FFCP PHASE1:Hg19::chr2:127851314..127851361,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:127851314..127851361,- | |||
|coexpression_cluster_id=C430 | |||
|description=CAGE_peak_at_chr2:127851314..127851361,- | |description=CAGE_peak_at_chr2:127851314..127851361,- | ||
|id=chr2:127851314..127851361,- | |id=chr2:127851314..127851361,- | ||
|ontology_enrichment_celltype=CL:0002139!2.62e-14!24;CL:0000115!6.11e-13!35;CL:0002144!2.44e-11!3;CL:0002078!1.08e-09!44;CL:0005020!5.62e-09!6;CL:0002138!5.62e-09!6;CL:0005022!5.62e-09!6;CL:0000071!4.68e-08!18;CL:0002546!4.68e-08!18;CL:0000213!7.61e-07!57;CL:0000215!7.61e-07!57 | |ontology_enrichment_celltype=CL:0002139!2.62e-14!24;CL:0000115!6.11e-13!35;CL:0002144!2.44e-11!3;CL:0002078!1.08e-09!44;CL:0005020!5.62e-09!6;CL:0002138!5.62e-09!6;CL:0005022!5.62e-09!6;CL:0000071!4.68e-08!18;CL:0002546!4.68e-08!18;CL:0000213!7.61e-07!57;CL:0000215!7.61e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0000037;4.44e-18;1!CL:0001024;4.44e-18;1!CL:0002144;8.86e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0001024,4.44e-18,1;CL:0002144,9.12e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0004872;2.35e-10;7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:8692;1.29e-18;31!DOID:9119;9.48e-18;1!DOID:1240;7.59e-13;39!DOID:2531;1.54e-10;51!DOID:0060083;1.54e-10;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.73e-19,31;DOID:9119,7.37e-18,1;DOID:1240,3.35e-15,39;DOID:2531,1.38e-11,51;DOID:0060083,1.38e-11,51 | |||
|ontology_enrichment_uberon=UBERON:0001915!2.44e-11!3;UBERON:0001982!2.44e-11!3;UBERON:0001986!4.68e-08!18;UBERON:0004638!4.68e-08!18;UBERON:0004852!4.68e-08!18;UBERON:0004177!5.52e-08!7;UBERON:0002465!8.16e-08!10;UBERON:0001473!9.89e-07!8;UBERON:0004536!9.89e-07!8;UBERON:0006558!9.89e-07!8 | |ontology_enrichment_uberon=UBERON:0001915!2.44e-11!3;UBERON:0001982!2.44e-11!3;UBERON:0001986!4.68e-08!18;UBERON:0004638!4.68e-08!18;UBERON:0004852!4.68e-08!18;UBERON:0004177!5.52e-08!7;UBERON:0002465!8.16e-08!10;UBERON:0001473!9.89e-07!8;UBERON:0004536!9.89e-07!8;UBERON:0006558!9.89e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;8.03e-23;3!UBERON:0004177;4.11e-14;5!UBERON:0005057;4.11e-14;5!UBERON:0010523;8.86e-07;3!UBERON:0001915;8.86e-07;3!UBERON:0001982;8.86e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,8.04e-23,3;UBERON:0004854,8.04e-23,3;UBERON:0009034,8.04e-23,3;UBERON:0002095,8.04e-23,3;UBERON:0004782,8.04e-23,3;UBERON:0003281,8.04e-23,3;UBERON:0009664,8.04e-23,3;UBERON:0002296,8.04e-23,3;UBERON:0005602,8.04e-23,3;UBERON:0001179,8.04e-23,3;UBERON:0006293,8.04e-23,3;UBERON:0004177,2.35e-10,7;UBERON:0005057,2.35e-10,7;UBERON:0000945,3.55e-09,8;UBERON:0010039,3.55e-09,8;UBERON:0010523,9.12e-07,3;UBERON:0001915,9.12e-07,3;UBERON:0001982,9.12e-07,3 | |||
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| ||
|short_description=p@chr2:127851314..127851361,- | |short_description=p@chr2:127851314..127851361,- | ||
}} | }} |
Latest revision as of 00:05, 29 July 2015
Short description: | p@chr2:127851314..127851361, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:127851314..127851361, - |
Coexpression cluster: | C430_acute_giant_chronic_CD34_CD133_melanoma_skeletal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD34-positive, CD38-negative hematopoietic stem cell | 4.44e-18 | 1 |
capillary endothelial cell | 9.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
spleen | 8.04e-23 | 3 |
gastrointestinal system mesentery | 8.04e-23 | 3 |
stomach region | 8.04e-23 | 3 |
mesentery | 8.04e-23 | 3 |
gastrointestinal system serosa | 8.04e-23 | 3 |
mesentery of stomach | 8.04e-23 | 3 |
gut mesentery | 8.04e-23 | 3 |
dorsal mesentery | 8.04e-23 | 3 |
dorsal mesogastrium | 8.04e-23 | 3 |
peritoneal cavity | 8.04e-23 | 3 |
spleen primordium | 8.04e-23 | 3 |
hemopoietic organ | 2.35e-10 | 7 |
immune organ | 2.35e-10 | 7 |
stomach | 3.55e-09 | 8 |
food storage organ | 3.55e-09 | 8 |
microcirculatory vessel | 9.12e-07 | 3 |
endothelium of capillary | 9.12e-07 | 3 |
capillary | 9.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.73e-19 | 31 |
acute myeloid leukemia | 7.37e-18 | 1 |
leukemia | 3.35e-15 | 39 |
hematologic cancer | 1.38e-11 | 51 |
immune system cancer | 1.38e-11 | 51 |