FFCP PHASE1:Hg19::chr15:61521667..61521685,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6095 | |EntrezGene=6095 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10258 | |HGNC=10258 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-149bp_to_ENST00000335670_5end | |association_with_transcript=-149bp_to_ENST00000335670_5end | ||
|cluster_id=chr15:61521667..61521685,- | |||
|description=CAGE_peak_7_at_RORA_5end | |description=CAGE_peak_7_at_RORA_5end | ||
|id=chr15:61521667..61521685,- | |id=chr15:61521667..61521685,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000167;1.06e-11;1!CL:0000164;1.06e-11;1!CL:0000502;1.06e-11;1!CL:0000172;1.06e-11;1!CL:0000173;1.06e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,1.06e-11,1;CL:0000164,1.06e-11,1;CL:0000502,1.06e-11,1;CL:0000172,1.06e-11,1;CL:0000173,1.06e-11,1;CL:0002351,1.06e-11,1 | |||
|ontology_enrichment_development_v019=CL:0002351;1.06e-11;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4430;1.06e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.06e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0005743!1.81e-40!86;UBERON:0000073!3.59e-40!94;UBERON:0001016!3.59e-40!94;UBERON:0001049!1.09e-39!57;UBERON:0005068!1.09e-39!57;UBERON:0006241!1.09e-39!57;UBERON:0007135!1.09e-39!57;UBERON:0001017!1.70e-39!82;UBERON:0002346!9.72e-37!90;UBERON:0003075!1.70e-35!86;UBERON:0007284!1.70e-35!86;UBERON:0002616!1.94e-33!59;UBERON:0000955!3.58e-33!69;UBERON:0006238!3.58e-33!69;UBERON:0007023!5.48e-30!115;UBERON:0002780!6.54e-29!41;UBERON:0001890!6.54e-29!41;UBERON:0006240!6.54e-29!41;UBERON:0003080!5.25e-28!42;UBERON:0002020!1.32e-26!34;UBERON:0003528!1.32e-26!34;UBERON:0003056!7.17e-24!61;UBERON:0001893!8.10e-24!34;UBERON:0001869!1.43e-23!32;UBERON:0000924!1.78e-23!173;UBERON:0006601!1.78e-23!173;UBERON:0002791!8.41e-23!33;UBERON:0002619!1.07e-22!22;UBERON:0004121!2.71e-22!169;UBERON:0000956!1.94e-21!25;UBERON:0000203!1.94e-21!25;UBERON:0001950!9.86e-20!20;UBERON:0000033!1.25e-19!123;UBERON:0000153!4.26e-19!129;UBERON:0007811!4.26e-19!129;UBERON:0003076!1.23e-12!15;UBERON:0003057!1.23e-12!15;UBERON:0000025!1.35e-11!194;UBERON:0002298!2.72e-10!8;UBERON:0000119!1.61e-09!312;UBERON:0000483!2.47e-09!309;UBERON:0000349!5.16e-09!5;UBERON:0004733!8.66e-09!12;UBERON:0002028!8.66e-09!12;UBERON:0007277!8.66e-09!12;UBERON:0000064!8.93e-09!219;UBERON:0001872!1.18e-08!5;UBERON:0000475!4.33e-08!365;UBERON:0004732!5.67e-08!13;UBERON:0004111!1.42e-07!241;UBERON:0001871!2.04e-07!7;UBERON:0000477!2.13e-07!286;UBERON:0000481!2.52e-07!347;UBERON:0000922!5.68e-07!612 | |ontology_enrichment_uberon=UBERON:0005743!1.81e-40!86;UBERON:0000073!3.59e-40!94;UBERON:0001016!3.59e-40!94;UBERON:0001049!1.09e-39!57;UBERON:0005068!1.09e-39!57;UBERON:0006241!1.09e-39!57;UBERON:0007135!1.09e-39!57;UBERON:0001017!1.70e-39!82;UBERON:0002346!9.72e-37!90;UBERON:0003075!1.70e-35!86;UBERON:0007284!1.70e-35!86;UBERON:0002616!1.94e-33!59;UBERON:0000955!3.58e-33!69;UBERON:0006238!3.58e-33!69;UBERON:0007023!5.48e-30!115;UBERON:0002780!6.54e-29!41;UBERON:0001890!6.54e-29!41;UBERON:0006240!6.54e-29!41;UBERON:0003080!5.25e-28!42;UBERON:0002020!1.32e-26!34;UBERON:0003528!1.32e-26!34;UBERON:0003056!7.17e-24!61;UBERON:0001893!8.10e-24!34;UBERON:0001869!1.43e-23!32;UBERON:0000924!1.78e-23!173;UBERON:0006601!1.78e-23!173;UBERON:0002791!8.41e-23!33;UBERON:0002619!1.07e-22!22;UBERON:0004121!2.71e-22!169;UBERON:0000956!1.94e-21!25;UBERON:0000203!1.94e-21!25;UBERON:0001950!9.86e-20!20;UBERON:0000033!1.25e-19!123;UBERON:0000153!4.26e-19!129;UBERON:0007811!4.26e-19!129;UBERON:0003076!1.23e-12!15;UBERON:0003057!1.23e-12!15;UBERON:0000025!1.35e-11!194;UBERON:0002298!2.72e-10!8;UBERON:0000119!1.61e-09!312;UBERON:0000483!2.47e-09!309;UBERON:0000349!5.16e-09!5;UBERON:0004733!8.66e-09!12;UBERON:0002028!8.66e-09!12;UBERON:0007277!8.66e-09!12;UBERON:0000064!8.93e-09!219;UBERON:0001872!1.18e-08!5;UBERON:0000475!4.33e-08!365;UBERON:0004732!5.67e-08!13;UBERON:0004111!1.42e-07!241;UBERON:0001871!2.04e-07!7;UBERON:0000477!2.13e-07!286;UBERON:0000481!2.52e-07!347;UBERON:0000922!5.68e-07!612 | ||
|ontology_enrichment_uberon_v019=UBERON:0002426;4.22e-11;1!UBERON:0003831;4.22e-11;1!UBERON:0003898;4.22e-11;1!UBERON:0004830;4.22e-11;1!UBERON:0003830;4.22e-11;1!UBERON:0005175;4.22e-11;1!UBERON:0001774;4.22e-11;1!UBERON:0001103;4.22e-11;1!UBERON:0002784;4.45e-11;4!UBERON:0004733;3.90e-08;12!UBERON:0002028;3.90e-08;12!UBERON:0002298;1.50e-07;6!UBERON:0004732;1.52e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,6.14e-13,56;UBERON:0005068,6.14e-13,56;UBERON:0006241,6.14e-13,56;UBERON:0007135,6.14e-13,56;UBERON:0001017,7.08e-13,81;UBERON:0002346,2.92e-12,86;UBERON:0001016,1.86e-11,89;UBERON:0002426,4.01e-11,1;UBERON:0003831,4.01e-11,1;UBERON:0003898,4.01e-11,1;UBERON:0004830,4.01e-11,1;UBERON:0003830,4.01e-11,1;UBERON:0005175,4.01e-11,1;UBERON:0001774,4.01e-11,1;UBERON:0001103,4.01e-11,1;UBERON:0010084,4.01e-11,1;UBERON:0002784,5.18e-11,4;UBERON:0000073,6.84e-11,53;UBERON:0002616,6.84e-11,53;UBERON:0003076,7.11e-11,15;UBERON:0003057,7.11e-11,15;UBERON:0003075,1.33e-10,82;UBERON:0007284,1.33e-10,82;UBERON:0000955,2.10e-10,68;UBERON:0006238,2.10e-10,68;UBERON:0004733,3.95e-08,12;UBERON:0002028,3.95e-08,12;UBERON:0007277,3.95e-08,12;UBERON:0010371,4.44e-08,104;UBERON:0002298,1.52e-07,6;UBERON:0004732,1.53e-07,13 | |||
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| ||
|short_description=p7@RORA | |short_description=p7@RORA | ||
}} | }} |
Latest revision as of 10:36, 18 September 2015
Short description: | p7@RORA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_RORA_5end |
Coexpression cluster: | NA |
Association with transcript: | -149bp_to_ENST00000335670_5end |
EntrezGene: | RORA |
HGNC: | 10258 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 1.06e-11 | 1 |
enteroendocrine cell | 1.06e-11 | 1 |
type D enteroendocrine cell | 1.06e-11 | 1 |
somatostatin secreting cell | 1.06e-11 | 1 |
pancreatic D cell | 1.06e-11 | 1 |
progenitor cell of endocrine pancreas | 1.06e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
neural tube | 6.14e-13 | 56 |
neural rod | 6.14e-13 | 56 |
future spinal cord | 6.14e-13 | 56 |
neural keel | 6.14e-13 | 56 |
central nervous system | 7.08e-13 | 81 |
neurectoderm | 2.92e-12 | 86 |
nervous system | 1.86e-11 | 89 |
chest muscle | 4.01e-11 | 1 |
respiratory system muscle | 4.01e-11 | 1 |
skeletal muscle of trunk | 4.01e-11 | 1 |
respiratory system skeletal muscle | 4.01e-11 | 1 |
thoracic segment muscle | 4.01e-11 | 1 |
chest organ | 4.01e-11 | 1 |
muscle of trunk | 4.01e-11 | 1 |
diaphragm | 4.01e-11 | 1 |
future diaphragm | 4.01e-11 | 1 |
regional part of diencephalon | 5.18e-11 | 4 |
regional part of nervous system | 6.84e-11 | 53 |
regional part of brain | 6.84e-11 | 53 |
posterior neural tube | 7.11e-11 | 15 |
chordal neural plate | 7.11e-11 | 15 |
neural plate | 1.33e-10 | 82 |
presumptive neural plate | 1.33e-10 | 82 |
brain | 2.10e-10 | 68 |
future brain | 2.10e-10 | 68 |
segmental subdivision of hindbrain | 3.95e-08 | 12 |
hindbrain | 3.95e-08 | 12 |
presumptive hindbrain | 3.95e-08 | 12 |
ecto-epithelium | 4.44e-08 | 104 |
brainstem | 1.52e-07 | 6 |
segmental subdivision of nervous system | 1.53e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.06e-11 | 1 |