FFCP PHASE1:Hg19::chr11:72853550..72853560,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9873 | |EntrezGene=9873 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29114 | |HGNC=29114 | ||
|TSSclassifier=strong | |||
|UniProt=O94868 | |UniProt=O94868 | ||
|association_with_transcript=-244bp_to_ENST00000409418_5end | |association_with_transcript=-244bp_to_ENST00000409418_5end | ||
|cluster_id=chr11:72853550..72853560,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_10_at_FCHSD2_5end | |description=CAGE_peak_10_at_FCHSD2_5end | ||
|id=chr11:72853550..72853560,- | |id=chr11:72853550..72853560,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000333;7.49e-10;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.58e-10;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:171;7.37e-14;10!DOID:3095;1.91e-09;22!DOID:2994;1.91e-09;22!DOID:169;3.24e-08;6!DOID:3307;5.60e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:171,4.09e-14,10;DOID:3095,9.34e-10,22;DOID:2994,9.34e-10,22;DOID:169,2.64e-08,6;DOID:3307,1.89e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.74e-19!115;UBERON:0000073!6.65e-16!94;UBERON:0001016!6.65e-16!94;UBERON:0001017!7.41e-15!82;UBERON:0005743!7.03e-14!86;UBERON:0001049!2.95e-13!57;UBERON:0005068!2.95e-13!57;UBERON:0006241!2.95e-13!57;UBERON:0007135!2.95e-13!57;UBERON:0000955!3.93e-12!69;UBERON:0006238!3.93e-12!69;UBERON:0002346!7.50e-11!90;UBERON:0002616!2.47e-10!59;UBERON:0003080!8.22e-10!42;UBERON:0003075!2.09e-09!86;UBERON:0007284!2.09e-09!86;UBERON:0002780!2.97e-09!41;UBERON:0001890!2.97e-09!41;UBERON:0006240!2.97e-09!41;UBERON:0000924!2.26e-08!173;UBERON:0006601!2.26e-08!173;UBERON:0001893!1.59e-07!34;UBERON:0004121!2.55e-07!169;UBERON:0002791!3.95e-07!33;UBERON:0002020!4.86e-07!34;UBERON:0003528!4.86e-07!34;UBERON:0000153!7.70e-07!129;UBERON:0007811!7.70e-07!129;UBERON:0002619!8.55e-07!22;UBERON:0001869!9.53e-07!32 | |ontology_enrichment_uberon=UBERON:0007023!4.74e-19!115;UBERON:0000073!6.65e-16!94;UBERON:0001016!6.65e-16!94;UBERON:0001017!7.41e-15!82;UBERON:0005743!7.03e-14!86;UBERON:0001049!2.95e-13!57;UBERON:0005068!2.95e-13!57;UBERON:0006241!2.95e-13!57;UBERON:0007135!2.95e-13!57;UBERON:0000955!3.93e-12!69;UBERON:0006238!3.93e-12!69;UBERON:0002346!7.50e-11!90;UBERON:0002616!2.47e-10!59;UBERON:0003080!8.22e-10!42;UBERON:0003075!2.09e-09!86;UBERON:0007284!2.09e-09!86;UBERON:0002780!2.97e-09!41;UBERON:0001890!2.97e-09!41;UBERON:0006240!2.97e-09!41;UBERON:0000924!2.26e-08!173;UBERON:0006601!2.26e-08!173;UBERON:0001893!1.59e-07!34;UBERON:0004121!2.55e-07!169;UBERON:0002791!3.95e-07!33;UBERON:0002020!4.86e-07!34;UBERON:0003528!4.86e-07!34;UBERON:0000153!7.70e-07!129;UBERON:0007811!7.70e-07!129;UBERON:0002619!8.55e-07!22;UBERON:0001869!9.53e-07!32 | ||
|ontology_enrichment_uberon_v019=UBERON:0000013;7.49e-10;5!UBERON:0002410;7.49e-10;5!UBERON:0000010;3.64e-08;8!UBERON:0002346;2.46e-07;4!UBERON:0000923;2.46e-07;4!UBERON:0010316;2.46e-07;4!UBERON:0005291;2.46e-07;4!UBERON:0002370;5.60e-07;2!UBERON:0003714;5.60e-07;2!UBERON:0005162;5.60e-07;2!UBERON:0000122;5.60e-07;2!UBERON:0005058;5.60e-07;2!UBERON:0009113;5.60e-07;2!UBERON:0001016;6.81e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.63e-13,89;UBERON:0000013,5.83e-10,5;UBERON:0002410,5.83e-10,5;UBERON:0002346,2.69e-09,86;UBERON:0001017,4.36e-09,81;UBERON:0004121,1.38e-08,171;UBERON:0000924,1.38e-08,171;UBERON:0006601,1.38e-08,171;UBERON:0007023,1.44e-08,114;UBERON:0000010,2.73e-08,8;UBERON:0001049,1.32e-07,56;UBERON:0005068,1.32e-07,56;UBERON:0006241,1.32e-07,56;UBERON:0007135,1.32e-07,56;UBERON:0003714,2.76e-07,2;UBERON:0000073,5.43e-07,53;UBERON:0002616,5.43e-07,53;UBERON:0005162,8.15e-07,2;UBERON:0000122,8.15e-07,2;UBERON:0003075,8.59e-07,82;UBERON:0007284,8.59e-07,82 | |||
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| ||
|short_description=p10@FCHSD2 | |short_description=p10@FCHSD2 | ||
}} | }} |
Latest revision as of 02:31, 20 September 2015
Short description: | p10@FCHSD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_FCHSD2_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -244bp_to_ENST00000409418_5end |
EntrezGene: | FCHSD2 |
HGNC: | 29114 |
UniProt: | O94868 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 1.63e-13 | 89 |
sympathetic nervous system | 5.83e-10 | 5 |
autonomic nervous system | 5.83e-10 | 5 |
neurectoderm | 2.69e-09 | 86 |
central nervous system | 4.36e-09 | 81 |
ectoderm-derived structure | 1.38e-08 | 171 |
ectoderm | 1.38e-08 | 171 |
presumptive ectoderm | 1.38e-08 | 171 |
adult organism | 1.44e-08 | 114 |
peripheral nervous system | 2.73e-08 | 8 |
neural tube | 1.32e-07 | 56 |
neural rod | 1.32e-07 | 56 |
future spinal cord | 1.32e-07 | 56 |
neural keel | 1.32e-07 | 56 |
neural tissue | 2.76e-07 | 2 |
regional part of nervous system | 5.43e-07 | 53 |
regional part of brain | 5.43e-07 | 53 |
multi cell component structure | 8.15e-07 | 2 |
neuron projection bundle | 8.15e-07 | 2 |
neural plate | 8.59e-07 | 82 |
presumptive neural plate | 8.59e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 4.09e-14 | 10 |
germ cell and embryonal cancer | 9.34e-10 | 22 |
germ cell cancer | 9.34e-10 | 22 |
neuroendocrine tumor | 2.64e-08 | 6 |
teratoma | 1.89e-07 | 2 |