FFCP PHASE1:Hg19::chr16:77268717..77268723,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:77268717..77268723,+ | |||
|coexpression_cluster_id=C674 | |||
|description=CAGE_peak_at_chr16:77268717..77268723,+ | |description=CAGE_peak_at_chr16:77268717..77268723,+ | ||
|id=chr16:77268717..77268723,+ | |id=chr16:77268717..77268723,+ | ||
|ontology_enrichment_celltype=CL:0002322!6.79e-12!5;CL:0002319!8.46e-08!25;CL:0005020!1.82e-07!6;CL:0002138!1.82e-07!6;CL:0005022!1.82e-07!6;CL:0000133!7.77e-07!59 | |ontology_enrichment_celltype=CL:0002322!6.79e-12!5;CL:0002319!8.46e-08!25;CL:0005020!1.82e-07!6;CL:0002138!1.82e-07!6;CL:0005022!1.82e-07!6;CL:0000133!7.77e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002138;2.95e-20;6!CL:0002573;1.94e-18;2!CL:0002139;5.09e-09;24!CL:0000054;4.09e-08;2!CL:0000137;4.09e-08;2!CL:0000092;4.09e-08;2!CL:0000243;1.40e-07;15!CL:0000125;1.40e-07;15!CL:0000095;7.80e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,5.01e-20,6;CL:0002138,5.01e-20,6;CL:0005022,5.01e-20,6;CL:0002573,1.77e-18,2;CL:0002139,6.04e-09,24;CL:0000054,4.09e-08,2;CL:0000137,4.09e-08,2;CL:0000092,4.09e-08,2;CL:0000243,1.37e-07,15;CL:0000125,1.37e-07,15;CL:0000030,1.37e-07,15;CL:0000339,1.37e-07,15;CL:0000095,7.64e-07,17;CL:0000123,7.64e-07,17 | |||
|ontology_enrichment_development_v019=CL:0005022;2.95e-20;6!UBERON:0003056;1.24e-18;3!CL:0000339;1.40e-07;15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060085;6.21e-15;1!DOID:3165;6.21e-15;1!DOID:0060121;6.21e-15;1!DOID:2438;6.21e-15;1!DOID:4418;6.21e-15;1!DOID:200;4.09e-08;2!DOID:4305;4.09e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,6.22e-15,1;DOID:3165,6.22e-15,1;DOID:0060121,6.22e-15,1;DOID:2438,6.22e-15,1;DOID:4418,6.22e-15,1;DOID:200,4.09e-08,2;DOID:4305,4.09e-08,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001473;2.31e-15;8!UBERON:0004536;2.31e-15;8!UBERON:0006558;2.31e-15;8!UBERON:0000010;1.00e-13;8!UBERON:0002465;2.04e-12;10!UBERON:0000966;1.42e-11;5!UBERON:0005388;1.42e-11;5!UBERON:0001802;1.42e-11;5!UBERON:0002405;4.16e-08;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,3.43e-15,8;UBERON:0004536,3.43e-15,8;UBERON:0006558,3.43e-15,8;UBERON:0000010,8.77e-14,8;UBERON:0002465,2.80e-12,10;UBERON:0000966,7.10e-10,6;UBERON:0005388,7.10e-10,6;UBERON:0001802,7.10e-10,6 | |||
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| ||
|short_description=p@chr16:77268717..77268723,+ | |short_description=p@chr16:77268717..77268723,+ | ||
}} | }} |
Latest revision as of 12:30, 25 July 2015
Short description: | p@chr16:77268717..77268723, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:77268717..77268723, + |
Coexpression cluster: | C674_endometrial_cord_ductal_synovial_adrenal_B_mixed |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 5.01e-20 | 6 |
endothelial cell of lymphatic vessel | 5.01e-20 | 6 |
vascular lymphangioblast | 5.01e-20 | 6 |
Schwann cell | 1.77e-18 | 2 |
endothelial cell of vascular tree | 6.04e-09 | 24 |
bone matrix secreting cell | 4.09e-08 | 2 |
osteocyte | 4.09e-08 | 2 |
osteoclast | 4.09e-08 | 2 |
glial cell (sensu Vertebrata) | 1.37e-07 | 15 |
glial cell | 1.37e-07 | 15 |
glioblast | 1.37e-07 | 15 |
glioblast (sensu Vertebrata) | 1.37e-07 | 15 |
neuron associated cell | 7.64e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 7.64e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 3.43e-15 | 8 |
lymph vasculature | 3.43e-15 | 8 |
lymphatic part of lymphoid system | 3.43e-15 | 8 |
peripheral nervous system | 8.77e-14 | 8 |
lymphoid system | 2.80e-12 | 10 |
retina | 7.10e-10 | 6 |
photoreceptor array | 7.10e-10 | 6 |
posterior segment of eyeball | 7.10e-10 | 6 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 6.22e-15 | 1 |
skin benign neoplasm | 6.22e-15 | 1 |
integumentary system benign neoplasm | 6.22e-15 | 1 |
dermis tumor | 6.22e-15 | 1 |
cutaneous fibrous histiocytoma | 6.22e-15 | 1 |
giant cell tumor | 4.09e-08 | 2 |
bone giant cell tumor | 4.09e-08 | 2 |