FFCP PHASE1:Hg19::chr1:94520868..94520897,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:94520868..94520897,- | |||
|description=CAGE_peak_at_chr1:94520868..94520897,- | |description=CAGE_peak_at_chr1:94520868..94520897,- | ||
|id=chr1:94520868..94520897,- | |id=chr1:94520868..94520897,- | ||
|ontology_enrichment_celltype=CL:0002322!6.28e-09!5;CL:0002149!6.83e-08!6;CL:0002255!6.83e-08!6;CL:0000039!4.90e-07!7;CL:0000586!4.90e-07!7 | |ontology_enrichment_celltype=CL:0002322!6.28e-09!5;CL:0002149!6.83e-08!6;CL:0002255!6.83e-08!6;CL:0000039!4.90e-07!7;CL:0000586!4.90e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0000039;5.69e-22;7!CL:0000586;5.69e-22;7!CL:0002149;4.55e-12;6!CL:0002255;4.55e-12;6!CL:0000322;9.12e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,5.69e-22,7;CL:0000586,5.69e-22,7;CL:0002149,4.55e-12,6;CL:0002255,4.55e-12,6;CL:0000322,9.12e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.36e-15;10!UBERON:0005564;1.36e-15;10!UBERON:0007297;9.46e-10;2!UBERON:0006603;2.62e-07;65 | |||
|ontology_enrichment_disease=DOID:3001!6.83e-08!6 | |ontology_enrichment_disease=DOID:3001!6.83e-08!6 | ||
|ontology_enrichment_disease_v019=DOID:3371;4.44e-18;1!DOID:4549;4.44e-18;1!DOID:5861;4.44e-18;1!DOID:6496;4.44e-18;1!DOID:3001;4.55e-12;6!DOID:3910;1.57e-09;2!DOID:3095;2.07e-07;22!DOID:2994;2.07e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,4.44e-18,1;DOID:4549,4.44e-18,1;DOID:5861,4.44e-18,1;DOID:6496,4.44e-18,1;DOID:3001,4.55e-12,6;DOID:3910,1.57e-09,2;DOID:0050687,1.08e-08,143;DOID:3095,2.07e-07,22;DOID:2994,2.07e-07,22;DOID:305,2.78e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0003135!2.08e-21!11;UBERON:0003101!1.95e-16!22;UBERON:0000079!1.95e-16!22;UBERON:0000473!2.01e-15!8;UBERON:0005156!3.78e-11!59;UBERON:0000990!3.78e-11!59;UBERON:0003133!3.12e-10!48;UBERON:0000991!6.56e-08!21;UBERON:0009196!6.56e-08!21;UBERON:0009117!6.56e-08!21;UBERON:0005564!6.56e-08!21;UBERON:0006947!1.11e-07!3;UBERON:0004054!1.11e-07!3;UBERON:0004176!1.61e-07!22 | |ontology_enrichment_uberon=UBERON:0003135!2.08e-21!11;UBERON:0003101!1.95e-16!22;UBERON:0000079!1.95e-16!22;UBERON:0000473!2.01e-15!8;UBERON:0005156!3.78e-11!59;UBERON:0000990!3.78e-11!59;UBERON:0003133!3.12e-10!48;UBERON:0000991!6.56e-08!21;UBERON:0009196!6.56e-08!21;UBERON:0009117!6.56e-08!21;UBERON:0005564!6.56e-08!21;UBERON:0006947!1.11e-07!3;UBERON:0004054!1.11e-07!3;UBERON:0004176!1.61e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0003135;1.48e-37;11!UBERON:0006947;5.76e-23;3!UBERON:0004054;5.76e-23;3!UBERON:0000473;2.57e-19;8!UBERON:0003101;6.98e-19;22!UBERON:0000079;6.98e-19;22!UBERON:0001301;3.75e-18;1!UBERON:0001000;1.44e-17;1!UBERON:0005352;1.44e-17;1!UBERON:0005904;1.71e-17;4!UBERON:0000058;1.83e-15;10!UBERON:0004175;5.78e-13;21!UBERON:0003133;3.23e-12;44!UBERON:0004903;1.57e-09;2!UBERON:0002173;1.57e-09;2!UBERON:0002186;1.57e-09;2!UBERON:0000991;9.73e-08;21!UBERON:0005156;3.54e-07;59!UBERON:0000990;3.54e-07;59!UBERON:0002418;6.88e-07;3!UBERON:0004755;6.88e-07;3!UBERON:0004821;9.12e-07;3!UBERON:0007499;9.12e-07;3!UBERON:0003215;9.12e-07;3!UBERON:0010368;9.12e-07;3!UBERON:0009911;9.12e-07;3!UBERON:0002299;9.12e-07;3!UBERON:0006524;9.12e-07;3!UBERON:0008874;9.12e-07;3!UBERON:0002169;9.12e-07;3!UBERON:0004894;9.12e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,1.38e-37,11;UBERON:0006947,5.15e-23,3;UBERON:0004054,5.15e-23,3;UBERON:0000473,2.57e-19,8;UBERON:0003101,6.72e-19,22;UBERON:0000079,6.72e-19,22;UBERON:0001301,3.75e-18,1;UBERON:0001000,1.22e-17,1;UBERON:0005352,1.22e-17,1;UBERON:0005904,1.57e-17,4;UBERON:0003133,1.47e-16,48;UBERON:0005156,2.09e-13,59;UBERON:0000990,2.09e-13,59;UBERON:0004175,5.93e-11,25;UBERON:0004903,1.57e-09,2;UBERON:0002173,1.57e-09,2;UBERON:0002186,1.57e-09,2;UBERON:0000058,1.93e-08,19;UBERON:0000991,9.73e-08,21;UBERON:0009196,9.73e-08,21;UBERON:0009117,9.73e-08,21;UBERON:0005564,9.73e-08,21;UBERON:0004176,2.07e-07,22;UBERON:0002418,6.88e-07,3;UBERON:0004755,6.88e-07,3;UBERON:0004821,9.12e-07,3;UBERON:0003215,9.12e-07,3;UBERON:0010368,9.12e-07,3;UBERON:0009911,9.12e-07,3;UBERON:0002299,9.12e-07,3;UBERON:0006524,9.12e-07,3;UBERON:0008874,9.12e-07,3;UBERON:0002169,9.12e-07,3;UBERON:0004894,9.12e-07,3 | |||
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|short_description=p@chr1:94520868..94520897,- | |short_description=p@chr1:94520868..94520897,- | ||
}} | }} |
Latest revision as of 11:30, 28 July 2015
Short description: | p@chr1:94520868..94520897, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:94520868..94520897, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 5.69e-22 | 7 |
germ cell | 5.69e-22 | 7 |
epithelial cell of uterus | 4.55e-12 | 6 |
stromal cell of endometrium | 4.55e-12 | 6 |
pneumocyte | 9.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 1.38e-37 | 11 |
male genital duct | 5.15e-23 | 3 |
internal male genitalia | 5.15e-23 | 3 |
testis | 2.57e-19 | 8 |
male organism | 6.72e-19 | 22 |
male reproductive system | 6.72e-19 | 22 |
epididymis | 3.75e-18 | 1 |
vas deferens | 1.22e-17 | 1 |
spermatic cord | 1.22e-17 | 1 |
duct of male reproductive system | 1.57e-17 | 4 |
reproductive organ | 1.47e-16 | 48 |
reproductive structure | 2.09e-13 | 59 |
reproductive system | 2.09e-13 | 59 |
internal genitalia | 5.93e-11 | 25 |
bronchoalveolar duct junction | 1.57e-09 | 2 |
alveolar duct | 1.57e-09 | 2 |
bronchiole | 1.57e-09 | 2 |
duct | 1.93e-08 | 19 |
gonad | 9.73e-08 | 21 |
indifferent external genitalia | 9.73e-08 | 21 |
indifferent gonad | 9.73e-08 | 21 |
gonad primordium | 9.73e-08 | 21 |
external genitalia | 2.07e-07 | 22 |
cartilage tissue | 6.88e-07 | 3 |
skeletal tissue | 6.88e-07 | 3 |
pulmonary alveolus epithelium | 9.12e-07 | 3 |
alveolus | 9.12e-07 | 3 |
pulmonary lobule | 9.12e-07 | 3 |
lobule | 9.12e-07 | 3 |
alveolus of lung | 9.12e-07 | 3 |
alveolar system | 9.12e-07 | 3 |
pulmonary acinus | 9.12e-07 | 3 |
alveolar sac | 9.12e-07 | 3 |
alveolar wall | 9.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 4.44e-18 | 1 |
extraosseous chondrosarcoma | 4.44e-18 | 1 |
myxoid chondrosarcoma | 4.44e-18 | 1 |
extraskeletal myxoid chondrosarcoma | 4.44e-18 | 1 |
female reproductive endometrioid cancer | 4.55e-12 | 6 |
lung adenocarcinoma | 1.57e-09 | 2 |
cell type cancer | 1.08e-08 | 143 |
germ cell and embryonal cancer | 2.07e-07 | 22 |
germ cell cancer | 2.07e-07 | 22 |
carcinoma | 2.78e-07 | 106 |