FFCP PHASE1:Hg19::chr1:32264166..32264245,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=90853 | |EntrezGene=90853 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26338 | |HGNC=26338 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZMY3 | |UniProt=Q6ZMY3 | ||
|association_with_transcript=0bp_to_ENST00000460061,ENST00000473361,ENST00000532604,uc001btw.1_5end | |association_with_transcript=0bp_to_ENST00000460061,ENST00000473361,ENST00000532604,uc001btw.1_5end | ||
|cluster_id=chr1:32264166..32264245,- | |||
|coexpression_cluster_id=C3970 | |||
|description=CAGE_peak_2_at_SPOCD1_5end | |description=CAGE_peak_2_at_SPOCD1_5end | ||
|id=chr1:32264166..32264245,- | |id=chr1:32264166..32264245,- | ||
|ontology_enrichment_celltype=CL:0000055!1.82e-46!180;CL:0000222!9.69e-25!119;CL:0000680!6.58e-24!57;CL:0000056!6.58e-24!57;CL:0000355!6.58e-24!57;CL:0000183!6.56e-23!59;CL:0000187!1.63e-22!54;CL:0002371!6.67e-22!591;CL:0000144!1.00e-20!625;CL:0000220!1.20e-20!246;CL:0000393!2.02e-20!60;CL:0000211!2.02e-20!60;CL:0002321!3.32e-20!248;CL:0000057!3.90e-19!75;CL:0000192!1.34e-18!42;CL:0000514!1.34e-18!42;CL:0000359!2.48e-16!32;CL:0000548!3.44e-15!679;CL:0000004!3.44e-15!679;CL:0000255!3.44e-15!679;CL:0000012!1.83e-14!682;CL:0002620!4.29e-10!23;CL:0000003!6.54e-10!722;CL:0000048!1.69e-08!430;CL:0000723!6.94e-08!436;CL:0002494!4.66e-07!16;CL:0000034!4.93e-07!444 | |ontology_enrichment_celltype=CL:0000055!1.82e-46!180;CL:0000222!9.69e-25!119;CL:0000680!6.58e-24!57;CL:0000056!6.58e-24!57;CL:0000355!6.58e-24!57;CL:0000183!6.56e-23!59;CL:0000187!1.63e-22!54;CL:0002371!6.67e-22!591;CL:0000144!1.00e-20!625;CL:0000220!1.20e-20!246;CL:0000393!2.02e-20!60;CL:0000211!2.02e-20!60;CL:0002321!3.32e-20!248;CL:0000057!3.90e-19!75;CL:0000192!1.34e-18!42;CL:0000514!1.34e-18!42;CL:0000359!2.48e-16!32;CL:0000548!3.44e-15!679;CL:0000004!3.44e-15!679;CL:0000255!3.44e-15!679;CL:0000012!1.83e-14!682;CL:0002620!4.29e-10!23;CL:0000003!6.54e-10!722;CL:0000048!1.69e-08!430;CL:0000723!6.94e-08!436;CL:0002494!4.66e-07!16;CL:0000034!4.93e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.75e-17;32!CL:0000192;1.96e-15;43!CL:0000187;2.00e-14;55!CL:0000393;1.80e-12;61!CL:0000211;1.80e-12;61!CL:0002620;2.01e-11;23!CL:0000057;6.56e-09;73!CL:0000723;2.42e-08;61!CL:0000048;3.39e-08;58!CL:0000134;3.51e-08;55!CL:0002494;8.52e-08;16!CL:0002320;4.74e-07;188!CL:0002539;8.92e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,3.34e-27,58;CL:0000056,3.34e-27,58;CL:0000355,3.34e-27,58;CL:0000222,7.53e-26,121;CL:0000187,1.27e-25,55;CL:0000393,9.08e-24,61;CL:0000211,9.08e-24,61;CL:0000192,3.52e-21,43;CL:0000514,3.52e-21,43;CL:0000057,3.59e-21,76;CL:0000359,2.95e-18,32;CL:0002321,8.21e-18,250;CL:0000048,7.52e-16,427;CL:0000723,5.44e-15,433;CL:0000034,1.70e-13,441;CL:0002620,2.19e-11,23;CL:0002494,8.89e-08,16;CL:0002539,8.59e-07,10;CL:0002139,8.76e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000514;1.96e-15;43!CL:0000355;1.26e-14;58!CL:0000222;7.75e-07;121 | |||
|ontology_enrichment_disease=DOID:2394!5.43e-07!14 | |ontology_enrichment_disease=DOID:2394!5.43e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;2.40e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.34e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!6.08e-25!83;UBERON:0002329!6.08e-25!83;UBERON:0003077!6.08e-25!83;UBERON:0003059!6.08e-25!83;UBERON:0007282!6.08e-25!83;UBERON:0009618!6.08e-25!83;UBERON:0007285!6.08e-25!83;UBERON:0000486!8.43e-24!82;UBERON:0004290!8.48e-24!70;UBERON:0002049!2.07e-22!79;UBERON:0007798!2.07e-22!79;UBERON:0001134!1.01e-20!61;UBERON:0002036!1.01e-20!61;UBERON:0003082!1.01e-20!61;UBERON:0001637!4.96e-20!42;UBERON:0003509!4.96e-20!42;UBERON:0004572!4.96e-20!42;UBERON:0002385!5.21e-20!63;UBERON:0001015!5.21e-20!63;UBERON:0000383!5.21e-20!63;UBERON:0000055!1.72e-19!69;UBERON:0001981!1.71e-18!60;UBERON:0007500!1.71e-18!60;UBERON:0004537!1.71e-18!60;UBERON:0006965!1.71e-18!60;UBERON:0004872!4.92e-18!84;UBERON:0005256!2.32e-17!143;UBERON:0004535!9.89e-17!110;UBERON:0000490!5.69e-16!138;UBERON:0004573!1.07e-15!33;UBERON:0004571!1.07e-15!33;UBERON:0003914!1.59e-15!118;UBERON:0001009!2.90e-15!113;UBERON:0000475!2.38e-14!365;UBERON:0000119!1.44e-13!312;UBERON:0000483!6.20e-13!309;UBERON:0002100!3.64e-12!216;UBERON:0002199!6.97e-09!45;UBERON:0002416!6.97e-09!45;UBERON:0000468!7.55e-09!659;UBERON:0000467!8.18e-09!625;UBERON:0003102!1.04e-08!95;UBERON:0000480!1.24e-08!626;UBERON:0000947!1.36e-08!21;UBERON:0010191!1.36e-08!21;UBERON:0002097!5.50e-07!40;UBERON:0004111!6.21e-07!241;UBERON:0000481!6.42e-07!347 | |ontology_enrichment_uberon=UBERON:0000914!6.08e-25!83;UBERON:0002329!6.08e-25!83;UBERON:0003077!6.08e-25!83;UBERON:0003059!6.08e-25!83;UBERON:0007282!6.08e-25!83;UBERON:0009618!6.08e-25!83;UBERON:0007285!6.08e-25!83;UBERON:0000486!8.43e-24!82;UBERON:0004290!8.48e-24!70;UBERON:0002049!2.07e-22!79;UBERON:0007798!2.07e-22!79;UBERON:0001134!1.01e-20!61;UBERON:0002036!1.01e-20!61;UBERON:0003082!1.01e-20!61;UBERON:0001637!4.96e-20!42;UBERON:0003509!4.96e-20!42;UBERON:0004572!4.96e-20!42;UBERON:0002385!5.21e-20!63;UBERON:0001015!5.21e-20!63;UBERON:0000383!5.21e-20!63;UBERON:0000055!1.72e-19!69;UBERON:0001981!1.71e-18!60;UBERON:0007500!1.71e-18!60;UBERON:0004537!1.71e-18!60;UBERON:0006965!1.71e-18!60;UBERON:0004872!4.92e-18!84;UBERON:0005256!2.32e-17!143;UBERON:0004535!9.89e-17!110;UBERON:0000490!5.69e-16!138;UBERON:0004573!1.07e-15!33;UBERON:0004571!1.07e-15!33;UBERON:0003914!1.59e-15!118;UBERON:0001009!2.90e-15!113;UBERON:0000475!2.38e-14!365;UBERON:0000119!1.44e-13!312;UBERON:0000483!6.20e-13!309;UBERON:0002100!3.64e-12!216;UBERON:0002199!6.97e-09!45;UBERON:0002416!6.97e-09!45;UBERON:0000468!7.55e-09!659;UBERON:0000467!8.18e-09!625;UBERON:0003102!1.04e-08!95;UBERON:0000480!1.24e-08!626;UBERON:0000947!1.36e-08!21;UBERON:0010191!1.36e-08!21;UBERON:0002097!5.50e-07!40;UBERON:0004111!6.21e-07!241;UBERON:0000481!6.42e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.72e-15;42!UBERON:0003509;1.72e-15;42!UBERON:0004572;1.72e-15;42!UBERON:0004573;1.73e-15;33!UBERON:0004571;1.73e-15;33!UBERON:0007500;1.45e-12;56!UBERON:0001981;1.45e-12;56!UBERON:0004537;1.45e-12;56!UBERON:0002049;1.53e-11;75!UBERON:0007798;1.53e-11;75!UBERON:0000055;3.66e-11;65!UBERON:0003914;5.62e-10;74!UBERON:0000947;4.35e-09;21!UBERON:0010191;4.35e-09;21!UBERON:0002385;1.08e-07;31!UBERON:0001015;1.08e-07;31!UBERON:0000383;1.08e-07;31!UBERON:0004237;8.92e-07;10!UBERON:0004695;8.92e-07;10!UBERON:0002111;8.92e-07;10!UBERON:0004178;8.92e-07;10!UBERON:0000487;9.17e-07;22 | |||
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|short_description=p2@SPOCD1 | |short_description=p2@SPOCD1 | ||
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Latest revision as of 13:59, 17 September 2015
Short description: | p2@SPOCD1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SPOCD1_5end |
Coexpression cluster: | C3970_Smooth_Fibroblast_basal_Mesothelial_mesenchymal_leiomyoma_Aortic |
Association with transcript: | 0bp_to_ENST00000460061, ENST00000473361, ENST00000532604, uc001btw.1_5end |
EntrezGene: | SPOCD1 |
HGNC: | 26338 |
UniProt: | Q6ZMY3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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muscle precursor cell | 3.34e-27 | 58 |
myoblast | 3.34e-27 | 58 |
multi-potent skeletal muscle stem cell | 3.34e-27 | 58 |
mesodermal cell | 7.53e-26 | 121 |
muscle cell | 1.27e-25 | 55 |
electrically responsive cell | 9.08e-24 | 61 |
electrically active cell | 9.08e-24 | 61 |
smooth muscle cell | 3.52e-21 | 43 |
smooth muscle myoblast | 3.52e-21 | 43 |
fibroblast | 3.59e-21 | 76 |
vascular associated smooth muscle cell | 2.95e-18 | 32 |
embryonic cell | 8.21e-18 | 250 |
multi fate stem cell | 7.52e-16 | 427 |
somatic stem cell | 5.44e-15 | 433 |
stem cell | 1.70e-13 | 441 |
skin fibroblast | 2.19e-11 | 23 |
cardiocyte | 8.89e-08 | 16 |
aortic smooth muscle cell | 8.59e-07 | 10 |
endothelial cell of vascular tree | 8.76e-07 | 24 |
Ontology term | p-value | n |
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ovarian cancer | 2.34e-07 | 14 |