FFCP PHASE1:Hg19::chr11:66050086..66050106,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=254263 | |EntrezGene=254263 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28744 | |HGNC=28744 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=21bp_to_ENST00000531936_5end | |association_with_transcript=21bp_to_ENST00000531936_5end | ||
|cluster_id=chr11:66050086..66050106,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_5_at_CNIH2_5end | |description=CAGE_peak_5_at_CNIH2_5end | ||
|id=chr11:66050086..66050106,+ | |id=chr11:66050086..66050106,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.90e-17;10!UBERON:0005564;5.90e-17;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.55e-42!57;UBERON:0005068!8.55e-42!57;UBERON:0006241!8.55e-42!57;UBERON:0007135!8.55e-42!57;UBERON:0001893!2.41e-41!34;UBERON:0002616!2.94e-40!59;UBERON:0001869!1.14e-38!32;UBERON:0002780!1.35e-38!41;UBERON:0001890!1.35e-38!41;UBERON:0006240!1.35e-38!41;UBERON:0003080!1.29e-37!42;UBERON:0002791!1.64e-37!33;UBERON:0000955!5.94e-37!69;UBERON:0006238!5.94e-37!69;UBERON:0002020!2.43e-36!34;UBERON:0003528!2.43e-36!34;UBERON:0007023!6.58e-31!115;UBERON:0001017!1.54e-30!82;UBERON:0002619!1.85e-30!22;UBERON:0005743!6.01e-29!86;UBERON:0001950!1.41e-27!20;UBERON:0000956!1.04e-26!25;UBERON:0000203!1.04e-26!25;UBERON:0003075!2.00e-26!86;UBERON:0007284!2.00e-26!86;UBERON:0000073!7.64e-26!94;UBERON:0001016!7.64e-26!94;UBERON:0002346!4.49e-25!90;UBERON:0003056!5.27e-25!61;UBERON:0000033!4.62e-21!123;UBERON:0000153!6.98e-20!129;UBERON:0007811!6.98e-20!129;UBERON:0004121!1.32e-12!169;UBERON:0001871!1.32e-12!7;UBERON:0000924!3.24e-12!173;UBERON:0006601!3.24e-12!173;UBERON:0002298!6.38e-12!8;UBERON:0000025!8.21e-12!194;UBERON:0000349!8.67e-12!5;UBERON:0002021!9.32e-12!5;UBERON:0002420!5.05e-11!9;UBERON:0007245!5.05e-11!9;UBERON:0010009!5.05e-11!9;UBERON:0010011!5.05e-11!9;UBERON:0000454!5.05e-11!9;UBERON:0002308!5.61e-11!9;UBERON:0000125!5.61e-11!9;UBERON:0000200!8.98e-10!6;UBERON:0000988!8.23e-09!3;UBERON:0001896!1.05e-08!3;UBERON:0005290!1.05e-08!3;UBERON:0010096!1.05e-08!3;UBERON:0004111!1.30e-08!241;UBERON:0009663!1.97e-08!7;UBERON:0004733!5.38e-08!12;UBERON:0002028!5.38e-08!12;UBERON:0007277!5.38e-08!12;UBERON:0002581!1.18e-07!1;UBERON:0001882!1.25e-07!1;UBERON:0005403!1.25e-07!1;UBERON:0002902!1.95e-07!1;UBERON:0009899!1.95e-07!1;UBERON:0004732!2.18e-07!13;UBERON:0002022!2.21e-07!1;UBERON:0000477!2.31e-07!286;UBERON:0003112!2.35e-07!1;UBERON:0000032!2.35e-07!1;UBERON:0005253!2.35e-07!1;UBERON:0003128!2.35e-07!1;UBERON:0002241!2.35e-07!1;UBERON:0001703!2.35e-07!1;UBERON:0004761!2.35e-07!1;UBERON:0009617!2.35e-07!1;UBERON:0002336!3.20e-07!1;UBERON:0001018!3.20e-07!1;UBERON:0002473!3.20e-07!1;UBERON:0005340!3.20e-07!1;UBERON:0002316!3.20e-07!1;UBERON:0003544!3.20e-07!1;UBERON:0001020!3.20e-07!1;UBERON:0005970!3.20e-07!1;UBERON:0002437!3.20e-07!1;UBERON:0000369!3.85e-07!4;UBERON:0002435!3.85e-07!4;UBERON:0000204!3.85e-07!4;UBERON:0010082!3.85e-07!4;UBERON:0007190!4.61e-07!1;UBERON:0000064!6.17e-07!219;UBERON:0000475!7.76e-07!365 | |ontology_enrichment_uberon=UBERON:0001049!8.55e-42!57;UBERON:0005068!8.55e-42!57;UBERON:0006241!8.55e-42!57;UBERON:0007135!8.55e-42!57;UBERON:0001893!2.41e-41!34;UBERON:0002616!2.94e-40!59;UBERON:0001869!1.14e-38!32;UBERON:0002780!1.35e-38!41;UBERON:0001890!1.35e-38!41;UBERON:0006240!1.35e-38!41;UBERON:0003080!1.29e-37!42;UBERON:0002791!1.64e-37!33;UBERON:0000955!5.94e-37!69;UBERON:0006238!5.94e-37!69;UBERON:0002020!2.43e-36!34;UBERON:0003528!2.43e-36!34;UBERON:0007023!6.58e-31!115;UBERON:0001017!1.54e-30!82;UBERON:0002619!1.85e-30!22;UBERON:0005743!6.01e-29!86;UBERON:0001950!1.41e-27!20;UBERON:0000956!1.04e-26!25;UBERON:0000203!1.04e-26!25;UBERON:0003075!2.00e-26!86;UBERON:0007284!2.00e-26!86;UBERON:0000073!7.64e-26!94;UBERON:0001016!7.64e-26!94;UBERON:0002346!4.49e-25!90;UBERON:0003056!5.27e-25!61;UBERON:0000033!4.62e-21!123;UBERON:0000153!6.98e-20!129;UBERON:0007811!6.98e-20!129;UBERON:0004121!1.32e-12!169;UBERON:0001871!1.32e-12!7;UBERON:0000924!3.24e-12!173;UBERON:0006601!3.24e-12!173;UBERON:0002298!6.38e-12!8;UBERON:0000025!8.21e-12!194;UBERON:0000349!8.67e-12!5;UBERON:0002021!9.32e-12!5;UBERON:0002420!5.05e-11!9;UBERON:0007245!5.05e-11!9;UBERON:0010009!5.05e-11!9;UBERON:0010011!5.05e-11!9;UBERON:0000454!5.05e-11!9;UBERON:0002308!5.61e-11!9;UBERON:0000125!5.61e-11!9;UBERON:0000200!8.98e-10!6;UBERON:0000988!8.23e-09!3;UBERON:0001896!1.05e-08!3;UBERON:0005290!1.05e-08!3;UBERON:0010096!1.05e-08!3;UBERON:0004111!1.30e-08!241;UBERON:0009663!1.97e-08!7;UBERON:0004733!5.38e-08!12;UBERON:0002028!5.38e-08!12;UBERON:0007277!5.38e-08!12;UBERON:0002581!1.18e-07!1;UBERON:0001882!1.25e-07!1;UBERON:0005403!1.25e-07!1;UBERON:0002902!1.95e-07!1;UBERON:0009899!1.95e-07!1;UBERON:0004732!2.18e-07!13;UBERON:0002022!2.21e-07!1;UBERON:0000477!2.31e-07!286;UBERON:0003112!2.35e-07!1;UBERON:0000032!2.35e-07!1;UBERON:0005253!2.35e-07!1;UBERON:0003128!2.35e-07!1;UBERON:0002241!2.35e-07!1;UBERON:0001703!2.35e-07!1;UBERON:0004761!2.35e-07!1;UBERON:0009617!2.35e-07!1;UBERON:0002336!3.20e-07!1;UBERON:0001018!3.20e-07!1;UBERON:0002473!3.20e-07!1;UBERON:0005340!3.20e-07!1;UBERON:0002316!3.20e-07!1;UBERON:0003544!3.20e-07!1;UBERON:0001020!3.20e-07!1;UBERON:0005970!3.20e-07!1;UBERON:0002437!3.20e-07!1;UBERON:0000369!3.85e-07!4;UBERON:0002435!3.85e-07!4;UBERON:0000204!3.85e-07!4;UBERON:0010082!3.85e-07!4;UBERON:0007190!4.61e-07!1;UBERON:0000064!6.17e-07!219;UBERON:0000475!7.76e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0003127;6.30e-21;2!UBERON:0000007;6.30e-21;2!UBERON:0000473;6.64e-21;8!UBERON:0003135;1.62e-15;11!UBERON:0003296;3.60e-11;4!UBERON:0010133;3.60e-11;4!UBERON:0000991;1.27e-08;21!UBERON:0003101;2.82e-08;22!UBERON:0000079;2.82e-08;22!UBERON:0003126;6.21e-07;7!UBERON:0001894;6.21e-07;7!UBERON:0001005;6.21e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,5.70e-21,2;UBERON:0000473,6.64e-21,8;UBERON:0000007,6.96e-21,2;UBERON:0003135,1.62e-15,11;UBERON:0003296,3.79e-11,4;UBERON:0010133,3.79e-11,4;UBERON:0000991,1.27e-08,21;UBERON:0009196,1.27e-08,21;UBERON:0009117,1.27e-08,21;UBERON:0005564,1.27e-08,21;UBERON:0004176,2.82e-08,22;UBERON:0003101,2.82e-08,22;UBERON:0000079,2.82e-08,22;UBERON:0003126,6.04e-07,7;UBERON:0001005,6.04e-07,7;UBERON:0001894,6.39e-07,7;UBERON:0006222,6.39e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.33996642519167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0.556608588971108,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0.182248669974074,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.213574825135389,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385375350578757,0,0,0.41023272848151,0.252071696221718,0.207471757392654,0.161475645631851,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,1.21393120847326,0,0,0,0,0.135939465953663,0.394636641377094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339957450954573,0,0,0,0,0,0,0,0,0,0,0,0,7.42631242538746,12.058385857028,0,0,0,0,0,0,0,0,0,0,0,0,1.64961072403156,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.33996642519167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0.556608588971108,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0.182248669974074,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.213574825135389,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385375350578757,0,0,0.41023272848151,0.252071696221718,0.207471757392654,0.161475645631851,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,1.21393120847326,0,0,0,0,0.135939465953663,0.394636641377094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339957450954573,0,0,0,0,0,0,0,0,0,0,0,0,7.42631242538746,12.058385857028,0,0,0,0,0,0,0,0,0,0,0,0,1.64961072403156,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p5@CNIH2 | |short_description=p5@CNIH2 | ||
}} | }} |
Latest revision as of 13:33, 19 September 2015
Short description: | p5@CNIH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CNIH2_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 21bp_to_ENST00000531936_5end |
EntrezGene: | CNIH2 |
HGNC: | 28744 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 5.70e-21 | 2 |
testis | 6.64e-21 | 8 |
pituitary gland | 6.96e-21 | 2 |
male reproductive organ | 1.62e-15 | 11 |
gland of diencephalon | 3.79e-11 | 4 |
neuroendocrine gland | 3.79e-11 | 4 |
gonad | 1.27e-08 | 21 |
indifferent external genitalia | 1.27e-08 | 21 |
indifferent gonad | 1.27e-08 | 21 |
gonad primordium | 1.27e-08 | 21 |
external genitalia | 2.82e-08 | 22 |
male organism | 2.82e-08 | 22 |
male reproductive system | 2.82e-08 | 22 |
trachea | 6.04e-07 | 7 |
respiratory airway | 6.04e-07 | 7 |
diencephalon | 6.39e-07 | 7 |
future diencephalon | 6.39e-07 | 7 |