FFCP PHASE1:Hg19::chr19:39402846..39402860,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=643669 | |EntrezGene=643669 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-48bp_to_NM_001243212_5end | |association_with_transcript=-48bp_to_NM_001243212_5end | ||
|cluster_id=chr19:39402846..39402860,- | |||
|coexpression_cluster_id=C347 | |||
|description=CAGE_peak_2_at_LOC643669_5end | |description=CAGE_peak_2_at_LOC643669_5end | ||
|id=chr19:39402846..39402860,- | |id=chr19:39402846..39402860,- | ||
|ontology_enrichment_celltype=CL:0000047!2.19e-11!8;CL:0000540!2.92e-10!6;CL:0000031!2.92e-10!6;CL:0000404!2.92e-10!6;CL:0000133!1.40e-09!59;CL:0000242!8.57e-09!2;CL:0000221!1.86e-07!71 | |ontology_enrichment_celltype=CL:0000047!2.19e-11!8;CL:0000540!2.92e-10!6;CL:0000031!2.92e-10!6;CL:0000404!2.92e-10!6;CL:0000133!1.40e-09!59;CL:0000242!8.57e-09!2;CL:0000221!1.86e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000123;8.11e-41;2!CL:0000242;8.11e-41;2!CL:0000540;4.82e-30;6!CL:0000404;4.82e-30;6!CL:0002319;1.82e-18;25!CL:0000312;5.24e-17;5!CL:0000240;2.41e-14;6!CL:0000311;2.41e-14;6!CL:0000079;2.41e-14;6!CL:0000237;2.41e-14;6!CL:0000362;6.93e-10;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,8.98e-41,2;CL:0000540,5.07e-30,6;CL:0000031,5.07e-30,6;CL:0000404,5.07e-30,6;CL:0000047,1.01e-22,8;CL:0002319,1.88e-18,25;CL:0000312,5.45e-17,5;CL:0000240,2.49e-14,6;CL:0000311,2.49e-14,6;CL:0000079,2.49e-14,6;CL:0000237,2.49e-14,6;CL:0000036,2.49e-14,6;CL:0000357,2.49e-14,6;CL:0000114,2.49e-14,6;CL:0000133,1.25e-11,59;CL:0000362,7.08e-10,9;CL:0000221,1.43e-09,72 | |||
|ontology_enrichment_development_v019=CL:0000031;4.82e-30;6!CL:0000357;2.41e-14;6!CL:0000114;2.41e-14;6 | |||
|ontology_enrichment_disease=DOID:169!1.11e-09!6;DOID:171!1.07e-08!10;DOID:3095!7.89e-07!22;DOID:2994!7.89e-07!22 | |ontology_enrichment_disease=DOID:169!1.11e-09!6;DOID:171!1.07e-08!10;DOID:3095!7.89e-07!22;DOID:2994!7.89e-07!22 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002114;8.02e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002114,8.29e-08,2 | |||
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|short_description=p2@LOC643669 | |short_description=p2@LOC643669 | ||
}} | }} |
Latest revision as of 21:02, 17 September 2015
Short description: | p2@LOC643669 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LOC643669_5end |
Coexpression cluster: | C347_carcinoid_retinoblastoma_neuroblastoma_Mast_Smooth_parietal_Fibroblast |
Association with transcript: | -48bp_to_NM_001243212_5end |
EntrezGene: | LOC643669 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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Merkel cell | 8.98e-41 | 2 |
neuron | 5.07e-30 | 6 |
neuroblast | 5.07e-30 | 6 |
electrically signaling cell | 5.07e-30 | 6 |
neuronal stem cell | 1.01e-22 | 8 |
neural cell | 1.88e-18 | 25 |
keratinocyte | 5.45e-17 | 5 |
stratified squamous epithelial cell | 2.49e-14 | 6 |
keratin accumulating cell | 2.49e-14 | 6 |
stratified epithelial cell | 2.49e-14 | 6 |
keratinizing barrier epithelial cell | 2.49e-14 | 6 |
epithelial fate stem cell | 2.49e-14 | 6 |
stratified epithelial stem cell | 2.49e-14 | 6 |
surface ectodermal cell | 2.49e-14 | 6 |
neurectodermal cell | 1.25e-11 | 59 |
epidermal cell | 7.08e-10 | 9 |
ectodermal cell | 1.43e-09 | 72 |
Ontology term | p-value | n |
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duodenum | 8.29e-08 | 2 |