FFCP PHASE1:Hg19::chr1:32264356..32264380,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=90853 | |EntrezGene=90853 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26338 | |HGNC=26338 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000468720_5end | |association_with_transcript=0bp_to_ENST00000468720_5end | ||
|cluster_id=chr1:32264356..32264380,- | |||
|coexpression_cluster_id=C3970 | |||
|description=CAGE_peak_3_at_SPOCD1_5end | |description=CAGE_peak_3_at_SPOCD1_5end | ||
|id=chr1:32264356..32264380,- | |id=chr1:32264356..32264380,- | ||
|ontology_enrichment_celltype=CL:0000055!4.99e-43!180;CL:0000222!1.11e-22!119;CL:0000183!3.89e-22!59;CL:0000680!6.38e-22!57;CL:0000056!6.38e-22!57;CL:0000355!6.38e-22!57;CL:0000057!1.27e-21!75;CL:0000192!2.39e-21!42;CL:0000514!2.39e-21!42;CL:0000187!4.17e-21!54;CL:0002371!3.91e-20!591;CL:0000359!1.19e-18!32;CL:0000144!1.56e-18!625;CL:0000393!2.10e-17!60;CL:0000211!2.10e-17!60;CL:0000548!6.19e-17!679;CL:0000004!6.19e-17!679;CL:0000255!6.19e-17!679;CL:0000220!1.62e-16!246;CL:0000012!2.55e-16!682;CL:0002321!5.68e-16!248;CL:0000003!3.67e-14!722;CL:0002620!1.39e-09!23;CL:0002539!3.39e-08!10;CL:0000048!1.08e-07!430;CL:0000723!4.32e-07!436 | |ontology_enrichment_celltype=CL:0000055!4.99e-43!180;CL:0000222!1.11e-22!119;CL:0000183!3.89e-22!59;CL:0000680!6.38e-22!57;CL:0000056!6.38e-22!57;CL:0000355!6.38e-22!57;CL:0000057!1.27e-21!75;CL:0000192!2.39e-21!42;CL:0000514!2.39e-21!42;CL:0000187!4.17e-21!54;CL:0002371!3.91e-20!591;CL:0000359!1.19e-18!32;CL:0000144!1.56e-18!625;CL:0000393!2.10e-17!60;CL:0000211!2.10e-17!60;CL:0000548!6.19e-17!679;CL:0000004!6.19e-17!679;CL:0000255!6.19e-17!679;CL:0000220!1.62e-16!246;CL:0000012!2.55e-16!682;CL:0002321!5.68e-16!248;CL:0000003!3.67e-14!722;CL:0002620!1.39e-09!23;CL:0002539!3.39e-08!10;CL:0000048!1.08e-07!430;CL:0000723!4.32e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.19e-22;32!CL:0000192;9.67e-19;43!CL:0000187;3.83e-12;55!CL:0002539;1.53e-10;10!CL:0002620;2.55e-10;23!CL:0000393;1.42e-09;61!CL:0000211;1.42e-09;61!CL:0000134;2.94e-09;55!CL:0000057;1.15e-08;73!CL:0000048;1.70e-08;58!CL:0000723;3.44e-08;61!CL:0002320;5.42e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,5.34e-26,43;CL:0000514,5.34e-26,43;CL:0000680,1.27e-24,58;CL:0000056,1.27e-24,58;CL:0000355,1.27e-24,58;CL:0000359,6.40e-24,32;CL:0000187,1.71e-23,55;CL:0000057,5.64e-20,76;CL:0000222,1.27e-19,121;CL:0000393,1.52e-19,61;CL:0000211,1.52e-19,61;CL:0000048,1.59e-14,427;CL:0000723,1.06e-13,433;CL:0000034,1.18e-12,441;CL:0002539,1.38e-10,10;CL:0002620,3.89e-10,23;CL:0002321,5.48e-09,250 | |||
|ontology_enrichment_development_v019=CL:0000514;9.67e-19;43!CL:0000355;4.19e-13;58 | |||
|ontology_enrichment_disease=DOID:2394!4.74e-08!14 | |ontology_enrichment_disease=DOID:2394!4.74e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.05e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.03e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!3.37e-24!83;UBERON:0002329!3.37e-24!83;UBERON:0003077!3.37e-24!83;UBERON:0003059!3.37e-24!83;UBERON:0007282!3.37e-24!83;UBERON:0009618!3.37e-24!83;UBERON:0007285!3.37e-24!83;UBERON:0001637!1.55e-22!42;UBERON:0003509!1.55e-22!42;UBERON:0004572!1.55e-22!42;UBERON:0000486!3.30e-22!82;UBERON:0004290!9.75e-22!70;UBERON:0000055!1.37e-20!69;UBERON:0002049!2.25e-20!79;UBERON:0007798!2.25e-20!79;UBERON:0005256!3.26e-20!143;UBERON:0001981!1.04e-19!60;UBERON:0007500!1.04e-19!60;UBERON:0004537!1.04e-19!60;UBERON:0006965!1.04e-19!60;UBERON:0001134!7.89e-19!61;UBERON:0002036!7.89e-19!61;UBERON:0003082!7.89e-19!61;UBERON:0004535!3.62e-18!110;UBERON:0002385!4.93e-18!63;UBERON:0001015!4.93e-18!63;UBERON:0000383!4.93e-18!63;UBERON:0004573!5.30e-18!33;UBERON:0004571!5.30e-18!33;UBERON:0003914!1.63e-17!118;UBERON:0001009!8.33e-17!113;UBERON:0004872!1.18e-16!84;UBERON:0000490!5.92e-15!138;UBERON:0002100!6.58e-13!216;UBERON:0000475!5.33e-11!365;UBERON:0003102!6.65e-11!95;UBERON:0000119!8.50e-11!312;UBERON:0000483!1.09e-10!309;UBERON:0000947!4.50e-10!21;UBERON:0010191!4.50e-10!21;UBERON:0002199!8.97e-09!45;UBERON:0002416!8.97e-09!45;UBERON:0004237!3.39e-08!10;UBERON:0004695!3.39e-08!10;UBERON:0002111!3.39e-08!10;UBERON:0004178!3.39e-08!10;UBERON:0002097!1.44e-07!40;UBERON:0001135!3.53e-07!15;UBERON:0003104!5.40e-07!238;UBERON:0009142!5.40e-07!238 | |ontology_enrichment_uberon=UBERON:0000914!3.37e-24!83;UBERON:0002329!3.37e-24!83;UBERON:0003077!3.37e-24!83;UBERON:0003059!3.37e-24!83;UBERON:0007282!3.37e-24!83;UBERON:0009618!3.37e-24!83;UBERON:0007285!3.37e-24!83;UBERON:0001637!1.55e-22!42;UBERON:0003509!1.55e-22!42;UBERON:0004572!1.55e-22!42;UBERON:0000486!3.30e-22!82;UBERON:0004290!9.75e-22!70;UBERON:0000055!1.37e-20!69;UBERON:0002049!2.25e-20!79;UBERON:0007798!2.25e-20!79;UBERON:0005256!3.26e-20!143;UBERON:0001981!1.04e-19!60;UBERON:0007500!1.04e-19!60;UBERON:0004537!1.04e-19!60;UBERON:0006965!1.04e-19!60;UBERON:0001134!7.89e-19!61;UBERON:0002036!7.89e-19!61;UBERON:0003082!7.89e-19!61;UBERON:0004535!3.62e-18!110;UBERON:0002385!4.93e-18!63;UBERON:0001015!4.93e-18!63;UBERON:0000383!4.93e-18!63;UBERON:0004573!5.30e-18!33;UBERON:0004571!5.30e-18!33;UBERON:0003914!1.63e-17!118;UBERON:0001009!8.33e-17!113;UBERON:0004872!1.18e-16!84;UBERON:0000490!5.92e-15!138;UBERON:0002100!6.58e-13!216;UBERON:0000475!5.33e-11!365;UBERON:0003102!6.65e-11!95;UBERON:0000119!8.50e-11!312;UBERON:0000483!1.09e-10!309;UBERON:0000947!4.50e-10!21;UBERON:0010191!4.50e-10!21;UBERON:0002199!8.97e-09!45;UBERON:0002416!8.97e-09!45;UBERON:0004237!3.39e-08!10;UBERON:0004695!3.39e-08!10;UBERON:0002111!3.39e-08!10;UBERON:0004178!3.39e-08!10;UBERON:0002097!1.44e-07!40;UBERON:0001135!3.53e-07!15;UBERON:0003104!5.40e-07!238;UBERON:0009142!5.40e-07!238 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.46e-21;33!UBERON:0004571;5.46e-21;33!UBERON:0001637;1.99e-20;42!UBERON:0003509;1.99e-20;42!UBERON:0004572;1.99e-20;42!UBERON:0007500;3.01e-13;56!UBERON:0001981;3.01e-13;56!UBERON:0004537;3.01e-13;56!UBERON:0000947;1.50e-12;21!UBERON:0010191;1.50e-12;21!UBERON:0003914;7.04e-11;74!UBERON:0004237;1.53e-10;10!UBERON:0004695;1.53e-10;10!UBERON:0002111;1.53e-10;10!UBERON:0004178;1.53e-10;10!UBERON:0000055;3.28e-10;65!UBERON:0002049;2.33e-08;75!UBERON:0007798;2.33e-08;75!UBERON:0001135;6.30e-08;15!UBERON:0002097;2.12e-07;41!UBERON:0002385;3.61e-07;31!UBERON:0001015;3.61e-07;31!UBERON:0000383;3.61e-07;31 | |||
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| ||
|short_description=p3@SPOCD1 | |short_description=p3@SPOCD1 | ||
}} | }} |
Latest revision as of 14:00, 17 September 2015
Short description: | p3@SPOCD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SPOCD1_5end |
Coexpression cluster: | C3970_Smooth_Fibroblast_basal_Mesothelial_mesenchymal_leiomyoma_Aortic |
Association with transcript: | 0bp_to_ENST00000468720_5end |
EntrezGene: | SPOCD1 |
HGNC: | 26338 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 5.34e-26 | 43 |
smooth muscle myoblast | 5.34e-26 | 43 |
muscle precursor cell | 1.27e-24 | 58 |
myoblast | 1.27e-24 | 58 |
multi-potent skeletal muscle stem cell | 1.27e-24 | 58 |
vascular associated smooth muscle cell | 6.40e-24 | 32 |
muscle cell | 1.71e-23 | 55 |
fibroblast | 5.64e-20 | 76 |
mesodermal cell | 1.27e-19 | 121 |
electrically responsive cell | 1.52e-19 | 61 |
electrically active cell | 1.52e-19 | 61 |
multi fate stem cell | 1.59e-14 | 427 |
somatic stem cell | 1.06e-13 | 433 |
stem cell | 1.18e-12 | 441 |
aortic smooth muscle cell | 1.38e-10 | 10 |
skin fibroblast | 3.89e-10 | 23 |
embryonic cell | 5.48e-09 | 250 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.03e-10 | 14 |