FFCP PHASE1:Hg19::chr1:27320979..27320998,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:27320979..27320998,+ | |||
|description=CAGE_peak_at_chr1:27320979..27320998,+ | |description=CAGE_peak_at_chr1:27320979..27320998,+ | ||
|id=chr1:27320979..27320998,+ | |id=chr1:27320979..27320998,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.86e-10!180;CL:0000057!3.42e-09!75;CL:0002321!1.26e-08!248;CL:0000183!1.57e-08!59;CL:0000220!1.99e-08!246;CL:0000222!5.08e-08!119;CL:0000187!6.75e-07!54 | |ontology_enrichment_celltype=CL:0000055!1.86e-10!180;CL:0000057!3.42e-09!75;CL:0002321!1.26e-08!248;CL:0000183!1.57e-08!59;CL:0000220!1.99e-08!246;CL:0000222!5.08e-08!119;CL:0000187!6.75e-07!54 | ||
|ontology_enrichment_celltype_v019=CL:0002586;1.37e-09;3!CL:0000077;3.29e-09;19!CL:0002363;1.11e-07;2!CL:0002327;2.26e-07;4!CL:0000149;2.76e-07;4!CL:0002554;3.46e-07;2!CL:0002561;4.55e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,7.18e-10,3;CL:0000077,2.55e-09,19;CL:0000066,8.64e-09,253;CL:0002363,1.27e-07,2;CL:0000008,1.27e-07,2;CL:0000149,1.71e-07,4;CL:0002327,1.87e-07,4;CL:0002554,3.04e-07,2;CL:0002561,3.66e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000008;1.11e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!3.03e-14!365;UBERON:0002100!5.64e-13!216;UBERON:0005256!9.94e-13!143;UBERON:0000119!8.56e-12!312;UBERON:0000481!1.69e-11!347;UBERON:0000483!4.98e-11!309;UBERON:0003104!6.73e-11!238;UBERON:0009142!6.73e-11!238;UBERON:0000468!7.11e-09!659;UBERON:0000467!1.75e-08!625;UBERON:0000480!2.35e-08!626;UBERON:0000914!8.34e-08!83;UBERON:0002329!8.34e-08!83;UBERON:0003077!8.34e-08!83;UBERON:0003059!8.34e-08!83;UBERON:0007282!8.34e-08!83;UBERON:0009618!8.34e-08!83;UBERON:0007285!8.34e-08!83;UBERON:0000062!8.78e-08!511;UBERON:0003103!9.13e-08!69;UBERON:0004290!2.52e-07!70;UBERON:0003102!3.09e-07!95 | |ontology_enrichment_uberon=UBERON:0000475!3.03e-14!365;UBERON:0002100!5.64e-13!216;UBERON:0005256!9.94e-13!143;UBERON:0000119!8.56e-12!312;UBERON:0000481!1.69e-11!347;UBERON:0000483!4.98e-11!309;UBERON:0003104!6.73e-11!238;UBERON:0009142!6.73e-11!238;UBERON:0000468!7.11e-09!659;UBERON:0000467!1.75e-08!625;UBERON:0000480!2.35e-08!626;UBERON:0000914!8.34e-08!83;UBERON:0002329!8.34e-08!83;UBERON:0003077!8.34e-08!83;UBERON:0003059!8.34e-08!83;UBERON:0007282!8.34e-08!83;UBERON:0009618!8.34e-08!83;UBERON:0007285!8.34e-08!83;UBERON:0000062!8.78e-08!511;UBERON:0003103!9.13e-08!69;UBERON:0004290!2.52e-07!70;UBERON:0003102!3.09e-07!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0001781;1.37e-09;3!UBERON:0001782;1.37e-09;3!UBERON:0003891;1.00e-07;4!UBERON:0003566;1.11e-07;2!UBERON:0001777;1.11e-07;2!UBERON:0001911;2.26e-07;4!UBERON:0005933;4.55e-07;2!UBERON:0005942;4.55e-07;2!UBERON:0005932;4.55e-07;2!UBERON:0000019;6.88e-07;19!UBERON:0000047;6.88e-07;19!UBERON:0004088;6.88e-07;19!UBERON:0010230;6.88e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005085,8.52e-14,31;UBERON:0001782,7.18e-10,3;UBERON:0005424,7.18e-10,3;UBERON:0000076,4.29e-09,8;UBERON:0003566,1.27e-07,2;UBERON:0001777,1.27e-07,2;UBERON:0001781,1.71e-07,4;UBERON:0003891,1.83e-07,4;UBERON:0001911,1.87e-07,4;UBERON:0005333,1.87e-07,4;UBERON:0008425,1.87e-07,4;UBERON:0005311,1.87e-07,4;UBERON:0005933,3.66e-07,2;UBERON:0005942,3.66e-07,2;UBERON:0005932,3.66e-07,2 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.422863212287913,0,0.893922188854576,0,0,0,0,1.47440361900905,2.09340350391728,0.218441372130172,0,0.37129905888014,0.662794751455832,1.34465029290355,0,0.730310090387373,0.487932798790507,0.861847406537515,0.816002764977012,0.940364164434263,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0.256160706529101,0,0,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0.209658645508376,0,0.150176892841506,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0.50133791063589,0,0,0,0.0945348171640679,0.221729397462564,0,0.0654895377488563,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0,0,0,1.25849830862972,0,0.208994966536811,0.516833518338658,0,0.33472061276467,0,0.760272105718513,0,0,1.62028389576352,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.397227542439656,0,0.354668382198357,0,1.06748995729705,0.24666754841716,0.311211035399766,0.404132016209064,0.163461903113459,0.302714855289863,0.576175924479999,4.68642863667593,1.5608003841516,0,0.298897361103602,0.469737994575059,0.323745888736263,0.280901613404497,0,0.737005903870608,0.723280468230358,0,0,3.64064544775211,1.43723628363248,0.336672227908132,0.125118519871964,0.831192346452549,0,0,0,0.453728732640084,0.179389635688862,0.427114777637135,1.05965950579781,0.600182192168805,0.103052529238439,0.257640540045629,0.930584281657949,0.337552664482532,0.292311015483596,0.252433774244115,0.184099797284599,0.323292113637624,0,0.604512589365842,0.339121184620975,0.193260853163297,0,0.573609190778008,0.243947412259191,0.132529768321485,0,0,0,0.36497735907583,0,0,4.14404764057442,2.3218396401599,1.44375896333917,0,0,0,0,0.217879444092406,0,0,0,0,0.738155454624648,1.40241773803446,1.6462960453256,0,0,0.982827216677626,0,0,0.245976877086227,0,0.878002283269004,0,0.402115889646523,0.185176890317059,10.7516740752407,2.07986957055916,1.44331342025273,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,1.88072897675981,3.19697332365358,1.15014803749563,0,0,0,0,0,0.190493682876507,0.763976851116555,0,1.71072446022705,0,0,0,1.00917975910825,0.43596006883328,0.36669142910475,0.646358578788889,3.57656445851882,0,0.797814349754612,0,0.257207374262142,0,1.3321108950805,1.14382394926518,2.17048642156577,0,0,0,0,2.1100756394171,5.22920075160176,1.59956785891291,0,0,0,0.718874566474748,0,0,0.868687840005475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0,0.813795071099207,0.415941723061614,1.24900292158013,0.315404830067869,0.234282829985426,0.300946099727719,0,2.0694614258501,0,0,1.04260337361699,0.391602314925481,0.343143423810856,0,0,0,1.21251028578504,0,0,1.24053903909388,0,0.280660094433074,0.640695746278505,0.511707249066704,0.321707842287215,0,0.308419387605311,0.355123450626254,0.410635780069046,0,0.581051892299796,0.120859449591622,0.802025881213139,0.828728900423067,0.803701137152247,0.546273504020151,0.786746489756545,2.70719767744447,0.385076685522074,1.56869953835371,0,0.105551628892876,0,0.510281115829547,0.215915916102139,1.54227252690289,0.812839312631559,1.00337954770971,0.254876273045038,0.831076008928724,0.447749509444357,0,0,1.28225062558195,2.29610251989794,1.95227036798582,0,0,0,0,0.650060246036521,0,0,0.462145851343933,0.307007349452259,0,0.214840489736547,0.580066775656914,0.170453254832202,0.267096106940212,0.826424576804891,1.15314040419064,0,0.30347334256665,0.464845549297286,0,0,0.616067160352178,1.59691809095107,0.869932992075073,0,0.286249773483982,0.372158369359667,0.632758849437452,0.953150969619124,0,0.42793898803392,0.318203247925937,0.78494864019923,0.539617372749944,0.274537029736055,0.589062011728432,0.202182481573316,3.17020642346017,0,0.48763373908959,0.731140468893853,0,0.545999645631943,0,0,0,0,0.438450885253763,5.78775534266688,0.655894752046633,0.202910376962704,0.6196469961995,0.281695602532241,0.286822704408103,0.392996164052485,0,0.709522128141196,0,0,0,0.699869440489966,0.288666338176536,0.670302275535787,0,0,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.95497793895076,0.296964680832639,1.53580351049616,0,0,0,0,0,0.19924798825107,0,0.503865495708552,0,0,1.24415835064723,0.629078458031288,0,0,0.197286811273867,0,1.11136990144637,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0.468528891450678,0,0,0,0.394584402849391,0,0,0.189559738885464,0.450970258243478,0,0,0,0,0,1.13843818411917,0,0,0.0979923974143777,0.261177619741208,0.17472666824203,0,0,0,0,0.678923115418936,0.176512253383001,0,0,0,0,0,0,0.640358984218058,0.19980960958213,0,0,0,0,0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| ||
|short_description=p@chr1:27320979..27320998,+ | |short_description=p@chr1:27320979..27320998,+ | ||
}} | }} |
Latest revision as of 06:43, 28 July 2015
Short description: | p@chr1:27320979..27320998, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:27320979..27320998, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 7.18e-10 | 3 |
mesothelial cell | 2.55e-09 | 19 |
epithelial cell | 8.64e-09 | 253 |
keratocyte | 1.27e-07 | 2 |
migratory cranial neural crest cell | 1.27e-07 | 2 |
visual pigment cell | 1.71e-07 | 4 |
mammary gland epithelial cell | 1.87e-07 | 4 |
fibroblast of lymphatic vessel | 3.04e-07 | 2 |
outer root sheath cell | 3.66e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ectodermal placode | 8.52e-14 | 31 |
pigmented layer of retina | 7.18e-10 | 3 |
presumptive retinal pigmented epithelium | 7.18e-10 | 3 |
external ectoderm | 4.29e-09 | 8 |
head connective tissue | 1.27e-07 | 2 |
substantia propria of cornea | 1.27e-07 | 2 |
layer of retina | 1.71e-07 | 4 |
stroma | 1.83e-07 | 4 |
mammary gland | 1.87e-07 | 4 |
mammary bud | 1.87e-07 | 4 |
mammary ridge | 1.87e-07 | 4 |
mammary placode | 1.87e-07 | 4 |
hair root sheath | 3.66e-07 | 2 |
hair outer root sheath | 3.66e-07 | 2 |
bulb of hair follicle | 3.66e-07 | 2 |