FFCP PHASE1:Hg19::chr17:6899366..6899371,+: Difference between revisions
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|id=chr17:6899366..6899371,+
|short_description=p1@ALOX12
|description=CAGE_peak_1_at_ALOX12_5end
|association_with_transcript=-12bp_to_ENST00000251535,NM_000697,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=239 | |EntrezGene=239 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=429 | |HGNC=429 | ||
|TSSclassifier=strong | |||
|UniProt=P18054 | |UniProt=P18054 | ||
|association_with_transcript=-12bp_to_ENST00000251535,NM_000697,uc002gdx.3_5end | |||
|cluster_id=chr17:6899366..6899371,+ | |||
|coexpression_cluster_id=C31 | |||
|description=CAGE_peak_1_at_ALOX12_5end | |||
|id=chr17:6899366..6899371,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.49e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000764;2.77e-12;2!CL:0000558;2.77e-12;2!CL:0000767;1.24e-08;3!CL:0000094;4.60e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,3.12e-12,2;CL:0000765,3.12e-12,2;CL:0000050,3.12e-12,2;CL:0000038,3.12e-12,2;CL:0000558,3.12e-12,2;CL:0000547,3.12e-12,2;CL:0000549,3.12e-12,2;CL:0000550,3.12e-12,2;CL:0000552,3.12e-12,2;CL:0000767,1.34e-08,3;CL:0000094,5.07e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.20e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1749;8.88e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,9.39e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000178!3.46e-16!15;UBERON:0000179!3.46e-16!15;UBERON:0000463!3.46e-16!15;UBERON:0000473!6.63e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.72e-31;15!UBERON:0000179;3.72e-31;15!UBERON:0000463;3.72e-31;15!UBERON:0002390;7.14e-16;32!UBERON:0002193;5.49e-10;42!UBERON:0001723;2.13e-09;3!UBERON:0001033;2.13e-09;3!UBERON:0005795;1.06e-07;1!UBERON:0002372;1.69e-07;1!UBERON:0001961;1.69e-07;1!UBERON:0001744;1.69e-07;1!UBERON:0001042;1.69e-07;1!UBERON:0001735;1.69e-07;1!UBERON:0006834;3.31e-07;1!UBERON:0000997;5.67e-07;1!UBERON:0005056;5.67e-07;1!UBERON:0004176;5.67e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.17e-31,15;UBERON:0000179,3.17e-31,15;UBERON:0000463,3.17e-31,15;UBERON:0007023,1.25e-11,114;UBERON:0001723,2.13e-09,3;UBERON:0001033,2.13e-09,3;UBERON:0010056,2.13e-09,3;UBERON:0002372,1.63e-07,1;UBERON:0001961,1.63e-07,1;UBERON:0001744,1.63e-07,1;UBERON:0001735,1.63e-07,1;UBERON:0006834,3.41e-07,1;UBERON:0000997,4.60e-07,1;UBERON:0005056,4.60e-07,1;UBERON:0000166,9.28e-07,22 | |||
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| 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| ||
|short_description=p1@ALOX12 | |||
}} | }} |
Latest revision as of 02:40, 17 September 2015
Short description: | p1@ALOX12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ALOX12_5end |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | -12bp_to_ENST00000251535, NM_000697, uc002gdx.3_5end |
EntrezGene: | ALOX12 |
HGNC: | 429 |
UniProt: | P18054 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 3.12e-12 | 2 |
erythroblast | 3.12e-12 | 2 |
megakaryocyte-erythroid progenitor cell | 3.12e-12 | 2 |
erythroid progenitor cell | 3.12e-12 | 2 |
reticulocyte | 3.12e-12 | 2 |
proerythroblast | 3.12e-12 | 2 |
basophilic erythroblast | 3.12e-12 | 2 |
polychromatophilic erythroblast | 3.12e-12 | 2 |
orthochromatic erythroblast | 3.12e-12 | 2 |
basophil | 1.34e-08 | 3 |
granulocyte | 5.07e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
blood | 3.17e-31 | 15 |
haemolymphatic fluid | 3.17e-31 | 15 |
organism substance | 3.17e-31 | 15 |
adult organism | 1.25e-11 | 114 |
tongue | 2.13e-09 | 3 |
gustatory system | 2.13e-09 | 3 |
future tongue | 2.13e-09 | 3 |
tonsil | 1.63e-07 | 1 |
mucosa-associated lymphoid tissue | 1.63e-07 | 1 |
lymphoid tissue | 1.63e-07 | 1 |
tonsillar ring | 1.63e-07 | 1 |
uterus or analog | 3.41e-07 | 1 |
mammalian vulva | 4.60e-07 | 1 |
external female genitalia | 4.60e-07 | 1 |
oral opening | 9.28e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 9.39e-07 | 14 |