FFCP PHASE1:Hg19::chr11:829412..829430,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283229 | |EntrezGene=283229 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28703 | |HGNC=28703 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=105bp_to_ENST00000528694_5end | |association_with_transcript=105bp_to_ENST00000528694_5end | ||
|cluster_id=chr11:829412..829430,+ | |||
|coexpression_cluster_id=C108 | |||
|description=CAGE_peak_11_at_EFCAB4A_5end | |description=CAGE_peak_11_at_EFCAB4A_5end | ||
|id=chr11:829412..829430,+ | |id=chr11:829412..829430,+ | ||
|ontology_enrichment_celltype=CL:0002139!9.29e-09!24;CL:0000115!2.58e-08!35;CL:0000071!1.90e-07!18;CL:0002546!1.90e-07!18;CL:0002078!2.33e-07!44;CL:0000213!3.02e-07!57;CL:0000215!3.02e-07!57;CL:1000415!5.02e-07!2 | |ontology_enrichment_celltype=CL:0002139!9.29e-09!24;CL:0000115!2.58e-08!35;CL:0000071!1.90e-07!18;CL:0002546!1.90e-07!18;CL:0002078!2.33e-07!44;CL:0000213!3.02e-07!57;CL:0000215!3.02e-07!57;CL:1000415!5.02e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000511;3.99e-50;1!CL:0002625;3.99e-50;1!CL:0000216;3.99e-50;1!CL:0002144;9.45e-18;3!CL:0002327;8.81e-14;4!CL:0000154;1.44e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,3.99e-50,1;CL:0002625,3.99e-50,1;CL:0000216,3.99e-50,1;CL:0002144,1.12e-17,3;CL:0002327,8.82e-14,4;CL:0000154,1.44e-09,6 | |||
|ontology_enrichment_development_v019=UBERON:0008425;1.46e-50;1!UBERON:0006298;3.99e-50;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5093;8.81e-14;4!DOID:1612;8.81e-14;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,8.82e-14,4;DOID:1612,8.82e-14,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.30e-12!115;UBERON:0002110!1.01e-09!3;UBERON:0006242!1.01e-09!3;UBERON:0006914!2.40e-08!25;UBERON:0005904!7.40e-08!4;UBERON:0000487!9.40e-08!22;UBERON:0001829!1.15e-07!2;UBERON:0001986!1.90e-07!18;UBERON:0004638!1.90e-07!18;UBERON:0004852!1.90e-07!18;UBERON:0003135!8.11e-07!11 | |ontology_enrichment_uberon=UBERON:0007023!1.30e-12!115;UBERON:0002110!1.01e-09!3;UBERON:0006242!1.01e-09!3;UBERON:0006914!2.40e-08!25;UBERON:0005904!7.40e-08!4;UBERON:0000487!9.40e-08!22;UBERON:0001829!1.15e-07!2;UBERON:0001986!1.90e-07!18;UBERON:0004638!1.90e-07!18;UBERON:0004852!1.90e-07!18;UBERON:0003135!8.11e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0001736;3.99e-50;1!UBERON:0001136;3.99e-50;1!UBERON:0001343;3.99e-50;1!UBERON:0004910;3.99e-50;1!UBERON:0004813;3.99e-50;1!UBERON:0001829;7.14e-26;2!UBERON:0004909;7.14e-26;2!UBERON:0010523;9.45e-18;3!UBERON:0001915;9.45e-18;3!UBERON:0001982;9.45e-18;3!UBERON:0001911;8.81e-14;4!UBERON:0005904;1.13e-13;4!UBERON:0000487;4.74e-10;22!UBERON:0001044;1.44e-09;6!UBERON:0003293;1.44e-09;6!UBERON:0003294;1.44e-09;6!UBERON:0010047;1.44e-09;6!UBERON:0003408;1.44e-09;6!UBERON:0000167;1.44e-09;6!UBERON:0006914;5.71e-09;25!UBERON:0002365;1.13e-07;31!UBERON:0002330;1.13e-07;31!UBERON:0000473;1.69e-07;8!UBERON:0000490;3.69e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001736,2.42e-50,1;UBERON:0006298,2.42e-50,1;UBERON:0001136,3.99e-50,1;UBERON:0001343,3.99e-50,1;UBERON:0004910,3.99e-50,1;UBERON:0005154,3.99e-50,1;UBERON:0005295,3.99e-50,1;UBERON:0004813,3.99e-50,1;UBERON:0005297,3.99e-50,1;UBERON:0005294,3.99e-50,1;UBERON:0010141,3.99e-50,1;UBERON:0005891,3.99e-50,1;UBERON:0001829,5.56e-26,2;UBERON:0004909,7.14e-26,2;UBERON:0010523,1.12e-17,3;UBERON:0001915,1.12e-17,3;UBERON:0001982,1.12e-17,3;UBERON:0001911,8.82e-14,4;UBERON:0005333,8.82e-14,4;UBERON:0008425,8.82e-14,4;UBERON:0005311,8.82e-14,4;UBERON:0005904,1.13e-13,4;UBERON:0000487,4.96e-10,22;UBERON:0001044,1.32e-09,6;UBERON:0003293,1.32e-09,6;UBERON:0003294,1.32e-09,6;UBERON:0010047,1.32e-09,6;UBERON:0000167,1.32e-09,6;UBERON:0006914,5.95e-09,25;UBERON:0000076,1.49e-07,8;UBERON:0000473,1.69e-07,8;UBERON:0004871,1.69e-07,8;UBERON:0002365,1.80e-07,31;UBERON:0002330,1.80e-07,31 | |||
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| ||
|short_description=p11@EFCAB4A | |short_description=p11@EFCAB4A | ||
}} | }} |
Latest revision as of 18:50, 24 September 2015
Short description: | p11@EFCAB4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_EFCAB4A_5end |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | 105bp_to_ENST00000528694_5end |
EntrezGene: | EFCAB4A |
HGNC: | 28703 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 3.99e-50 | 1 |
seminiferous tubule epithelial cell | 3.99e-50 | 1 |
Sertoli cell | 3.99e-50 | 1 |
capillary endothelial cell | 1.12e-17 | 3 |
mammary gland epithelial cell | 8.82e-14 | 4 |
protein secreting cell | 1.44e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
submandibular gland | 2.42e-50 | 1 |
submandibular gland primordium | 2.42e-50 | 1 |
mesothelium | 3.99e-50 | 1 |
seminiferous tubule of testis | 3.99e-50 | 1 |
epithelium of male gonad | 3.99e-50 | 1 |
epithelial cord | 3.99e-50 | 1 |
sex cord | 3.99e-50 | 1 |
seminiferous tubule epithelium | 3.99e-50 | 1 |
testis sex cord | 3.99e-50 | 1 |
genital ridge | 3.99e-50 | 1 |
primitive sex cord of indifferent gonad | 3.99e-50 | 1 |
coelomic epithelium | 3.99e-50 | 1 |
major salivary gland | 5.56e-26 | 2 |
epithelium of gonad | 7.14e-26 | 2 |
microcirculatory vessel | 1.12e-17 | 3 |
endothelium of capillary | 1.12e-17 | 3 |
capillary | 1.12e-17 | 3 |
mammary gland | 8.82e-14 | 4 |
mammary bud | 8.82e-14 | 4 |
mammary ridge | 8.82e-14 | 4 |
mammary placode | 8.82e-14 | 4 |
duct of male reproductive system | 1.13e-13 | 4 |
simple squamous epithelium | 4.96e-10 | 22 |
saliva-secreting gland | 1.32e-09 | 6 |
gland of oral region | 1.32e-09 | 6 |
gland of foregut | 1.32e-09 | 6 |
oral gland | 1.32e-09 | 6 |
oral cavity | 1.32e-09 | 6 |
squamous epithelium | 5.95e-09 | 25 |
external ectoderm | 1.49e-07 | 8 |
testis | 1.69e-07 | 8 |
somatic layer of lateral plate mesoderm | 1.69e-07 | 8 |
exocrine gland | 1.80e-07 | 31 |
exocrine system | 1.80e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 8.82e-14 | 4 |
breast cancer | 8.82e-14 | 4 |