FFCP PHASE1:Hg19::chr1:68220425..68220451,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:68220425..68220451,+ | |||
|coexpression_cluster_id=C374 | |||
|description=CAGE_peak_at_chr1:68220425..68220451,+ | |description=CAGE_peak_at_chr1:68220425..68220451,+ | ||
|id=chr1:68220425..68220451,+ | |id=chr1:68220425..68220451,+ | ||
|ontology_enrichment_celltype=CL:0000764!7.80e-09!2;CL:0000765!7.80e-09!2;CL:0000050!7.80e-09!2;CL:0000038!7.80e-09!2;CL:0000558!7.80e-09!2;CL:0000547!7.80e-09!2;CL:0000549!7.80e-09!2;CL:0000550!7.80e-09!2;CL:0000552!7.80e-09!2 | |ontology_enrichment_celltype=CL:0000764!7.80e-09!2;CL:0000765!7.80e-09!2;CL:0000050!7.80e-09!2;CL:0000038!7.80e-09!2;CL:0000558!7.80e-09!2;CL:0000547!7.80e-09!2;CL:0000549!7.80e-09!2;CL:0000550!7.80e-09!2;CL:0000552!7.80e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0000764;1.92e-20;2!CL:0000558;1.92e-20;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.92e-20,2;CL:0000765,1.92e-20,2;CL:0000050,1.92e-20,2;CL:0000038,1.92e-20,2;CL:0000558,1.92e-20,2;CL:0000547,1.92e-20,2;CL:0000549,1.92e-20,2;CL:0000550,1.92e-20,2;CL:0000552,1.92e-20,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:9119;2.54e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:9119,2.42e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!8.69e-30!15;UBERON:0000179!8.69e-30!15;UBERON:0000463!8.69e-30!15;UBERON:0000341!5.05e-08!2;UBERON:0002390!1.30e-07!102;UBERON:0003061!1.30e-07!102;UBERON:0007023!3.14e-07!115 | |ontology_enrichment_uberon=UBERON:0000178!8.69e-30!15;UBERON:0000179!8.69e-30!15;UBERON:0000463!8.69e-30!15;UBERON:0000341!5.05e-08!2;UBERON:0002390!1.30e-07!102;UBERON:0003061!1.30e-07!102;UBERON:0007023!3.14e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.63e-53;15!UBERON:0000179;5.63e-53;15!UBERON:0000463;5.63e-53;15!UBERON:0002390;2.99e-22;32!UBERON:0002193;2.01e-12;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.81e-53,15;UBERON:0000179,5.81e-53,15;UBERON:0000463,5.81e-53,15;UBERON:0007023,5.60e-09,114;UBERON:0002390,4.91e-07,98;UBERON:0003061,4.91e-07,98 | |||
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| ||
|short_description=p@chr1:68220425..68220451,+ | |short_description=p@chr1:68220425..68220451,+ | ||
}} | }} |
Latest revision as of 10:05, 28 July 2015
Short description: | p@chr1:68220425..68220451, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:68220425..68220451, + |
Coexpression cluster: | C374_acute_leukemia_Whole_Smooth_splenic_chronic_liver |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.92e-20 | 2 |
erythroblast | 1.92e-20 | 2 |
megakaryocyte-erythroid progenitor cell | 1.92e-20 | 2 |
erythroid progenitor cell | 1.92e-20 | 2 |
reticulocyte | 1.92e-20 | 2 |
proerythroblast | 1.92e-20 | 2 |
basophilic erythroblast | 1.92e-20 | 2 |
polychromatophilic erythroblast | 1.92e-20 | 2 |
orthochromatic erythroblast | 1.92e-20 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 5.81e-53 | 15 |
haemolymphatic fluid | 5.81e-53 | 15 |
organism substance | 5.81e-53 | 15 |
adult organism | 5.60e-09 | 114 |
hematopoietic system | 4.91e-07 | 98 |
blood island | 4.91e-07 | 98 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 2.42e-11 | 1 |