FFCP PHASE1:Hg19::chr20:5903646..5903656,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:5903646..5903656,+ | |||
|coexpression_cluster_id=C377 | |||
|description=CAGE_peak_at_chr20:5903646..5903656,+ | |description=CAGE_peak_at_chr20:5903646..5903656,+ | ||
|id=chr20:5903646..5903656,+ | |id=chr20:5903646..5903656,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.19e-38;3 | |||
|ontology_enrichment_disease=DOID:3119!2.18e-08!14 | |ontology_enrichment_disease=DOID:3119!2.18e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:3119;3.72e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,3.72e-09,14 | |||
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|short_description=p@chr20:5903646..5903656,+ | |short_description=p@chr20:5903646..5903656,+ | ||
}} | }} |
Latest revision as of 16:01, 28 July 2015
Short description: | p@chr20:5903646..5903656, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:5903646..5903656, + |
Coexpression cluster: | C377_pituitary_small_smallcell_cerebellum_pineal_pons_neuroblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pituitary gland | 4.77e-57 | 2 |
gland of diencephalon | 3.65e-29 | 4 |
neuroendocrine gland | 3.65e-29 | 4 |
regional part of metencephalon | 9.98e-29 | 9 |
metencephalon | 9.98e-29 | 9 |
future metencephalon | 9.98e-29 | 9 |
segmental subdivision of hindbrain | 9.03e-22 | 12 |
hindbrain | 9.03e-22 | 12 |
presumptive hindbrain | 9.03e-22 | 12 |
segmental subdivision of nervous system | 3.67e-20 | 13 |
cerebellum | 8.63e-20 | 6 |
rhombic lip | 8.63e-20 | 6 |
posterior neural tube | 1.38e-17 | 15 |
chordal neural plate | 1.38e-17 | 15 |
diencephalon | 3.71e-17 | 7 |
future diencephalon | 3.71e-17 | 7 |
regional part of nervous system | 2.12e-13 | 53 |
regional part of brain | 2.12e-13 | 53 |
neural tube | 1.03e-12 | 56 |
neural rod | 1.03e-12 | 56 |
future spinal cord | 1.03e-12 | 56 |
neural keel | 1.03e-12 | 56 |
pons | 1.20e-10 | 3 |
brain | 2.05e-10 | 68 |
future brain | 2.05e-10 | 68 |
central nervous system | 7.91e-09 | 81 |
neural plate | 7.91e-09 | 82 |
presumptive neural plate | 7.91e-09 | 82 |
neurectoderm | 1.96e-08 | 86 |
nervous system | 5.46e-08 | 89 |
ecto-epithelium | 4.99e-07 | 104 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 3.72e-09 | 14 |