FFCP PHASE1:Hg19::chr1:153935255..153935274,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27173 | |EntrezGene=27173 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=12876 | |HGNC=12876 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NY26 | |UniProt=Q9NY26 | ||
|association_with_transcript=-30bp_to_AF132942_5end | |association_with_transcript=-30bp_to_AF132942_5end | ||
|cluster_id=chr1:153935255..153935274,- | |||
|description=CAGE_peak_7_at_SLC39A1_5end | |description=CAGE_peak_7_at_SLC39A1_5end | ||
|id=chr1:153935255..153935274,- | |id=chr1:153935255..153935274,- | ||
|ontology_enrichment_celltype=CL:0002009!1.12e-25!65;CL:0002194!5.62e-25!63;CL:0000576!5.62e-25!63;CL:0000040!5.62e-25!63;CL:0000559!5.62e-25!63;CL:0002057!2.56e-24!42;CL:0000860!1.40e-22!45;CL:0000557!4.00e-21!71;CL:0000766!5.87e-20!76;CL:0000839!9.20e-20!70;CL:0000763!9.95e-10!112;CL:0000049!9.95e-10!112;CL:1000507!1.64e-07!12;CL:1000494!1.64e-07!12;CL:0002393!4.42e-07!9;CL:0002397!4.42e-07!9;CL:0000063!6.97e-07!578 | |ontology_enrichment_celltype=CL:0002009!1.12e-25!65;CL:0002194!5.62e-25!63;CL:0000576!5.62e-25!63;CL:0000040!5.62e-25!63;CL:0000559!5.62e-25!63;CL:0002057!2.56e-24!42;CL:0000860!1.40e-22!45;CL:0000557!4.00e-21!71;CL:0000766!5.87e-20!76;CL:0000839!9.20e-20!70;CL:0000763!9.95e-10!112;CL:0000049!9.95e-10!112;CL:1000507!1.64e-07!12;CL:1000494!1.64e-07!12;CL:0002393!4.42e-07!9;CL:0002397!4.42e-07!9;CL:0000063!6.97e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0000473;8.73e-20;39!CL:0000234;8.73e-20;39!CL:0000576;8.43e-19;48!CL:0000860;1.29e-16;33!CL:0002057;1.29e-16;33!CL:0000766;5.70e-15;69!CL:1000507;7.37e-13;10!CL:1000494;7.37e-13;10!CL:0000235;1.28e-10;6!CL:1000449;1.66e-10;15!CL:1000497;4.70e-09;17!CL:0002518;4.70e-09;17!CL:0000875;9.14e-09;3!CL:0002396;9.14e-09;3!CL:0002681;2.05e-08;12!CL:0002584;2.05e-08;12!CL:0002619;2.16e-08;3!CL:0002586;1.88e-07;3!CL:0000763;9.89e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,7.41e-39,59;CL:0000576,7.41e-39,59;CL:0000040,7.41e-39,59;CL:0000559,7.41e-39,59;CL:0002009,2.96e-37,61;CL:0000839,1.13e-33,66;CL:0000473,1.88e-33,48;CL:0000234,1.88e-33,48;CL:0000557,5.08e-33,67;CL:0000766,4.30e-32,72;CL:0000860,1.96e-25,42;CL:0002057,1.96e-25,42;CL:0000763,5.35e-18,108;CL:0000049,5.35e-18,108;CL:0002087,2.95e-16,115;CL:0002031,4.13e-14,120;CL:0000738,3.14e-13,136;CL:1000507,1.29e-12,10;CL:1000494,1.29e-12,10;CL:0000235,1.76e-10,6;CL:1000449,2.53e-10,15;CL:0002393,8.43e-10,9;CL:0002397,8.43e-10,9;CL:0000988,3.05e-09,177;CL:0002032,5.70e-09,161;CL:0000837,5.70e-09,161;CL:0000037,6.45e-09,168;CL:1000497,6.74e-09,17;CL:0002518,6.74e-09,17;CL:0000875,9.53e-09,3;CL:0002396,9.53e-09,3;CL:0002619,2.07e-08,3;CL:0002681,4.13e-08,12;CL:0002584,4.13e-08,12;CL:0002586,2.04e-07,3;CL:0000134,2.52e-07,354;CL:0002320,6.29e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;9.27e-18;42!CL:0000049;6.18e-08;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.59e-25!102;UBERON:0003061!4.59e-25!102;UBERON:0002193!4.58e-23!112;UBERON:0002371!9.87e-23!80;UBERON:0001474!1.19e-20!86;UBERON:0004765!1.46e-18!101;UBERON:0001434!1.46e-18!101;UBERON:0002405!2.32e-17!115;UBERON:0003081!1.07e-16!216;UBERON:0000926!4.56e-15!448;UBERON:0004120!4.56e-15!448;UBERON:0006603!4.56e-15!448;UBERON:0002204!1.67e-12!167;UBERON:0000467!6.86e-09!625;UBERON:0000062!8.72e-09!511;UBERON:0000480!9.61e-09!626;UBERON:0000468!9.96e-08!659;UBERON:0009773!1.64e-07!12;UBERON:0001231!1.64e-07!12;UBERON:0004810!1.64e-07!12;UBERON:0003887!3.58e-07!21;UBERON:0006555!6.77e-07!17;UBERON:0005103!6.77e-07!17;UBERON:0000083!6.77e-07!17;UBERON:0009201!6.77e-07!17;UBERON:0004819!6.77e-07!17;UBERON:0006553!6.77e-07!17;UBERON:0003074!6.77e-07!17;UBERON:0003060!6.77e-07!17;UBERON:0000923!7.54e-07!604;UBERON:0005291!7.54e-07!604;UBERON:0006598!7.54e-07!604;UBERON:0002532!7.54e-07!604 | |ontology_enrichment_uberon=UBERON:0002390!4.59e-25!102;UBERON:0003061!4.59e-25!102;UBERON:0002193!4.58e-23!112;UBERON:0002371!9.87e-23!80;UBERON:0001474!1.19e-20!86;UBERON:0004765!1.46e-18!101;UBERON:0001434!1.46e-18!101;UBERON:0002405!2.32e-17!115;UBERON:0003081!1.07e-16!216;UBERON:0000926!4.56e-15!448;UBERON:0004120!4.56e-15!448;UBERON:0006603!4.56e-15!448;UBERON:0002204!1.67e-12!167;UBERON:0000467!6.86e-09!625;UBERON:0000062!8.72e-09!511;UBERON:0000480!9.61e-09!626;UBERON:0000468!9.96e-08!659;UBERON:0009773!1.64e-07!12;UBERON:0001231!1.64e-07!12;UBERON:0004810!1.64e-07!12;UBERON:0003887!3.58e-07!21;UBERON:0006555!6.77e-07!17;UBERON:0005103!6.77e-07!17;UBERON:0000083!6.77e-07!17;UBERON:0009201!6.77e-07!17;UBERON:0004819!6.77e-07!17;UBERON:0006553!6.77e-07!17;UBERON:0003074!6.77e-07!17;UBERON:0003060!6.77e-07!17;UBERON:0000923!7.54e-07!604;UBERON:0005291!7.54e-07!604;UBERON:0006598!7.54e-07!604;UBERON:0002532!7.54e-07!604 | ||
|ontology_enrichment_uberon_v019=UBERON:0004211;7.37e-13;10!UBERON:0009773;7.37e-13;10!UBERON:0001231;7.37e-13;10!UBERON:0004810;7.37e-13;10!UBERON:0006555;1.66e-10;15!UBERON:0004819;1.66e-10;15!UBERON:0001285;1.66e-10;15!UBERON:0007684;1.66e-10;15!UBERON:0001225;2.05e-08;12!UBERON:0008987;2.05e-08;12!UBERON:0001781;1.88e-07;3!UBERON:0001782;1.88e-07;3 | |||
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| ||
|short_description=p7@SLC39A1 | |short_description=p7@SLC39A1 | ||
}} | }} |
Latest revision as of 07:52, 17 September 2015
Short description: | p7@SLC39A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SLC39A1_5end |
Coexpression cluster: | NA |
Association with transcript: | -30bp_to_AF132942_5end |
EntrezGene: | SLC39A1 |
HGNC: | 12876 |
UniProt: | Q9NY26 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.35e-33 | 76 |
hematopoietic system | 1.36e-31 | 98 |
blood island | 1.36e-31 | 98 |
bone element | 2.42e-30 | 82 |
hemolymphoid system | 4.01e-29 | 108 |
immune system | 1.11e-28 | 93 |
skeletal element | 1.11e-26 | 90 |
skeletal system | 2.34e-24 | 100 |
lateral plate mesoderm | 2.57e-17 | 203 |
musculoskeletal system | 1.16e-12 | 167 |
nephron tubule epithelium | 1.29e-12 | 10 |
mesoderm | 1.71e-11 | 315 |
mesoderm-derived structure | 1.71e-11 | 315 |
presumptive mesoderm | 1.71e-11 | 315 |
nephron epithelium | 2.53e-10 | 15 |
renal tubule | 2.53e-10 | 15 |
nephron tubule | 2.53e-10 | 15 |
nephron | 2.53e-10 | 15 |
uriniferous tubule | 2.53e-10 | 15 |
nephrogenic mesenchyme | 2.53e-10 | 15 |
excretory tube | 1.45e-09 | 16 |
kidney epithelium | 1.45e-09 | 16 |
cortex of kidney | 4.13e-08 | 12 |
renal parenchyma | 4.13e-08 | 12 |
pigmented layer of retina | 2.04e-07 | 3 |
presumptive retinal pigmented epithelium | 2.04e-07 | 3 |
connective tissue | 8.01e-07 | 371 |