FFCP PHASE1:Hg19::chr19:48233021..48233040,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:48233021..48233040,+ | |||
|description=CAGE_peak_at_chr19:48233021..48233040,+ | |description=CAGE_peak_at_chr19:48233021..48233040,+ | ||
|id=chr19:48233021..48233040,+ | |id=chr19:48233021..48233040,+ | ||
|ontology_enrichment_celltype=CL:0000066!8.52e-15!254 | |ontology_enrichment_celltype=CL:0000066!8.52e-15!254 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!6.02e-27!106;DOID:0050687!3.98e-19!143;DOID:162!5.84e-15!235;DOID:14566!3.66e-14!239;DOID:299!1.58e-08!25 | |ontology_enrichment_disease=DOID:305!6.02e-27!106;DOID:0050687!3.98e-19!143;DOID:162!5.84e-15!235;DOID:14566!3.66e-14!239;DOID:299!1.58e-08!25 | ||
|ontology_enrichment_disease_v019=DOID:178;1.46e-08;1!DOID:326;1.46e-08;1!DOID:3978;1.46e-08;1!DOID:3394;1.46e-08;1!DOID:5844;1.46e-08;1!DOID:3111;4.25e-08;1!DOID:6193;4.25e-08;1!DOID:3603;4.25e-08;1!DOID:1749;5.33e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.44e-15,106;DOID:0050687,3.89e-12,143;DOID:178,1.41e-08,1;DOID:326,1.41e-08,1;DOID:3978,1.41e-08,1;DOID:3394,1.41e-08,1;DOID:5844,1.41e-08,1;DOID:3111,3.10e-08,1;DOID:3603,3.10e-08,1;DOID:1749,6.03e-08,14;DOID:162,6.84e-08,235;DOID:6193,7.16e-08,1;DOID:14566,1.20e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0008947!1.90e-09!38;UBERON:0003258!1.90e-09!38;UBERON:0001737!1.99e-08!9;UBERON:0004119!2.00e-08!169;UBERON:0000925!2.00e-08!169;UBERON:0006595!2.00e-08!169;UBERON:0001007!2.02e-08!155;UBERON:0001555!2.02e-08!155;UBERON:0007026!2.02e-08!155;UBERON:0000077!1.93e-07!130;UBERON:0000065!4.46e-07!53;UBERON:0004921!6.66e-07!129;UBERON:0004185!6.66e-07!129;UBERON:0005911!7.81e-07!82 | |ontology_enrichment_uberon=UBERON:0008947!1.90e-09!38;UBERON:0003258!1.90e-09!38;UBERON:0001737!1.99e-08!9;UBERON:0004119!2.00e-08!169;UBERON:0000925!2.00e-08!169;UBERON:0006595!2.00e-08!169;UBERON:0001007!2.02e-08!155;UBERON:0001555!2.02e-08!155;UBERON:0007026!2.02e-08!155;UBERON:0000077!1.93e-07!130;UBERON:0000065!4.46e-07!53;UBERON:0004921!6.66e-07!129;UBERON:0004185!6.66e-07!129;UBERON:0005911!7.81e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0000997;4.25e-08;1!UBERON:0002171;4.25e-08;1!UBERON:0005056;4.25e-08;1!UBERON:0006518;4.25e-08;1!UBERON:0008949;4.25e-08;1!UBERON:0004176;4.25e-08;1!UBERON:0000101;4.25e-08;1!UBERON:0002167;4.25e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,4.11e-08,1;UBERON:0006518,4.11e-08,1;UBERON:0008949,4.11e-08,1;UBERON:0000101,4.11e-08,1;UBERON:0002167,4.11e-08,1;UBERON:0000997,5.07e-08,1;UBERON:0005056,5.07e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,2.09340350391728,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0.221729397462564,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0.24666754841716,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0.236613600079688,0.505754070234305,0.241011029883482,0.220587945464788,0,0.949082476444386,0.943819157121151,0.98110732562673,1.53898862778556,0,0,0,0,0,0,0,0,0,0,0,0,0.201057944823262,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.621984346622316,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0.224262168690721,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.713715955188647,0.473107245101804,0.35142424497814,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0.30239029332968,0,0.306923946576125,0,0.128139149255701,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0.182091168006717,0,0,0,0,1.46139224653261,0,0,0,0,0,0,0.501689773854853,0.254876273045038,0,0,0,0,0,0.656029291399411,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382838137483752,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0.354761064070598,0,0,0,0,0.0962221127255121,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0.962479855263359,2.45040215981032,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0.37428108081644,0,0,0,0,1.19372242368845,0.296964680832639,0.307160702099232,0,0,0,0,0,0.996239941255349,0,0,0,0,0,0.449341755736634,2.50629644545853,0,0.295930216910801,0,0,0,0,0,0,0.874599999961957,0,0.910347586283997,2.2882828526349,0,0,0,0,0,0,0,0,0,0,0.21787692703798,4.46155981691531,0,0,0.23056390438806,0,0.108647371922008,0.957003479195758,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.421996129056054,0.326465616318295,0.706765357169704,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0.586993856796269,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0.853828638089378,0,1.21491816834592,1.17590876897253,1.13176968554523,0,1.0319161948297,0.19351266257817,0.292357268344742,0.164230914106418,0.0969890164884194,0,0,0,0.19871461170299,0,3.91102765469606,0,0.213452994739353,0.19980960958213,0,0,0,0.14405479798815,0,2.59263438078475,0.67952103036807,0,0,0,0,0.136905378891993,0,0,0,0,0,0,3.59422200898184,0.429226048136571,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0.275078873194468,0.415440338029185,0.449947783103001,5.41661368190565,0,0.670869375198532,0.0788057072991982,0.209818352539992,0.316801009558219,0,0.191915197319445,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0,0,1.36869470307464,0.704815022316672,0.106787412567695,0.943225830597996,1.24271716604159,0,0,0,1.27668251554036,0,0,0.306345576763462,0,0.157054096250234,0,0,0,0,0.110929051536852,0,0,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0.398095888698616,0,0,0,0,0.770479321629213,5.36103978437314,0.521988583930423,0,0,0.489473409012935,0.358177682162975,0.617602894321944,0.438568099157414,0,0.964570191354574,0.168942440653073,0,0.345430341731199,0,0,0.584580926518165,0,0,0,0,1.47918486351039,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0.159633859057151,0.205116364240755,0,0,0,0,0,0,0.183428598521679,0,0,0.690359926060101,0,0.0752103283492573,0,0,0.261906694481422,0.818859587550484,0.591424344868181,0,0,0,0,0,0,0,0,0.638812138197976,0,0,0,0,0,0,0.171488009437418,0,0,0.945550727071746,1.77970243027311,0.235479278551542,0,3.08299379645168,0,0.215927591218621,0.47775168788705,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,1.14553434272025,0,0,0,0.098150233615243,3.04794812455674,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0.126166424835079,0,0.126698501011437,0.203977659483963,0.534434810531121,5.05421947441647,0,0,0,0,0,0.426467963801962,0,0,0,0.224263725161227,0.318235791390825,0.202117188958219,0,0,0.0673520530145875,0.286888821570705,1.66330178273007,0.162806537221949,0.106727345877715,0,0.718601616852695,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,2.09340350391728,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0.221729397462564,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0.24666754841716,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0.236613600079688,0.505754070234305,0.241011029883482,0.220587945464788,0,0.949082476444386,0.943819157121151,0.98110732562673,1.53898862778556,0,0,0,0,0,0,0,0,0,0,0,0,0.201057944823262,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.621984346622316,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0.224262168690721,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.713715955188647,0.473107245101804,0.35142424497814,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0.30239029332968,0,0.306923946576125,0,0.128139149255701,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0.182091168006717,0,0,0,0,1.46139224653261,0,0,0,0,0,0,0.501689773854853,0.254876273045038,0,0,0,0,0,0.656029291399411,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382838137483752,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0.354761064070598,0,0,0,0,0.0962221127255121,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0.962479855263359,2.45040215981032,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0.37428108081644,0,0,0,0,1.19372242368845,0.296964680832639,0.307160702099232,0,0,0,0,0,0.996239941255349,0,0,0,0,0,0.449341755736634,2.50629644545853,0,0.295930216910801,0,0,0,0,0,0,0.874599999961957,0,0.910347586283997,2.2882828526349,0,0,0,0,0,0,0,0,0,0,0.21787692703798,4.46155981691531,0,0,0.23056390438806,0,0.108647371922008,0.957003479195758,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.421996129056054,0.326465616318295,0.706765357169704,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0.586993856796269,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0.853828638089378,0,1.21491816834592,1.17590876897253,1.13176968554523,0,1.0319161948297,0.19351266257817,0.292357268344742,0.164230914106418,0.0969890164884194,0,0,0,0.19871461170299,0,3.91102765469606,0,0.213452994739353,0.19980960958213,0,0,0,0.14405479798815,0,2.59263438078475,0.67952103036807,0,0,0,0,0.136905378891993,0,0,0,0,0,0,3.59422200898184,0.429226048136571,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0.275078873194468,0.415440338029185,0.449947783103001,5.41661368190565,0,0.670869375198532,0.0788057072991982,0.209818352539992,0.316801009558219,0,0.191915197319445,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0,0,1.36869470307464,0.704815022316672,0.106787412567695,0.943225830597996,1.24271716604159,0,0,0,1.27668251554036,0,0,0.306345576763462,0,0.157054096250234,0,0,0,0,0.110929051536852,0,0,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0.398095888698616,0,0,0,0,0.770479321629213,5.36103978437314,0.521988583930423,0,0,0.489473409012935,0.358177682162975,0.617602894321944,0.438568099157414,0,0.964570191354574,0.168942440653073,0,0.345430341731199,0,0,0.584580926518165,0,0,0,0,1.47918486351039,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0.159633859057151,0.205116364240755,0,0,0,0,0,0,0.183428598521679,0,0,0.690359926060101,0,0.0752103283492573,0,0,0.261906694481422,0.818859587550484,0.591424344868181,0,0,0,0,0,0,0,0,0.638812138197976,0,0,0,0,0,0,0.171488009437418,0,0,0.945550727071746,1.77970243027311,0.235479278551542,0,3.08299379645168,0,0.215927591218621,0.47775168788705,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,1.14553434272025,0,0,0,0.098150233615243,3.04794812455674,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0.126166424835079,0,0.126698501011437,0.203977659483963,0.534434810531121,5.05421947441647,0,0,0,0,0,0.426467963801962,0,0,0,0.224263725161227,0.318235791390825,0.202117188958219,0,0,0.0673520530145875,0.286888821570705,1.66330178273007,0.162806537221949,0.106727345877715,0,0.718601616852695,0,0,0,0,0,0 | ||
|short_description=p@chr19:48233021..48233040,+ | |short_description=p@chr19:48233021..48233040,+ | ||
}} | }} |
Latest revision as of 15:34, 27 July 2015
Short description: | p@chr19:48233021..48233040, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:48233021..48233040, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 4.11e-08 | 1 |
right lung lobe | 4.11e-08 | 1 |
lower lobe of lung | 4.11e-08 | 1 |
lobe of lung | 4.11e-08 | 1 |
right lung | 4.11e-08 | 1 |
mammalian vulva | 5.07e-08 | 1 |
external female genitalia | 5.07e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.44e-15 | 106 |
cell type cancer | 3.89e-12 | 143 |
vascular disease | 1.41e-08 | 1 |
ischemia | 1.41e-08 | 1 |
extrinsic cardiomyopathy | 1.41e-08 | 1 |
myocardial ischemia | 1.41e-08 | 1 |
myocardial infarction | 1.41e-08 | 1 |
cystadenocarcinoma | 3.10e-08 | 1 |
mucinous cystadenocarcinoma | 3.10e-08 | 1 |
squamous cell carcinoma | 6.03e-08 | 14 |
cancer | 6.84e-08 | 235 |
epithelioid sarcoma | 7.16e-08 | 1 |
disease of cellular proliferation | 1.20e-07 | 239 |