FFCP PHASE1:Hg19::chr11:50257731..50257764,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000525654_5end | |association_with_transcript=0bp_to_ENST00000525654_5end | ||
|cluster_id=chr11:50257731..50257764,+ | |||
|coexpression_cluster_id=C2135 | |||
|description=CAGE_peak_1_at_ENST00000525654_5end | |description=CAGE_peak_1_at_ENST00000525654_5end | ||
|id=chr11:50257731..50257764,+ | |id=chr11:50257731..50257764,+ | ||
|ontology_enrichment_celltype=CL:0000039!2.69e-08!7;CL:0000586!2.69e-08!7 | |ontology_enrichment_celltype=CL:0000039!2.69e-08!7;CL:0000586!2.69e-08!7 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.87e-27;7!CL:0000586;1.87e-27;7!CL:0000054;2.58e-07;2!CL:0000137;2.58e-07;2!CL:0000092;2.58e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.81e-27,7;CL:0000586,1.81e-27,7;CL:0000054,2.58e-07,2;CL:0000137,2.58e-07,2;CL:0000092,2.58e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.94e-19;10!UBERON:0005564;1.94e-19;10!UBERON:0003124;8.15e-13;1 | |||
|ontology_enrichment_disease=DOID:1036!7.33e-07!8 | |ontology_enrichment_disease=DOID:1036!7.33e-07!8 | ||
|ontology_enrichment_disease_v019=DOID:3095;1.76e-13;22!DOID:2994;1.76e-13;22!DOID:0060085;2.32e-13;1!DOID:3165;2.32e-13;1!DOID:0060121;2.32e-13;1!DOID:2438;2.32e-13;1!DOID:4418;2.32e-13;1!DOID:200;2.58e-07;2!DOID:4305;2.58e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.76e-13,22;DOID:2994,1.76e-13,22;DOID:0060085,2.32e-13,1;DOID:3165,2.32e-13,1;DOID:0060121,2.32e-13,1;DOID:2438,2.32e-13,1;DOID:4418,2.32e-13,1;DOID:200,2.58e-07,2;DOID:4305,2.58e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0003135!1.23e-07!11;UBERON:0000473!2.74e-07!8 | |ontology_enrichment_uberon=UBERON:0003135!1.23e-07!11;UBERON:0000473!2.74e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.26e-24;8!UBERON:0003135;1.06e-17;11!UBERON:0001282;3.14e-13;1!UBERON:0009842;3.14e-13;1!UBERON:0003704;3.14e-13;1!UBERON:0001171;3.14e-13;1!UBERON:0001172;3.14e-13;1!UBERON:0000991;2.18e-09;21!UBERON:0003101;5.72e-09;22!UBERON:0000079;5.72e-09;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.08e-24,8;UBERON:0003135,1.02e-17,11;UBERON:0001282,2.95e-13,1;UBERON:0009842,2.95e-13,1;UBERON:0003704,2.95e-13,1;UBERON:0001171,2.95e-13,1;UBERON:0001172,2.95e-13,1;UBERON:0000991,2.14e-09,21;UBERON:0009196,2.14e-09,21;UBERON:0009117,2.14e-09,21;UBERON:0005564,2.14e-09,21;UBERON:0004176,5.61e-09,22;UBERON:0003101,5.61e-09,22;UBERON:0000079,5.61e-09,22;UBERON:0003133,1.50e-08,48;UBERON:0005156,7.03e-07,59;UBERON:0000990,7.03e-07,59 | |||
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| ||
|short_description=p1@ENST00000525654 | |short_description=p1@ENST00000525654 | ||
}} | }} |
Latest revision as of 22:46, 23 July 2015
Short description: | p1@ENST00000525654 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000525654_5end |
Coexpression cluster: | C2135_testis_testicular_small_cholangiocellular_fibrous_chronic_thyroid |
Association with transcript: | 0bp_to_ENST00000525654_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.81e-27 | 7 |
germ cell | 1.81e-27 | 7 |
bone matrix secreting cell | 2.58e-07 | 2 |
osteocyte | 2.58e-07 | 2 |
osteoclast | 2.58e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 3.08e-24 | 8 |
male reproductive organ | 1.02e-17 | 11 |
intralobular bile duct | 2.95e-13 | 1 |
acinus | 2.95e-13 | 1 |
intrahepatic bile duct | 2.95e-13 | 1 |
portal lobule | 2.95e-13 | 1 |
hepatic acinus | 2.95e-13 | 1 |
gonad | 2.14e-09 | 21 |
indifferent external genitalia | 2.14e-09 | 21 |
indifferent gonad | 2.14e-09 | 21 |
gonad primordium | 2.14e-09 | 21 |
external genitalia | 5.61e-09 | 22 |
male organism | 5.61e-09 | 22 |
male reproductive system | 5.61e-09 | 22 |
reproductive organ | 1.50e-08 | 48 |
reproductive structure | 7.03e-07 | 59 |
reproductive system | 7.03e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.76e-13 | 22 |
germ cell cancer | 1.76e-13 | 22 |
organ system benign neoplasm | 2.32e-13 | 1 |
skin benign neoplasm | 2.32e-13 | 1 |
integumentary system benign neoplasm | 2.32e-13 | 1 |
dermis tumor | 2.32e-13 | 1 |
cutaneous fibrous histiocytoma | 2.32e-13 | 1 |
giant cell tumor | 2.58e-07 | 2 |
bone giant cell tumor | 2.58e-07 | 2 |