FFCP PHASE1:Hg19::chr14:55494294..55494306,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=122809 | |EntrezGene=122809 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19392 | |HGNC=19392 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WXH5 | |UniProt=Q8WXH5 | ||
|association_with_transcript=-38bp_to_ENST00000339298_5end | |association_with_transcript=-38bp_to_ENST00000339298_5end | ||
|cluster_id=chr14:55494294..55494306,+ | |||
|coexpression_cluster_id=C128 | |||
|description=CAGE_peak_7_at_SOCS4_5end | |description=CAGE_peak_7_at_SOCS4_5end | ||
|id=chr14:55494294..55494306,+ | |id=chr14:55494294..55494306,+ | ||
|ontology_enrichment_celltype=CL:0000066!7.47e-15!254;CL:0000148!4.88e-09!10;CL:0000541!4.88e-09!10;CL:0000133!2.62e-08!59;CL:0000147!4.12e-08!14;CL:0002321!6.31e-08!248;CL:0000221!1.82e-07!71;CL:0000710!2.27e-07!20;CL:0000220!3.29e-07!246;CL:0000075!6.26e-07!27;CL:0002322!6.64e-07!5 | |ontology_enrichment_celltype=CL:0000066!7.47e-15!254;CL:0000148!4.88e-09!10;CL:0000541!4.88e-09!10;CL:0000133!2.62e-08!59;CL:0000147!4.12e-08!14;CL:0002321!6.31e-08!248;CL:0000221!1.82e-07!71;CL:0000710!2.27e-07!20;CL:0000220!3.29e-07!246;CL:0000075!6.26e-07!27;CL:0002322!6.64e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002322;3.83e-40;5!CL:0000148;5.33e-20;10!CL:0000039;2.95e-19;7!CL:0000586;2.95e-19;7!CL:0000147;2.95e-14;14!CL:0002321;2.46e-13;15!CL:0000075;3.14e-10;27!CL:0000710;6.22e-10;20!CL:0002591;3.39e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.09e-40,5;CL:0000148,5.78e-20,10;CL:0000541,5.78e-20,10;CL:0000039,2.89e-19,7;CL:0000586,2.89e-19,7;CL:0000147,3.13e-14,14;CL:0000075,3.27e-10,27;CL:0000710,6.47e-10,20;CL:0002591,4.50e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.96e-20;10!UBERON:0005564;1.96e-20;10 | |||
|ontology_enrichment_disease=DOID:0050687!1.16e-13!143;DOID:305!8.19e-12!106;DOID:162!5.74e-07!235 | |ontology_enrichment_disease=DOID:0050687!1.16e-13!143;DOID:305!8.19e-12!106;DOID:162!5.74e-07!235 | ||
|ontology_enrichment_disease_v019=DOID:3095;4.92e-13;22!DOID:2994;4.92e-13;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.52e-13,22;DOID:2994,4.52e-13,22 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;7.06e-17;8!UBERON:0003135;2.52e-12;11!UBERON:0000991;1.19e-09;21!UBERON:0000922;5.81e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.93e-17,8;UBERON:0003135,2.48e-12,11;UBERON:0000991,1.11e-09,21;UBERON:0009196,1.11e-09,21;UBERON:0009117,1.11e-09,21;UBERON:0005564,1.11e-09,21;UBERON:0004176,3.12e-09,22 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0.56530794192401,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0.286836620748814,0.354668382198357,0,0,0,0.311211035399766,0.538842688278752,0,0,0,0,0,0,0,0.23486899728753,0.161872944368132,0.421352420106746,0.408308342509787,0.368502951935304,0.413303124703062,0,0.247266929278557,0,0,0.505008341862199,0,0.277064115484183,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0,0,0.18611685633159,0.337552664482532,0,0,0.0920498986422993,0.323292113637624,0,0,0.339121184620975,0,0.272746120590835,0,3.41526377162867,1.85541675650079,3.137236457477,1.45125477021519,2.01856680700503,1.09493207722749,0,0,0,0,0,0.118306800039844,0,0.964044119533928,0,0.217879444092406,0.237270619111097,0,0.196221465125346,0,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0.201057944823262,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0.380508304469197,0,0,0,0,0,0,0,0.283550194484773,0.268675568108545,0,0,0,0,0,0,0,0.761974731506028,0.381988425558278,1.17217447210047,0,0.925447434329912,2.40274446275134,0.857479297891735,0.224262168690721,0,1.0267360014933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0,0.179060963239896,0,0,0,0,0.76228387266739,1.30139853857622,0,0,0,0,0,0,0.24538298343828,0,0,0.415941723061614,0.356857977594324,0.157702415033935,0.117141414992713,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0,0,0,0,0.154209693802656,0,0.164254312027618,0,0,0.483437798366489,0.200506470303285,0,0,0,0,0,0.0770153371044148,0,1.46139224653261,0.422206515571503,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0.325378394664303,0,0.27470839445503,0.082509499920588,0,0,0,0,0.154048617114644,0.15350367472613,0,0.107420244868274,0,0,0.0890320356467374,0.165284915360978,0,0.382838137483752,0,0,0,0,0,0,0,0.18532421910392,0,0.372158369359667,0.316379424718726,0.190630193923825,0,0,0.318203247925937,0.78494864019923,0.359744915166629,0,0,0.202182481573316,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0,0,0.354761064070598,0,0,0.75894634753143,0.349934720244983,0.0962221127255121,0,0,0,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0,0.284136146806413,0,0,0,0,0,0.445234820091624,0,0.422250816255987,0,0,0,0.306806047506464,0,0,0.179736702294654,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0.787139999965761,0,0.1137934482855,0,0,0.689486746482929,0,0.173624994933292,0,0,0,0.110579259931225,0,0,0.21787692703798,0.278847488557207,0.0769502585037971,0.113942055847001,0,0.269272933229316,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0.865554558968364,0,0,0,0,0,0.104421949505455,0.067401132980677,0,0,0,0,0.728341138602278,0,0,0,0.063186579628488,0.60129367765797,0,0,0.330991955875499,0,0,1.13843818411917,0.138674673013139,0,0.0979923974143777,0.783532859223623,0,0,0.870806981601766,1.75414361006845,1.06750094169172,0,0,0,0.274083849293502,0.397429223405979,0.126621591911757,0.586654148204409,0,0,0,0,0.343609788497747,0,0.14405479798815,0,0,0.135904206073614,0.104602846312333,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0,0,0,0.803765742325096,0.687697182986169,2.49264202817511,0,0,0.0607495566580247,0,0.157611414598396,0.0524545881349981,0.316801009558219,0.179287339332845,0.383830394638891,0,0,0,0,0,0,1.19730191562487,0,0,0.339936274560377,0,0,0.387848869084652,0,0,0.704815022316672,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0.250381861413,0,0,0.0620964029413835,0.138348634936231,0,0,0.285465333544967,0,0.936669811613763,0.144921028610825,0,0.233713309847224,0,0,0.251567901752575,0,0,0,0.466311601748341,0.147855149989634,0.159296767163702,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0.192619830407303,0.214441591374926,0.260994291965212,0,0,0.244736704506468,0.71635536432595,0.926404341482917,0.438568099157414,0.176689145945881,0.192914038270915,0,0.256241518587947,0,0,0,0,0,0,0.655219697692825,0.245772908753719,0,0,0,0,0.567515953566836,0,0,0,0.639471856518258,0.431299245586727,0,0.873677105536111,0,0,0,0,0,0,0,0,0.918736432059601,0,0,0.159633859057151,0,0,0.0691572524642179,0,0,0.196295437002051,0,0,0.577628330751691,0,0.690359926060101,0.198916222116275,0.225630985047772,0,0,0,0.327543835020193,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0.0679697329768317,0.197318320688547,0.354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| ||
|short_description=p7@SOCS4 | |short_description=p7@SOCS4 | ||
}} | }} |
Latest revision as of 15:24, 24 September 2015
Short description: | p7@SOCS4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SOCS4_5end |
Coexpression cluster: | C128_testicular_choriocarcinoma_H9_teratocarcinoma_pancreatic_iPS_HES3GFP |
Association with transcript: | -38bp_to_ENST00000339298_5end |
EntrezGene: | SOCS4 |
HGNC: | 19392 |
UniProt: | Q8WXH5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.09e-40 | 5 |
melanocyte | 5.78e-20 | 10 |
melanoblast | 5.78e-20 | 10 |
germ line cell | 2.89e-19 | 7 |
germ cell | 2.89e-19 | 7 |
pigment cell | 3.13e-14 | 14 |
columnar/cuboidal epithelial cell | 3.27e-10 | 27 |
neurecto-epithelial cell | 6.47e-10 | 20 |
smooth muscle cell of the pulmonary artery | 4.50e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
testis | 6.93e-17 | 8 |
male reproductive organ | 2.48e-12 | 11 |
gonad | 1.11e-09 | 21 |
indifferent external genitalia | 1.11e-09 | 21 |
indifferent gonad | 1.11e-09 | 21 |
gonad primordium | 1.11e-09 | 21 |
external genitalia | 3.12e-09 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.52e-13 | 22 |
germ cell cancer | 4.52e-13 | 22 |