FFCP PHASE1:Hg19::chr17:68131022..68131042,+: Difference between revisions
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|id=chr17:68131022..68131042,+
|short_description=p@chr17:68131022..68131042,+
|description=CAGE_peak_at_chr17:68131022..68131042,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:68131022..68131042,+ | |||
|coexpression_cluster_id=C835 | |||
|description=CAGE_peak_at_chr17:68131022..68131042,+ | |||
|id=chr17:68131022..68131042,+ | |||
|ontology_enrichment_celltype=CL:0002541!3.94e-08!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.41e-28;3!UBERON:0003057;1.41e-28;3!UBERON:0007297;3.49e-20;2!UBERON:0005754;3.08e-11;1!UBERON:0006222;1.05e-10;1!UBERON:0003918;2.68e-09;10!UBERON:0007687;2.68e-09;10!UBERON:0007123;1.16e-08;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p@chr17:68131022..68131042,+ | |||
}} | }} |
Latest revision as of 20:24, 25 July 2015
Short description: | p@chr17:68131022..68131042, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:68131022..68131042, + |
Coexpression cluster: | C835_kidney_thyroid_mesothelioma_throat_salivary_seminal_chorionic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 2.40e-29 | 3 |
internal male genitalia | 2.40e-29 | 3 |
spinal cord | 1.01e-28 | 3 |
dorsal region element | 1.01e-28 | 3 |
dorsum | 1.01e-28 | 3 |
duct of male reproductive system | 3.47e-22 | 4 |
posterior neural tube | 9.55e-16 | 15 |
chordal neural plate | 9.55e-16 | 15 |
cavitated compound organ | 2.74e-14 | 31 |
vas deferens | 3.08e-11 | 1 |
spermatic cord | 3.08e-11 | 1 |
seminal vesicle | 3.41e-11 | 1 |
seminal fluid secreting gland | 3.41e-11 | 1 |
epididymis | 1.77e-10 | 1 |
thyroid gland | 1.01e-08 | 5 |
pharyngeal pouch | 1.01e-08 | 5 |
thyroid diverticulum | 1.01e-08 | 5 |
pharyngeal pouch 2 | 1.01e-08 | 5 |
thyroid primordium | 1.01e-08 | 5 |
adult organism | 1.94e-08 | 114 |
male reproductive organ | 2.00e-08 | 11 |
neural tube | 2.12e-07 | 56 |
neural rod | 2.12e-07 | 56 |
future spinal cord | 2.12e-07 | 56 |
neural keel | 2.12e-07 | 56 |
brainstem | 2.23e-07 | 6 |