FFCP PHASE1:Hg19::chr20:62679771..62679782,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54345 | |EntrezGene=54345 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11194 | |HGNC=11194 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-321bp_to_AF086136_5end | |association_with_transcript=-321bp_to_AF086136_5end | ||
|cluster_id=chr20:62679771..62679782,- | |||
|coexpression_cluster_id=C357 | |||
|description=CAGE_peak_4_at_SOX18_5end | |description=CAGE_peak_4_at_SOX18_5end | ||
|id=chr20:62679771..62679782,- | |id=chr20:62679771..62679782,- | ||
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|ontology_enrichment_celltype_v019=CL:0002144;5.00e-67;3!CL:0002139;1.02e-44;24!CL:0000071;4.93e-44;18!CL:0000115;1.49e-30;36!CL:0002078;5.20e-24;45!CL:0002545;2.19e-12;2!CL:0000213;6.09e-12;58!CL:0000215;6.09e-12;58!CL:1000413;8.37e-11;9!CL:0000076;1.28e-08;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0002144,5.01e-67,3;CL:0002139,1.09e-44,24;CL:0000071,5.51e-44,18;CL:0002546,5.51e-44,18;CL:0000115,7.95e-39,36;CL:0002078,4.54e-31,45;CL:0000213,4.21e-24,58;CL:0000215,4.21e-24,58;CL:0000076,1.16e-12,63;CL:0002545,2.07e-12,2;CL:0000222,1.78e-11,121;CL:1000413,8.37e-11,9 | |||
|ontology_enrichment_development_v019=CL:0002546;4.93e-44;18!CL:0000222;4.10e-07;121 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p4@SOX18 | |short_description=p4@SOX18 | ||
}} | }} |
Latest revision as of 15:11, 17 September 2015
Short description: | p4@SOX18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SOX18_5end |
Coexpression cluster: | C357_Endothelial_Lymphatic_Renal_Hepatic_seminal_breast_heart |
Association with transcript: | -321bp_to_AF086136_5end |
EntrezGene: | SOX18 |
HGNC: | 11194 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 5.01e-67 | 3 |
endothelial cell of vascular tree | 1.09e-44 | 24 |
blood vessel endothelial cell | 5.51e-44 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.51e-44 | 18 |
endothelial cell | 7.95e-39 | 36 |
meso-epithelial cell | 4.54e-31 | 45 |
lining cell | 4.21e-24 | 58 |
barrier cell | 4.21e-24 | 58 |
squamous epithelial cell | 1.16e-12 | 63 |
thoracic aorta endothelial cell | 2.07e-12 | 2 |
mesodermal cell | 1.78e-11 | 121 |
endothelial cell of artery | 8.37e-11 | 9 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 5.01e-67 | 3 |
endothelium of capillary | 5.01e-67 | 3 |
capillary | 5.01e-67 | 3 |
blood vessel endothelium | 5.51e-44 | 18 |
endothelium | 5.51e-44 | 18 |
cardiovascular system endothelium | 5.51e-44 | 18 |
simple squamous epithelium | 4.88e-36 | 22 |
squamous epithelium | 9.64e-32 | 25 |
lower lobe of right lung | 5.13e-23 | 1 |
right lung lobe | 5.13e-23 | 1 |
lower lobe of lung | 5.13e-23 | 1 |
lobe of lung | 5.13e-23 | 1 |
right lung | 5.13e-23 | 1 |
vessel | 8.50e-16 | 68 |
vasculature | 9.23e-14 | 78 |
vascular system | 9.23e-14 | 78 |
epithelial tube open at both ends | 1.62e-13 | 59 |
blood vessel | 1.62e-13 | 59 |
blood vasculature | 1.62e-13 | 59 |
vascular cord | 1.62e-13 | 59 |
segment of aorta | 2.07e-12 | 2 |
thoracic aorta | 2.07e-12 | 2 |
endothelial tube | 8.37e-11 | 9 |
arterial system endothelium | 8.37e-11 | 9 |
endothelium of artery | 8.37e-11 | 9 |
cardiovascular system | 8.31e-10 | 109 |
splanchnic layer of lateral plate mesoderm | 1.32e-09 | 83 |
circulatory system | 1.54e-09 | 112 |
epithelial tube | 3.96e-09 | 117 |
anatomical conduit | 3.89e-07 | 240 |
tube | 4.48e-07 | 192 |