FFCP PHASE1:Hg19::chr17:47783699..47783711,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:47783699..47783711,-
|short_description=p4@SLC35B1
|description=CAGE_peak_4_at_SLC35B1_5end
|association_with_transcript=5bp_to_ENST00000508926_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10237 | |EntrezGene=10237 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20798 | |HGNC=20798 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=5bp_to_ENST00000508926_5end | |||
|cluster_id=chr17:47783699..47783711,- | |||
|description=CAGE_peak_4_at_SLC35B1_5end | |||
|id=chr17:47783699..47783711,- | |||
|ontology_enrichment_celltype=CL:0000988!1.35e-08!182;CL:0000037!3.89e-08!172;CL:0000566!3.89e-08!172;CL:0002032!2.95e-07!165;CL:0000837!2.95e-07!165;CL:0000542!6.88e-07!53;CL:0000051!6.88e-07!53 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.48e-10,177;CL:0000037,1.76e-09,168;CL:0002032,4.15e-08,161;CL:0000837,4.15e-08,161;CL:0000542,1.83e-07,53;CL:0000051,1.83e-07,53;CL:0000838,3.42e-07,52 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!5.32e-12!235;DOID:14566!2.61e-11!239;DOID:0050687!1.08e-07!143;DOID:0050686!1.48e-07!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,6.23e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0000178!2.05e-07!15;UBERON:0000179!2.05e-07!15;UBERON:0000463!2.05e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.18e-09;15!UBERON:0000179;1.18e-09;15!UBERON:0000463;1.18e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.55e-10,15;UBERON:0000179,5.55e-10,15;UBERON:0000463,5.55e-10,15 | |||
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| ||
|short_description=p4@SLC35B1 | |||
}} | }} |
Latest revision as of 21:28, 15 September 2015
Short description: | p4@SLC35B1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLC35B1_5end |
Coexpression cluster: | NA |
Association with transcript: | 5bp_to_ENST00000508926_5end |
EntrezGene: | SLC35B1 |
HGNC: | 20798 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.48e-10 | 177 |
hematopoietic stem cell | 1.76e-09 | 168 |
hematopoietic oligopotent progenitor cell | 4.15e-08 | 161 |
hematopoietic multipotent progenitor cell | 4.15e-08 | 161 |
lymphocyte | 1.83e-07 | 53 |
common lymphoid progenitor | 1.83e-07 | 53 |
lymphoid lineage restricted progenitor cell | 3.42e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
blood | 5.55e-10 | 15 |
haemolymphatic fluid | 5.55e-10 | 15 |
organism substance | 5.55e-10 | 15 |
Ontology term | p-value | n |
---|---|---|
cancer | 6.23e-07 | 235 |