FFCP PHASE1:Hg19::chr17:4365315..4365326,+: Difference between revisions
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|id=chr17:4365315..4365326,+
|short_description=p@chr17:4365315..4365326,+
|description=CAGE_peak_at_chr17:4365315..4365326,+
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:4365315..4365326,+ | |||
|description=CAGE_peak_at_chr17:4365315..4365326,+ | |||
|id=chr17:4365315..4365326,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002127;5.97e-34;1!CL:0000911;5.97e-34;1!CL:0000814;5.97e-34;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,9.85e-34,1;CL:0000914,9.85e-34,1;CL:0000911,9.85e-34,1;CL:0000814,9.85e-34,1;CL:0002042,9.85e-34,1;CL:0002039,9.85e-34,1;CL:0002040,9.85e-34,1;CL:0002041,9.85e-34,1;CL:0000893,1.27e-17,2;CL:0002489,1.27e-17,2;CL:0000809,1.27e-17,2;CL:0000808,1.27e-17,2;CL:0000894,1.27e-17,2;CL:0000806,1.27e-17,2;CL:0000807,1.27e-17,2;CL:0000805,1.27e-17,2;CL:0002425,1.27e-17,2;CL:0002032,9.83e-08,161;CL:0000837,9.83e-08,161;CL:0000037,2.00e-07,168;CL:0000988,4.60e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002425;9.86e-18;2 | |||
|ontology_enrichment_disease=DOID:2531!6.50e-26!51;DOID:0060083!6.50e-26!51;DOID:1240!3.10e-22!39;DOID:8692!9.76e-19!31;DOID:0050686!2.86e-08!137 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.27e-24;39!DOID:2531;1.26e-21;51!DOID:0060083;1.26e-21;51!DOID:8692;1.94e-17;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,9.84e-31,39;DOID:2531,1.20e-23,51;DOID:0060083,1.20e-23,51;DOID:8692,1.20e-17,31;DOID:0050686,5.05e-09,137 | |||
|ontology_enrichment_uberon=UBERON:0004177!2.75e-13!7;UBERON:0002370!2.87e-09!4;UBERON:0005058!2.87e-09!4;UBERON:0009113!2.87e-09!4;UBERON:0003295!2.87e-09!4;UBERON:0005562!2.87e-09!4;UBERON:0002298!2.21e-07!8;UBERON:0007023!5.31e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.70e-09,4;UBERON:0005058,1.70e-09,4;UBERON:0009113,1.70e-09,4;UBERON:0003295,1.70e-09,4;UBERON:0005562,1.70e-09,4;UBERON:0003351,9.49e-07,6 | |||
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| ||
|short_description=p@chr17:4365315..4365326,+ | |||
}} | }} |
Latest revision as of 17:47, 25 July 2015
Short description: | p@chr17:4365315..4365326, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:4365315..4365326, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 9.85e-34 | 1 |
immature NK T cell | 9.85e-34 | 1 |
effector T cell | 9.85e-34 | 1 |
mature NK T cell | 9.85e-34 | 1 |
immature NK T cell stage IV | 9.85e-34 | 1 |
immature NK T cell stage I | 9.85e-34 | 1 |
immature NK T cell stage II | 9.85e-34 | 1 |
immature NK T cell stage III | 9.85e-34 | 1 |
thymocyte | 1.27e-17 | 2 |
double negative thymocyte | 1.27e-17 | 2 |
double-positive, alpha-beta thymocyte | 1.27e-17 | 2 |
DN4 thymocyte | 1.27e-17 | 2 |
DN1 thymic pro-T cell | 1.27e-17 | 2 |
DN2 thymocyte | 1.27e-17 | 2 |
DN3 thymocyte | 1.27e-17 | 2 |
immature single positive thymocyte | 1.27e-17 | 2 |
early T lineage precursor | 1.27e-17 | 2 |
hematopoietic oligopotent progenitor cell | 9.83e-08 | 161 |
hematopoietic multipotent progenitor cell | 9.83e-08 | 161 |
hematopoietic stem cell | 2.00e-07 | 168 |
hematopoietic cell | 4.60e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.70e-09 | 4 |
hemolymphoid system gland | 1.70e-09 | 4 |
thymic region | 1.70e-09 | 4 |
pharyngeal gland | 1.70e-09 | 4 |
thymus primordium | 1.70e-09 | 4 |
pharyngeal epithelium | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
leukemia | 9.84e-31 | 39 |
hematologic cancer | 1.20e-23 | 51 |
immune system cancer | 1.20e-23 | 51 |
myeloid leukemia | 1.20e-17 | 31 |
organ system cancer | 5.05e-09 | 137 |