FFCP PHASE1:Hg19::chr20:19955957..19956029,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54453 | |EntrezGene=54453 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=18750 | |HGNC=18750 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WYP3 | |UniProt=Q8WYP3 | ||
|association_with_transcript=15bp_to_M37190_5end | |association_with_transcript=15bp_to_M37190_5end | ||
|cluster_id=chr20:19955957..19956029,+ | |||
|description=CAGE_peak_2_at_RIN2_5end | |description=CAGE_peak_2_at_RIN2_5end | ||
|id=chr20:19955957..19956029,+ | |id=chr20:19955957..19956029,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.38e-09!180;CL:0000057!1.47e-09!75;CL:0002076!1.90e-09!43;CL:0000680!5.15e-09!57;CL:0000056!5.15e-09!57;CL:0000355!5.15e-09!57;CL:0000192!1.20e-08!42;CL:0000514!1.20e-08!42;CL:0002194!1.41e-08!63;CL:0000576!1.41e-08!63;CL:0000040!1.41e-08!63;CL:0000559!1.41e-08!63;CL:0000359!1.78e-08!32;CL:0000187!1.98e-08!54;CL:0002009!4.31e-08!65;CL:0000183!3.31e-07!59;CL:0000548!5.50e-07!679;CL:0000004!5.50e-07!679;CL:0000255!5.50e-07!679;CL:0000220!7.18e-07!246 | |ontology_enrichment_celltype=CL:0000055!1.38e-09!180;CL:0000057!1.47e-09!75;CL:0002076!1.90e-09!43;CL:0000680!5.15e-09!57;CL:0000056!5.15e-09!57;CL:0000355!5.15e-09!57;CL:0000192!1.20e-08!42;CL:0000514!1.20e-08!42;CL:0002194!1.41e-08!63;CL:0000576!1.41e-08!63;CL:0000040!1.41e-08!63;CL:0000559!1.41e-08!63;CL:0000359!1.78e-08!32;CL:0000187!1.98e-08!54;CL:0002009!4.31e-08!65;CL:0000183!3.31e-07!59;CL:0000548!5.50e-07!679;CL:0000004!5.50e-07!679;CL:0000255!5.50e-07!679;CL:0000220!7.18e-07!246 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.25e-08;39!CL:0000234;1.25e-08;39!CL:0000359;3.73e-08;32!CL:0002076;9.86e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,9.05e-10,59;CL:0000576,9.05e-10,59;CL:0000040,9.05e-10,59;CL:0000559,9.05e-10,59;CL:0000057,1.39e-09,76;CL:0000680,3.60e-09,58;CL:0000056,3.60e-09,58;CL:0000355,3.60e-09,58;CL:0002009,4.70e-09,61;CL:0000192,9.13e-09,43;CL:0000514,9.13e-09,43;CL:0000473,9.87e-09,48;CL:0000234,9.87e-09,48;CL:0002076,1.10e-08,42;CL:0000359,1.18e-08,32;CL:0000187,1.43e-08,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.06e-07!14 | |ontology_enrichment_disease=DOID:2394!2.06e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.38e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.45e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000467!4.72e-19!625;UBERON:0000468!4.81e-19!659;UBERON:0000480!6.29e-19!626;UBERON:0000923!1.54e-15!604;UBERON:0005291!1.54e-15!604;UBERON:0006598!1.54e-15!604;UBERON:0002532!1.54e-15!604;UBERON:0002050!2.06e-15!605;UBERON:0005423!2.06e-15!605;UBERON:0000062!3.48e-15!511;UBERON:0003102!4.34e-15!95;UBERON:0002204!7.68e-15!167;UBERON:0000926!1.87e-14!448;UBERON:0004120!1.87e-14!448;UBERON:0006603!1.87e-14!448;UBERON:0000922!1.02e-13!612;UBERON:0000486!1.14e-12!82;UBERON:0000914!1.38e-12!83;UBERON:0002329!1.38e-12!83;UBERON:0003077!1.38e-12!83;UBERON:0003059!1.38e-12!83;UBERON:0007282!1.38e-12!83;UBERON:0009618!1.38e-12!83;UBERON:0007285!1.38e-12!83;UBERON:0004290!4.46e-10!70;UBERON:0000475!1.51e-09!365;UBERON:0001134!2.05e-08!61;UBERON:0002036!2.05e-08!61;UBERON:0003082!2.05e-08!61;UBERON:0000161!4.06e-08!35;UBERON:0002385!5.90e-08!63;UBERON:0001015!5.90e-08!63;UBERON:0000383!5.90e-08!63;UBERON:0000165!7.31e-08!28;UBERON:0000930!7.31e-08!28;UBERON:0005256!1.21e-07!143;UBERON:0002097!3.14e-07!40;UBERON:0000166!3.60e-07!21;UBERON:0002100!3.63e-07!216;UBERON:0002199!5.25e-07!45;UBERON:0002416!5.25e-07!45;UBERON:0003104!7.11e-07!238;UBERON:0009142!7.11e-07!238;UBERON:0000481!9.00e-07!347 | |ontology_enrichment_uberon=UBERON:0000467!4.72e-19!625;UBERON:0000468!4.81e-19!659;UBERON:0000480!6.29e-19!626;UBERON:0000923!1.54e-15!604;UBERON:0005291!1.54e-15!604;UBERON:0006598!1.54e-15!604;UBERON:0002532!1.54e-15!604;UBERON:0002050!2.06e-15!605;UBERON:0005423!2.06e-15!605;UBERON:0000062!3.48e-15!511;UBERON:0003102!4.34e-15!95;UBERON:0002204!7.68e-15!167;UBERON:0000926!1.87e-14!448;UBERON:0004120!1.87e-14!448;UBERON:0006603!1.87e-14!448;UBERON:0000922!1.02e-13!612;UBERON:0000486!1.14e-12!82;UBERON:0000914!1.38e-12!83;UBERON:0002329!1.38e-12!83;UBERON:0003077!1.38e-12!83;UBERON:0003059!1.38e-12!83;UBERON:0007282!1.38e-12!83;UBERON:0009618!1.38e-12!83;UBERON:0007285!1.38e-12!83;UBERON:0004290!4.46e-10!70;UBERON:0000475!1.51e-09!365;UBERON:0001134!2.05e-08!61;UBERON:0002036!2.05e-08!61;UBERON:0003082!2.05e-08!61;UBERON:0000161!4.06e-08!35;UBERON:0002385!5.90e-08!63;UBERON:0001015!5.90e-08!63;UBERON:0000383!5.90e-08!63;UBERON:0000165!7.31e-08!28;UBERON:0000930!7.31e-08!28;UBERON:0005256!1.21e-07!143;UBERON:0002097!3.14e-07!40;UBERON:0000166!3.60e-07!21;UBERON:0002100!3.63e-07!216;UBERON:0002199!5.25e-07!45;UBERON:0002416!5.25e-07!45;UBERON:0003104!7.11e-07!238;UBERON:0009142!7.11e-07!238;UBERON:0000481!9.00e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0000165;4.64e-08;28!UBERON:0000161;2.17e-07;19!UBERON:0000166;2.17e-07;19 | |||
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| ||
|short_description=p2@RIN2 | |short_description=p2@RIN2 | ||
}} | }} |
Latest revision as of 16:44, 24 September 2015
Short description: | p2@RIN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RIN2_5end |
Coexpression cluster: | NA |
Association with transcript: | 15bp_to_M37190_5end |
EntrezGene: | RIN2 |
HGNC: | 18750 |
UniProt: | Q8WYP3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 9.05e-10 | 59 |
monocyte | 9.05e-10 | 59 |
monoblast | 9.05e-10 | 59 |
promonocyte | 9.05e-10 | 59 |
fibroblast | 1.39e-09 | 76 |
muscle precursor cell | 3.60e-09 | 58 |
myoblast | 3.60e-09 | 58 |
multi-potent skeletal muscle stem cell | 3.60e-09 | 58 |
macrophage dendritic cell progenitor | 4.70e-09 | 61 |
smooth muscle cell | 9.13e-09 | 43 |
smooth muscle myoblast | 9.13e-09 | 43 |
defensive cell | 9.87e-09 | 48 |
phagocyte | 9.87e-09 | 48 |
endo-epithelial cell | 1.10e-08 | 42 |
vascular associated smooth muscle cell | 1.18e-08 | 32 |
muscle cell | 1.43e-08 | 55 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.45e-07 | 14 |