;PAX1,9:-0.346356945996;RUNX1..3:-0.395251645904;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.406821000876;FOX{F1,F2,J1}:-0.412911982272;ATF5_CREB3:-0.45711517489;GZF1:-0.462704365993;ADNP_IRX_SIX_ZHX:-0.479033898152;HNF4A_NR2F1,2:-0.492685874704;ZBTB6:-0.496740336497;CREB1:-0.504040697599;AHR_ARNT_ARNT2:-0.526985816328;CUX2:-0.535586045849;ESRRA:-0.562184537495;HBP1_HMGB_SSRP1_UBTF:-0.571287701205;FOXA2:-0.573717226859;ZNF423:-0.588046353222;PPARG:-0.591619049743;RXRA_VDR{dimer}:-0.597858135725;LMO2:-0.63264245846;NR6A1:-0.65107579567;RFX1:-0.704384888664;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.715017254791;PAX4:-0.716701713052;ONECUT1,2:-0.726019364749;RXR{A,B,G}:-0.732469211594;HNF1A:-0.733406307321;GATA6:-0.745750759927;FOXM1:-0.780997455429;NFIL3:-0.804347789435;CDX1,2,4:-0.812887877986;ZBTB16:-0.826623468315;AR:-0.878066495125;FOXD3:-0.891258488935;JUN:-0.904649552749;BPTF:-0.913663067208;NR5A1,2:-0.940726501014;OCT4_SOX2{dimer}:-0.941001267233;UFEwm:-1.01446979168;PBX1:-1.23270941873;YY1:-1.29091270401;NR1H4:-1.33405805479;ARID5B:-1.39650508089;EVI1:-1.54901879254 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_mouse;search_select_hide=table111:662-22H3;search_select_hide=table117:662-22H3 | |||
}} | }} |
Latest revision as of 19:19, 4 June 2020
Name: | skin, neonate N03 |
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Species: | Mouse (Mus musculus) |
Library ID: | CNhs11215 |
Sample type: | developmental |
Genomic View: | UCSC |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
CNhs11215
0 | 0 |
1 | 0 |
10 | 0 |
100 | 0 |
1000 | 0.0804 |
1001 | 0.0374 |
1002 | -0.0566 |
1003 | 0.121 |
1004 | 0 |
1005 | 0 |
1006 | 0.0495 |
1007 | 0.0759 |
1008 | 0 |
1009 | 0.21 |
101 | 0.111 |
1010 | 0 |
1011 | 0.0254 |
1012 | 0 |
1013 | -0.058 |
1014 | 0.0836 |
1015 | -0.0122 |
1016 | 0.0979 |
1017 | 0 |
1018 | 0.467 |
1019 | 0 |
102 | 0 |
1020 | 0 |
1021 | 0.0254 |
1022 | 0.153 |
1023 | 0 |
1024 | 0.0984 |
1025 | 0 |
1026 | 0 |
1027 | 0.0113 |
1028 | 0 |
1029 | -0.0267 |
103 | 0.389 |
1030 | 0 |
1031 | 0.245 |
1032 | -0.0495 |
1033 | 0 |
1034 | 0.0495 |
1035 | 0.0254 |
1036 | 0.051 |
1037 | 0 |
1038 | 0.0376 |
1039 | -0.0756 |
104 | 0 |
1040 | 0.14 |
1041 | 0.733 |
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11215
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11215
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.235 |
10 | 10 | 0.356 |
100 | 100 | 0.975 |
101 | 101 | 0.93 |
102 | 102 | 0.818 |
103 | 103 | 0.0437 |
104 | 104 | 0.176 |
105 | 105 | 0.381 |
106 | 106 | 0.526 |
107 | 107 | 0.156 |
108 | 108 | 0.943 |
109 | 109 | 0.286 |
11 | 11 | 0.256 |
110 | 110 | 0.429 |
111 | 111 | 0.118 |
112 | 112 | 0.106 |
113 | 113 | 0.947 |
114 | 114 | 0.233 |
115 | 115 | 0.131 |
116 | 116 | 0.637 |
117 | 117 | 0.129 |
118 | 118 | 0.0177 |
119 | 119 | 0.374 |
12 | 12 | 0.497 |
120 | 120 | 0.485 |
121 | 121 | 0.446 |
122 | 122 | 0.645 |
123 | 123 | 0.726 |
124 | 124 | 0.159 |
125 | 125 | 0.533 |
126 | 126 | 0.754 |
127 | 127 | 0.352 |
128 | 128 | 0.751 |
129 | 129 | 0.433 |
13 | 13 | 0.172 |
130 | 130 | 0.666 |
131 | 131 | 0.277 |
132 | 132 | 0.569 |
133 | 133 | 0.35 |
134 | 134 | 0.806 |
135 | 135 | 0.215 |
136 | 136 | 0.204 |
137 | 137 | 0.465 |
138 | 138 | 0.394 |
139 | 139 | 0.0612 |
14 | 14 | 0.706 |
140 | 140 | 0.388 |
141 | 141 | 0.386 |
142 | 142 | 0.948 |
143 | 143 | 0.179 |
144 | 144 | 0.93 |
145 | 145 | 0.889 |
146 | 146 | 0.816 |
147 | 147 | 0.194 |
148 | 148 | 0.0936 |
149 | 149 | 0.462 |
15 | 15 | 0.0131 |
150 | 150 | 0.526 |
151 | 151 | 0.393 |
152 | 152 | 0.0195 |
153 | 153 | 0.675 |
154 | 154 | 0.609 |
155 | 155 | 0.434 |
156 | 156 | 0.345 |
157 | 157 | 0.00324 |
158 | 158 | 0.132 |
159 | 159 | 0.0794 |
160 | 160 | 0.711 |
161 | 161 | 0.2 |
162 | 162 | 0.587 |
163 | 163 | 0.764 |
164 | 164 | 0.199 |
165 | 165 | 0.273 |
166 | 166 | 0.183 |
167 | 167 | 0.00789 |
168 | 168 | 0.322 |
169 | 169 | 0.148 |
17 | 17 | 0.494 |
18 | 18 | 0.0978 |
19 | 19 | 0.763 |
2 | 2 | 0.197 |
20 | 20 | 0.141 |
21 | 21 | 0.99 |
22 | 22 | 0.869 |
23 | 23 | 0.371 |
24 | 24 | 0.971 |
25 | 25 | 0.224 |
26 | 26 | 0.0545 |
27 | 27 | 0.435 |
28 | 28 | 0.81 |
29 | 29 | 0.0583 |
3 | 3 | 0.158 |
30 | 30 | 0.0373 |
31 | 31 | 0.209 |
32 | 32 | 0.504 |
33 | 33 | 0.346 |
34 | 34 | 0.646 |
35 | 35 | 2.56414e-4 |
36 | 36 | 0.00992 |
37 | 37 | 0.769 |
38 | 38 | 0.586 |
39 | 39 | 0.272 |
4 | 4 | 0.615 |
40 | 40 | 0.223 |
41 | 41 | 0.473 |
42 | 42 | 0.694 |
43 | 43 | 0.269 |
44 | 44 | 0.0806 |
45 | 45 | 0.332 |
46 | 46 | 0.739 |
47 | 47 | 0.381 |
48 | 48 | 0.515 |
49 | 49 | 0.0414 |
5 | 5 | 0.151 |
50 | 50 | 0.571 |
51 | 51 | 0.781 |
52 | 52 | 0.139 |
53 | 53 | 0.287 |
54 | 54 | 0.885 |
55 | 55 | 0.745 |
56 | 56 | 0.719 |
57 | 57 | 0.776 |
58 | 58 | 0.833 |
59 | 59 | 0.758 |
6 | 6 | 0.977 |
60 | 60 | 0.29 |
61 | 61 | 0.998 |
62 | 62 | 0.363 |
63 | 63 | 0.921 |
64 | 64 | 0.184 |
65 | 65 | 0.329 |
66 | 66 | 0.871 |
67 | 67 | 0.985 |
68 | 68 | 0.0169 |
69 | 69 | 0.591 |
7 | 7 | 0.674 |
70 | 70 | 0.0854 |
71 | 71 | 0.527 |
72 | 72 | 0.648 |
73 | 73 | 0.499 |
74 | 74 | 0.823 |
75 | 75 | 0.0384 |
76 | 76 | 0.0012 |
77 | 77 | 0.427 |
78 | 78 | 0.0754 |
79 | 79 | 0.516 |
8 | 8 | 0.0744 |
80 | 80 | 0.22 |
81 | 81 | 0.29 |
82 | 82 | 0.271 |
83 | 83 | 0.251 |
84 | 84 | 0.61 |
85 | 85 | 0.912 |
86 | 86 | 0.232 |
87 | 87 | 0.0439 |
88 | 88 | 0.757 |
89 | 89 | 0.0963 |
9 | 9 | 0.528 |
90 | 90 | 0.186 |
91 | 91 | 0.484 |
92 | 92 | 0.394 |
93 | 93 | 0.674 |
94 | 94 | 0.673 |
95 | 95 | 0.72 |
96 | 96 | 0.622 |
97 | 97 | 0.0663 |
98 | 98 | 0.276 |
99 | 99 | 0.399 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11215
FANTOM5 (FF) ontology
Direct parent terms
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0000014 (zone of skin)
0001003 (skin epidermis)
0002097 (skin of body)
0002199 (integument)
0007029 (surface)
0000483 (epithelium)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0000064 (organ part)
0000062 (organ)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000119 (cell layer)
0003102 (surface structure)
0007376 (outer epithelium)
0010371 (ecto-epithelium)
0010317 (germ layer / neural crest derived structure)
0002416 (integumental system)
FF: FANTOM5
0000102 (sample by type)
0000101 (sample by species)
0000103 (mouse sample)
0000001 (sample)
0000004 (tissue sample)
0000303 (neonate sample - mouse)
0000311 (mouse neonate N3 sample)
0011400 (mouse skin- neonate N03 sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0010316 (germ layer / neural crest)
FF:0000294 (mouse embryonic day 11 sample)