FFCP PHASE1:Hg19::chr3:106569465..106569481,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:106569465..106569481,- | |||
|description=CAGE_peak_at_chr3:106569465..106569481,- | |description=CAGE_peak_at_chr3:106569465..106569481,- | ||
|id=chr3:106569465..106569481,- | |id=chr3:106569465..106569481,- | ||
|ontology_enrichment_celltype=CL:0000055!5.84e-29!180;CL:0000359!3.78e-21!32;CL:0000680!2.40e-17!57;CL:0000056!2.40e-17!57;CL:0000355!2.40e-17!57;CL:0000192!7.16e-17!42;CL:0000514!7.16e-17!42;CL:0000187!3.79e-15!54;CL:0000183!2.06e-13!59;CL:0000393!4.22e-13!60;CL:0000211!4.22e-13!60;CL:1000306!3.29e-12!4;CL:0002547!3.29e-12!4;CL:0000057!7.78e-11!75;CL:0000048!2.25e-10!430;CL:0000723!5.00e-10!436;CL:0002539!6.76e-10!10;CL:0002595!1.35e-09!5;CL:0000034!1.40e-09!444;CL:0000222!1.11e-08!119;CL:0002540!6.89e-08!6;CL:0002092!4.79e-07!10;CL:0002620!4.79e-07!23;CL:0002593!7.27e-07!2;CL:0002589!7.69e-07!2 | |ontology_enrichment_celltype=CL:0000055!5.84e-29!180;CL:0000359!3.78e-21!32;CL:0000680!2.40e-17!57;CL:0000056!2.40e-17!57;CL:0000355!2.40e-17!57;CL:0000192!7.16e-17!42;CL:0000514!7.16e-17!42;CL:0000187!3.79e-15!54;CL:0000183!2.06e-13!59;CL:0000393!4.22e-13!60;CL:0000211!4.22e-13!60;CL:1000306!3.29e-12!4;CL:0002547!3.29e-12!4;CL:0000057!7.78e-11!75;CL:0000048!2.25e-10!430;CL:0000723!5.00e-10!436;CL:0002539!6.76e-10!10;CL:0002595!1.35e-09!5;CL:0000034!1.40e-09!444;CL:0000222!1.11e-08!119;CL:0002540!6.89e-08!6;CL:0002092!4.79e-07!10;CL:0002620!4.79e-07!23;CL:0002593!7.27e-07!2;CL:0002589!7.69e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:1000306;2.12e-27;4!CL:0002547;2.12e-27;4!CL:0000359;7.01e-22;32!CL:0002595;1.44e-21;5!CL:0002539;1.35e-16;10!CL:0000192;4.14e-15;43!CL:0002593;1.28e-14;2!CL:0002589;2.13e-14;2!CL:0002092;3.02e-11;10!CL:0002540;7.01e-11;6!CL:0000187;5.08e-08;55!CL:0000511;7.09e-08;1!CL:0002625;7.09e-08;1!CL:0000216;7.09e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,2.36e-27,4;CL:0002547,2.36e-27,4;CL:0000359,2.74e-23,32;CL:0002595,1.45e-21,5;CL:0000192,7.88e-17,43;CL:0000514,7.88e-17,43;CL:0002539,9.75e-17,10;CL:0002593,2.06e-14,2;CL:0002589,2.36e-14,2;CL:0000187,9.92e-13,55;CL:0000680,5.70e-12,58;CL:0000056,5.70e-12,58;CL:0000355,5.70e-12,58;CL:0000393,2.76e-11,61;CL:0000211,2.76e-11,61;CL:0002092,3.45e-11,10;CL:0002540,7.90e-11,6;CL:0000511,5.40e-08,1;CL:0002625,5.40e-08,1;CL:0000216,5.40e-08,1;CL:0000222,6.67e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;4.14e-15;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3571;2.27e-08;1!DOID:4235;7.09e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,2.04e-08,1;DOID:4235,7.10e-08,1 | |||
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|short_description=p@chr3:106569465..106569481,- | |short_description=p@chr3:106569465..106569481,- | ||
}} | }} |
Latest revision as of 13:59, 29 July 2015
Short description: | p@chr3:106569465..106569481, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:106569465..106569481, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 2.36e-27 | 4 |
fibroblast of the aortic adventitia | 2.36e-27 | 4 |
vascular associated smooth muscle cell | 2.74e-23 | 32 |
smooth muscle cell of the subclavian artery | 1.45e-21 | 5 |
smooth muscle cell | 7.88e-17 | 43 |
smooth muscle myoblast | 7.88e-17 | 43 |
aortic smooth muscle cell | 9.75e-17 | 10 |
smooth muscle cell of the internal thoracic artery | 2.06e-14 | 2 |
smooth muscle cell of the brachiocephalic vasculature | 2.36e-14 | 2 |
muscle cell | 9.92e-13 | 55 |
muscle precursor cell | 5.70e-12 | 58 |
myoblast | 5.70e-12 | 58 |
multi-potent skeletal muscle stem cell | 5.70e-12 | 58 |
electrically responsive cell | 2.76e-11 | 61 |
electrically active cell | 2.76e-11 | 61 |
bone marrow cell | 3.45e-11 | 10 |
mesenchymal stem cell of the bone marrow | 7.90e-11 | 6 |
androgen binding protein secreting cell | 5.40e-08 | 1 |
seminiferous tubule epithelial cell | 5.40e-08 | 1 |
Sertoli cell | 5.40e-08 | 1 |
mesodermal cell | 6.67e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 2.04e-08 | 1 |
spindle cell sarcoma | 7.10e-08 | 1 |